CX675375
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675375 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 3.153e-54 Identity = 100/171 (58.48%), Postives = 125/171 (73.10%), Query Frame = -2 Query: 55 NFGNYVFLSNIYSPSHKGNDAAKIRSMMGDKGIQKIRGCSWVEVDGVFHEFLVGDNSPPLFEKIYSKLEELATKLKAAGFVPTTDHVFFDIEEEEKQYFFACPREKLALAFGFIPTVPKEVIGIAKNLGVCGDCQEAIKLISKIPGREIIVRDNNRFHCFMEGSCSCKDFW 567 N GNYV LSNIYS + ++AA++R MM KG++KI G SW+E++G HEFL D S PL +KIY+KLE+L +++ GFVPTT+ VFFD+EEEEK+ EKLA+A G I T +VI + KNL VCGDC E +KLISKI REI+VRDNNRFHCF GSCSC D+W Sbjct: 515 NAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
BLAST of CX675375 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.468e-43 Identity = 87/171 (50.88%), Postives = 113/171 (66.08%), Query Frame = -2 Query: 55 NFGNYVFLSNIYSPSHKGNDAAKIRSMMGDKGIQKIRGCSWVEVDGVFHEFLVGDNSPPLFEKIYSKLEELATKLKAAGFVPTTDHVFFDIEEEEKQYFFACPREKLALAFGFIPTVPKEVIGIAKNLGVCGDCQEAIKLISKIPGREIIVRDNNRFHCFMEGSCSCKDFW 567 N G+YV LSNIY+ + + N+ AK R+++ DKG++K+ GCS +E+D V HEF++GD P +IY LEE+ L+ AGFVP T V ++EEE K+ EKLA+AFG I T P + I KNL VC +C EA KLISKI REII RD RFH F +G CSC D+W Sbjct: 571 NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of CX675375 vs. ExPASy Swiss-Prot
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.120e-42 Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = -2 Query: 55 GNYVFLSNIYSPSHKGNDAAKIRSMMGDKGIQKIRGCSWVEVDGVFHEFLVGDNSPPLFEKIYSKLEELATKLKAAGFVPTTDHVFFDIEEEEKQYFFACPREKLALAFGFIPTVPKEVIGIAKNLGVCGDCQEAIKLISKIPGREIIVRDNNRFHCFMEGSCSCKDFW 561 G +V L NIY+ + NDAA++R M + G++K CSWVE++ H F+ D P E+I K EE+ K+K G+VP T HV ++++E++ EK+ALAF + T P I I KN+ VCGDC AIKL SK+ GREIIVRD NRFH F +G+CSCKD+W Sbjct: 465 GPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
BLAST of CX675375 vs. ExPASy Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 6.168e-42 Identity = 83/171 (48.54%), Postives = 114/171 (66.67%), Query Frame = -2 Query: 55 NFGNYVFLSNIYSPSHKGNDAAKIRSMMGDKGIQKIRGCSWVEVDGVFHEFLVGDNSPPLFEKIYSKLEELATKLKAAGFVPTTDHVFFDIEEEEKQYFFACPREKLALAFGFIPTVPKEVIGIAKNLGVCGDCQEAIKLISKIPGREIIVRDNNRFHCFMEGSCSCKDFW 567 N G YV LSN+Y+ + + + IR M KGI K+ GCS+VEV+GV HEF+VGD S E+IY+ L+E+ +L+ AG+V T V D+ E++K+ + EKLA+AF + T P + I KNL +CGDC +K+ISK+ REI+VRD NRFH F +GSCSC+DFW Sbjct: 403 NSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
BLAST of CX675375 vs. ExPASy Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 3.061e-41 Identity = 81/169 (47.93%), Postives = 112/169 (66.27%), Query Frame = -2 Query: 55 GNYVFLSNIYSPSHKGNDAAKIRSMMGDKGIQKIRGCSWVEVDGVFHEFLVGDNSPPLFEKIYSKLEELATKLKAAGFVPTTDHVFFDIEEEEKQYFFACPREKLALAFGFIPTVPKEVIGIAKNLGVCGDCQEAIKLISKIPGREIIVRDNNRFHCFMEGSCSCKDFW 561 G+YV LSN+Y+ + +D KIR M G++K+ G S VEV HEFL+GD S P + IY+KL+E+ +L++ G+VP +V+ D+EEEEK+ EK+A+AF I T + I + KNL VC DC AIKL+SK+ REI+VRD +RFH F GSCSC+D+W Sbjct: 427 GDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of CX675375 vs. ExPASy Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.420e-40 Identity = 83/168 (49.40%), Postives = 111/168 (66.07%), Query Frame = -2 Query: 55 YVFLSNIYSPSHKGNDAAKIRSMMGDKGIQKIRGCSWVEVDGVFHEFLVGDNSPPLFEKIYSKLEELATKLKAAGFVPTTDHVFFDIEEEEKQYFFACPREKLALAFGFIPTVPKEVIGIAKNLGVCGDCQEAIKLISKIPGREIIVRDNNRFHCF-MEGSCSCKDFW 555 YV LSN+Y+ S + AK+R +M ++ ++K G SW+EV + FL GD S PL ++IY KLE+L+T+LK G+ P T +V DI++E K+ A E+LA+AFG I T + I KNL VCGDC IKLI+KI REI+VRD+NRFH F +G CSC DFW Sbjct: 701 YVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
BLAST of CX675375 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 5.773e-40 Identity = 80/171 (46.78%), Postives = 109/171 (63.74%), Query Frame = -2 Query: 55 NFGNYVFLSNIYSPSHKGNDAAKIRSMMGDKGIQKIRGCSWVEVDGVFHEFLVGDNSPPLFEKIYSKLEELATKLKAAGFVPTTDHVFFDIEEEEKQYFFACPREKLALAFGFIPTVPKEVIGIAKNLGVCGDCQEAIKLISKIPGREIIVRDNNRFHCFMEGSCSCKDFW 567 N G YV LSN+Y+ S + D K+R M DKG++K+ G SW+E+ H F VGD P ++I++ LEEL ++K AG+V T V D+EEEEK+ E+LA+A+G + I + KNL VC DC AIK +++I GR II+RDNNRFH F +GSCSC D+W Sbjct: 611 NSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
BLAST of CX675375 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 9.847e-40 Identity = 84/172 (48.84%), Postives = 108/172 (62.79%), Query Frame = -2 Query: 55 NFGNYVFLSNIYSPSHKGNDAAKIRSMMGDKGIQKIRGCSWVEVDGVFHEFLVGDNSPPLFEKIYSKLEELATKLKAAGFVPTTDHVFFDIEEEE-KQYFFACPREKLALAFGFIPTVPKEVIGIAKNLGVCGDCQEAIKLISKIPGREIIVRDNNRFHCFMEGSCSCKDFW 567 N G +V LSNIY+ K + +++R M G++K GCS +E+DG+ HEFL GDN+ P+ EK+Y KL E+ KLK+ G+ P V IEEEE K+ EKLA+ +G I T +VI + KNL VCGDC KLIS++ REIIVRD RFH F G CSC DFW Sbjct: 567 NDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of CX675375 vs. ExPASy Swiss-Prot
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.865e-39 Identity = 80/171 (46.78%), Postives = 106/171 (61.99%), Query Frame = -2 Query: 55 NFGNYVFLSNIYSPSHKGNDAAKIRSMMGDKGIQKIRGCSWVEVDGVFHEFLVGDNSPPLFEKIYSKLEELATKLKAAGFVPTTDHVFFDIEEEEKQYFFACPREKLALAFGFIPTVPKEVIGIAKNLGVCGDCQEAIKLISKIPGREIIVRDNNRFHCFMEGSCSCKDFW 567 N G Y+ LS+IY+ + + D ++R +M ++G+ K G S +E++G H FL+GD P EKIY L EL KL AG+V T V D++EEEK+ EKLA+AFG + TVP + + KNL VC DC IKLISKI RE +VRD RFH F +G CSC D+W Sbjct: 489 NCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
BLAST of CX675375 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 6.382e-39 Identity = 79/169 (46.75%), Postives = 111/169 (65.68%), Query Frame = -2 Query: 55 GNYVFLSNIYSPSHKGNDAAKIRSMMGDKGIQKIRGCSWVEVDGVFHEFLVGDNSPPLFEKIYSKLEELATKLKAAGFVPTTDHVFFDIEEEEKQYFFACPREKLALAFGFIPTVPKEVIGIAKNLGVCGDCQEAIKLISKIPGREIIVRDNNRFHCFMEGSCSCKDFW 561 G YV LSN+Y+ ++ +++R M +K I+K GCS +++DGV HEF+V D+S P ++I S L E++ KL+ AG+ P T V ++EEE+K+ EK+A AFG I T P + I I KNL +C DC +IKLISK+ R+I VRD RFH F +GSCSC D+W Sbjct: 478 GAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646 The following BLAST results are available for this feature:
BLAST of CX675375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675375 ID=CX675375; Name=CX675375; organism=Citrus sinensis; type=EST; length=568bpback to top |