CK937785

Overview
NameCK937785
Unique NameCK937785
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig126 contig Csv1_Contig126:46..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK937785 vs. ExPASy Swiss-Prot
Match: USPAL_ARATH (Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 6.431e-70
Identity = 123/165 (74.55%), Postives = 145/165 (87.88%), Query Frame = 1 
Query:   22 MEGEPTRIIVAVNESTIKGYPHASISSRGAFEWSVQKIIRSNTSGFKLLFLHVQVPDEDGFDDMDSIYASPEDFRRMQHRDKVRGLHLLEYFVNRCHEIGVACEAWIKKGDPKEVICREVQRVQPDLLVVGSRGLGPFQRVFVGTVSEFCVKHAECPVITIKRRA 516
            M  EPT+++VAVN STIK YP+ SIS + AFEW+++KI+RSNTS FK+L LHVQV DEDGFDD+DSIYASPEDFR M+  +K +GLHLLE+FVN+CHEIGV CEAWIK GDPK+VIC+EV+RV+PD LVVGSRGLG FQ+VFVGTVS FCVKHAECPV+TIKR A
Sbjct:    1 MGSEPTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDGFDDVDSIYASPEDFRDMRQSNKAKGLHLLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIKRNA 165
The following BLAST results are available for this feature:
BLAST of CK937785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
USPAL_ARATH6.431e-7074.55Universal stress protein A-like protein OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004482_A05 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937785 ID=CK937785; Name=CK937785; organism=Citrus sinensis; type=EST; length=847bp
GGGGACACTGAGCGAGTGAAAATGGAAGGCGAGCCGACTCGGATAATAGT
GGCGGTGAACGAGTCGACGATAAAAGGTTACCCGCACGCGTCGATTAGCA
GCAGAGGAGCGTTCGAGTGGAGCGTGCAGAAGATCATTCGCTCTAACACT
TCTGGCTTCAAGCTTCTCTTTCTCCACGTCCAGGTTCCCGATGAAGATGG
TTTTGATGATATGGATAGCATATATGCATCTCCTGAAGATTTCAGACGCA
TGCAGCACAGGGACAAAGTGAGAGGACTTCATCTTCTGGAGTATTTTGTC
AACAGATGTCATGAGATTGGGGTAGCTTGTGAAGCATGGATTAAGAAAGG
AGATCCCAAAGAAGTAATCTGCCGCGAAGTGCAACGTGTCCAGCCAGATC
TCCTGGTTGTGGGAAGTCGGGGACTTGGTCCTTTTCAGAGGGTCTTTGTT
GGGACTGTGAGTGAATTTTGTGTGAAGCATGCTGAGTGCCCTGTGATAAC
CATTAAACGTAGGGCAGATGAAACTCCTGAGGACCCTGTTGATGACTGAA
CTGATCACTATCTCAATATTTTTCATCCTGTTGATAAACTTTGGACAGAA
AACGTTAGTTGGGGGAGATATTAAATGTACTGCTTAGAAATACTTGTCTA
TTTGTTGAGAATATATTGCCTGGACGAATATGCTTTGTAATCTGTTAAAT
GGGTCCGCCTAAGTTACATTCAATGTAACTTACGGCCAGCATGTAAAAAT
TCATTCAGCCCCCCATATTCTATGTTATTTATATTTTATTCGTAAGTATT
ATAAAACTTTAGGATTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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