CK937797

Overview
NameCK937797
Unique NameCK937797
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7102 contig Csv1_Contig7102:146..884. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.418e-35
Identity = 75/177 (42.37%), Postives = 103/177 (58.19%), Query Frame = 2
Query:  200 NETISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAHD 730
            ++ IS       FE     RN     A GF+ Y++FITAT  +    FGTTG    + KEI AFLA    +T+ G+  A  GP +WG CYN E      YC  S ++  PC PG +Y+GRG I I +NYNYGA G A+  +LLN+P+ +  +A ++F+ A+W WMT  ++  PSAHD
Sbjct:    2 SQNISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFA--AFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQW--PCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMT-AQQPKPSAHD 173          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.418e-35
Identity = 70/165 (42.42%), Postives = 96/165 (58.18%), Query Frame = 2
Query:  233 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAH 727
            QF++    RN     A GF+ Y +FITA   +   GFGTTG    + KE+ AF      +T+ G+  A  GP +WG C+  E +P+  YC+ S   T+PC  G  YYGRG + + WNYNYG  G A+  DLLN+P+ +  +A +AF+AAIW WMT  +   PS H
Sbjct:   94 QFDDMLKHRNDAACPARGFYTYNAFITAAKSFP--GFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSA--TWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMT-AQPPKPSCH 253          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.418e-35
Identity = 71/169 (42.01%), Postives = 97/169 (57.40%), Query Frame = 2
Query:  233 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAHDAFV 739
            QF++    RN     A GF+ Y +FI A   +   GFGTTG    + KEI AF      +T+ G+  A  GP +WG C+  E +PS +YC  S ++  PC  G  YYGRG + + WNYNYG  G A+ +DLLN+P+ +  +  +AF+AAIW WMTP +   PS H   V
Sbjct:   79 QFDDMLKHRNDNACPARGFYTYDAFINAAKSFP--GFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEW--PCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTP-QSPKPSCHAVIV 242          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.200e-34
Identity = 69/165 (41.82%), Postives = 97/165 (58.79%), Query Frame = 2
Query:  236 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAHD 730
            F+     RN P   A GF+ Y +F+ A   +    FGTTG+   + +E+ AFL     +T+ G+  A  GP AWG C+  E +PS +YC  S +Y  PC PG  YYGRG + + WNYNYG  GEAL+ +LL +P+ +  +  L+F+ A+W WMTP +   PS HD
Sbjct:   11 FDQMLKHRNNPACPAKGFYTYDAFLAAAKSFP--SFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRY--PCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTP-QAPKPSCHD 170          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.955e-34
Identity = 70/169 (41.42%), Postives = 96/169 (56.80%), Query Frame = 2
Query:  236 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAHDAFV 739
            F      RN     A GF+ Y +FI A   +    F TTG +  + +EI AFLA    +T+ G G  A  GP AWG CYN E++P  SYC     Y  PC PG +Y+GRG + + WNYNYG  G A+  DLLN+P+ +  + T++F++A W WMTP +   PS H+  +
Sbjct:   61 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP-QSPKPSCHNVII 224          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.955e-34
Identity = 70/169 (41.42%), Postives = 96/169 (56.80%), Query Frame = 2
Query:  236 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAHDAFV 739
            F      RN     A GF+ Y +FI A   +    F TTG +  + +EI AFLA    +T+ G G  A  GP AWG CYN E++P  SYC     Y  PC PG +Y+GRG + + WNYNYG  G A+  DLLN+P+ +  + T++F++A W WMTP +   PS H+  +
Sbjct:   83 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP-QSPKPSCHNVII 246          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.327e-33
Identity = 70/165 (42.42%), Postives = 96/165 (58.18%), Query Frame = 2
Query:  236 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAHD 730
            F+     RN       GF+ Y +FI A   +   GFGTTG    K KE+ AFLA    +T+ G+  A  GP AWG C+  E +  + YC       +PC PG +YYGRG I +  NYNYG  G+A+K DL+N+P+ +  N T++F+ AIW WMTP + + PS+HD
Sbjct:   89 FDQMLKYRNDGRCAGHGFYTYDAFIAAARSFN--GFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPK---DWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTP-QANKPSSHD 247          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.860e-33
Identity = 68/168 (40.48%), Postives = 98/168 (58.33%), Query Frame = 2
Query:  236 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAHDAFV 739
            + + F  ++     A GF+ Y SF+ A  ++    F  TG    + +E+ AFLA +  +T+ G+  A  GP AWGLCY  E++P  SYCD + K  +PC PG  Y+GRG I I WN+NYG  G+AL  D L +PE +   + +AF+ A+W WMTP + + PS H   V
Sbjct:   58 YASLFLHKDDAACPARGFYTYASFVRAATRFPR--FAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQ-WPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTP-RDTKPSCHQVMV 221          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.916e-32
Identity = 68/165 (41.21%), Postives = 95/165 (57.58%), Query Frame = 2
Query:  236 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAHD 730
            F+     RN     A GF+ Y +FI A   Y    FG TG    + +EI AFL     +T+ G+  A  GP AWG C+  E +PS +YC  + ++  PC PG +YYGRG I I WNYNYG  G A+  DLLN P+ +  ++ ++F++A+W WMT  +   PS+HD
Sbjct:   85 FDQMLKHRNDGACPAKGFYTYDAFIAAAKAYP--SFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-TYCSATPQF--PCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMT-AQSPKPSSHD 243          
BLAST of CK937797 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.502e-32
Identity = 68/165 (41.21%), Postives = 95/165 (57.58%), Query Frame = 2
Query:  236 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSXPSAHD 730
            F+     RN     A GF+ Y +FI A   Y    FG TG    + +EI AFL     +T+ G+  A  GP AWG C+  E +PS +YC  + ++  PC PG +YYGRG I I WNYNYG  G A+  DLLN P+ +  ++ ++F++A+W WMT  +   PS+HD
Sbjct:   84 FDQVLKHRNDGACPAKGFYTYDAFIAAAKAYP--SFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-AYCSATPQF--PCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMT-AQSPKPSSHD 242          
The following BLAST results are available for this feature:
BLAST of CK937797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CHID_SOLLC1.418e-3542.37Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHIB_ARATH1.418e-3542.42Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]
CHI2_BRANA1.418e-3542.01Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHIT_CARPA1.200e-3441.82Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI2_GOSHI5.955e-3441.42Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI1_GOSHI5.955e-3441.42Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHIX_PEA1.327e-3342.42Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHI10_ORYSJ3.860e-3340.48Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIT_PHAVU1.916e-3241.21Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHI5_PHAVU2.502e-3241.21Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004481_H07 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIIF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937797 ID=CK937797; Name=CK937797; organism=Citrus sinensis; type=EST; length=739bp
AGGGAGATCTGGTGAGAACGAGAAAATGAAGATGAAGAATGGCAGTGTGG
CAATGACACTGACAGTGGCACTAGTACTGGCACTGGCAGTGAGTTTGGCA
AATGGAGATGAATCAGAGAAGGTGATAGTGAAGAAGTTGAAGGGGAAAAA
AGTTTGCATAAAAGGGTGGGAGTGCCCAACATGGTCGAAATTCTGCTGTA
ACGAGACGATATCAGACTATTTCCAGGTTTACCAGTTTGAGAATTTCTTC
TCGAAAAGGAACACGCCGGTGGCACATGCCGTGGGATTCTGGGATTATCA
GTCTTTCATTACTGCCACCGTCAAATATCAGCCCCTCGGCTTCGGTACCA
CCGGTACTAAGCTTGATAAGATGAAGGAGATTTGCGCTTTTCTTGCCCAC
GTGGGCTGCAAGACCTCTTGTGGATATGGAGTGGCCACTGGAGGACCATT
GGCCTGGGGACTTTGCTACAACCATGAAATGAGCCCCAGTCAGTCATATT
GTGATGATTCCTACAAATACACATATCCCTGCACCCCTGGAGCTGAGTAC
TATGGCCGAGGTGCTATACCTATATACTGGAACTATAACTATGGAGCCAC
TGGGGAAGCATTGAAGGCAGATCTGTTGAATCATCCCGAATACATTGAGC
AGAATGCTACCCTTGCCTTTGAGGCTGCAATTTGGAAGTGGATGACCCCA
GTCAAGAAATCNNNGCCTTCAGCCCATGATGCCTTTGTT
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