CX675373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675373 vs. ExPASy Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 7.491e-71 Identity = 125/216 (57.87%), Postives = 168/216 (77.78%), Query Frame = 3 Query: 3 PYASTVGSLMFAMICTRPDIAQAVGAVSRYMANPGGEHWITVKRILRYIRGTSDVVLCYGGSEFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHKQQKIPVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTKENLADVLTKPINTDKFVWSRSSCGL 650 PY+S VGSLM+AM+CTRPDIA AVG VSR++ NPG EHW VK ILRY+RGT+ LC+GGS+ ++GY D+D AGD+D RKS+TGY+FT +G A+SW SKLQ VALSTTEAEY+AAT+ KE IW++R L+ELG Q++ V+CDSQSA+ +++N +H+RTKHI V+YH++RE+V+D S+ + KI T EN AD+LTK + +KF + G+ Sbjct: 1110 PYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325
BLAST of CX675373 vs. ExPASy Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3) HSP 1 Score: 182.185 bits (461), Expect = 3.169e-45 Identity = 96/223 (43.05%), Postives = 139/223 (62.33%), Query Frame = 3 Query: 3 PYASTVGSLMFAMICTRPDIAQAVGAVSRYMANPGGEHWITVKRILRYIRGTSDVVLCYGGS---EFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGA-AVSWVSKLQTVVALSTTEAEYMAATQACKEAIWIQRLLEELGHK-QQKIPVFCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEDGSVDLQKIHTKENLADVLTKPINTDKFVWSRSSCGLAE 656 P S +G LM+ M+CTRPD+ AV +SRY + E W +KR+LRY++GT D+ L + + E + GYVDSD+AG RKSTTGY+F + + W +K Q VA S+TEAEYMA +A +EA+W++ LL + K + I ++ D+Q + IA NP+ H R KHI ++YHF RE V++ + L+ I T+ LAD+ TKP+ +FV R GL + Sbjct: 1180 PCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGLLQ 1402
BLAST of CX675373 vs. ExPASy Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae GN=TY5A PE=4 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 3.091e-16 Identity = 50/126 (39.68%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 3 PYASTVGSLMFAMICTRPDIAQAVGAVSRYMANPGGEHWITVKRILRYIRGTSDVVLCY-GGSEFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVS-KLQTVVALSTTEAEYMAATQACKE 374 PY S VG L+F RPDI+ V +SR++ P H + +R+LRY+ T + L Y GS+ + Y D+ D ST GYV LAGA V+W S KL+ V+ + +TEAEY+ A++ E Sbjct: 182 PYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYITASETVME 307
BLAST of CX675373 vs. ExPASy Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.299e-14 Identity = 47/127 (37.01%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 6 YASTVGSLMFAMICTRPDIAQAVGAVSRYMANPGGEHWITVKRILRYIRGTS-DVVLCYGGSEFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMAATQACKEAIW 383 + S VG+L + + TRPDI+ AV V + M P + +KR+LRY++GT + + S+ V+ + DSD+AG R+STTG+ L +SW +K Q V+ S+TE EY A E W Sbjct: 100 FRSIVGALQYLTL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225 The following BLAST results are available for this feature:
BLAST of CX675373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675373 ID=CX675373; Name=CX675373; organism=Citrus sinensis; type=EST; length=838bpback to top |