CK937781

Overview
NameCK937781
Unique NameCK937781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10775 contig Csv1_Contig10775:1077..1824. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METB_ARATH (Cystathionine gamma-synthase, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=2 SV=3)

HSP 1 Score: 417.927 bits (1073), Expect = 2.854e-116
Identity = 200/247 (80.97%), Postives = 222/247 (89.88%), Query Frame = 1
Query:    7 LPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDN 747
            LP +GIT TVIDP  + GLEAA+N   VSLFFTESPTNPFLRCVD++LVS +CHK+G +VCIDGTFATPLNQKAL+LGADLV+HSATK+IGGHNDVLAG I GS KLV++IRNLHHVLGG LNPNAAYLIIRGMKTLHLRVQQQNSTA RMA+ILEAHPKV  V+YPGL SHPEH +A +QMTGFGGVVSFE+DGD+  T+KF+D+LKIPYIAPSFGGCESIVDQPAIMSYWDL Q ERLKYGI DN
Sbjct:  292 LPKLGITVTVIDPADIAGLEAAVNEFKVSLFFTESPTNPFLRCVDIELVSKICHKRGTLVCIDGTFATPLNQKALALGADLVVHSATKYIGGHNDVLAGCICGSLKLVSEIRNLHHVLGGTLNPNAAYLIIRGMKTLHLRVQQQNSTAFRMAEILEAHPKVSHVYYPGLPSHPEHELAKRQMTGFGGVVSFEIDGDIETTIKFVDSLKIPYIAPSFGGCESIVDQPAIMSYWDLPQEERLKYGIKDN 538          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METC_LACLM (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metC PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.132e-49
Identity = 99/248 (39.92%), Postives = 162/248 (65.32%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            VL   GI   ++D   ++ L+AA      +++F E+P+NP L+ +D+K +S +     A+  +D TFATP  Q+ ++LGAD+VLHSATK++GGH+DV+AG ++  S++L ++I  L + +G  L P  ++L+ RG+KTL LR++  ++ A ++A+ LE    V +V+YPGL SHP H IA +QM+ FGG++SFE+  D  A   F++ L    +A S GG ES+++ PA+M++  + +  R + GI D
Sbjct:  109 VLTKTGIIYDLVDLSNLDDLKAAFKEETKAIYF-ETPSNPLLKVLDIKEISAIAKAHDALTLVDNTFATPYLQQPIALGADIVLHSATKYLGGHSDVVAGLVTTNSKELASEIGFLQNSIGAVLGPQDSWLVQRGIKTLALRMEAHSANAQKIAEFLETSKAVSKVYYPGLNSHPGHEIAKKQMSAFGGMISFELT-DENAVKDFVENLSYFTLAESLGGVESLIEVPAVMTHASIPKELREEIGIKD 354          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METC_LACLA (Cystathionine beta-lyase OS=Lactococcus lactis subsp. lactis GN=metC PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.132e-49
Identity = 99/248 (39.92%), Postives = 162/248 (65.32%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            VL   GI   ++D   ++ L+AA      +++F E+P+NP L+ +D+K +S +     A+  +D TFATP  Q+ ++LGAD+VLHSATK++GGH+DV+AG ++  S++L ++I  L + +G  L P  ++L+ RG+KTL LR++  ++ A ++A+ LE    V +V+YPGL SHP H IA +QM+ FGG++SFE+  D  A   F++ L    +A S GG ES+++ PA+M++  + +  R + GI D
Sbjct:  109 VLTKTGIIYDLVDLSNLDDLKAAFKEETKAIYF-ETPSNPLLKVLDIKEISAIAKAHDALTLVDNTFATPYLQQPIALGADIVLHSATKYLGGHSDVVAGLVTTNSKELASEIGFLQNSIGAVLGPQDSWLVQRGIKTLALRMEAHSANAQKIAEFLETSKAVSKVYYPGLNSHPGHEIAKKQMSAFGGMISFELT-DENAVKDFVENLSYFTLAESLGGVESLIEVPAVMTHASIPKELREEIGIKD 354          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METC_COXBU (Cystathionine beta-lyase OS=Coxiella burnetii GN=metC PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.703e-49
Identity = 91/219 (41.55%), Postives = 148/219 (67.58%), Query Frame = 1
Query:   94 LFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGY--ISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            + + ESP+NP L+ VD+  ++++  +K  I   D TFATP+ Q+ L LG D+V HSATK++ GH+D++ G   +  ++ L  Q++ L + +G    P  +++++RG+KTL +R+++    A+++A+ LE HPKVKRV+YPGL SHP+H IA +QM  FGG++S E+  DL  T K ++  ++  +A S GG ES+++ PAIM++  + Q+ER K GI D
Sbjct:  146 MLWVESPSNPRLKIVDLAKIAEIAKEKNIIAVADNTFATPIIQRPLELGFDIVTHSATKYLNGHSDIIGGVAVVGDNKTLAEQLKYLQNAIGAIAAPFDSFMVLRGLKTLAIRMERHCENAMQLAQWLEKHPKVKRVYYPGLPSHPQHSIAKKQMRYFGGMISVELKCDLNETKKVLERCQLFTLAESLGGVESLIEHPAIMTHASIPQAERQKLGITD 364          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: CGL_DICDI (Cystathionine gamma-lyase OS=Dictyostelium discoideum GN=cysA PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.493e-48
Identity = 92/237 (38.82%), Postives = 149/237 (62.87%), Query Frame = 1
Query:   37 IDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            +D   ++ L+ A  +    L + E+PTNP L+  D+K V+D  H +GA + +D TF +P  Q  L LGAD+V+HS TK+I GH+D + G ++  +++L  +++ L + +G   +P   +L +RG+KTLH+R++     A  +   LE HPKV+RV YPGL SHP+H I  +QM G+GG+V F V G +  +  F++ +K+  +A S GG ES+++ P++M++  +   ER K GI D
Sbjct:  126 VDLSTLDDLKNAFTDKT-RLVWIETPTNPLLKVADIKAVADYVHSRGATLVVDNTFMSPYFQNPLDLGADIVMHSVTKYINGHSDCVMGVLATNNDELYAKLKFLQNSIGAVPSPFDCFLALRGLKTLHVRMEAHQKNAFAICNFLEKHPKVERVIYPGLPSHPQHEICKRQMKGYGGMVVFFVKGSIDQSRSFLENIKLFALAESLGGVESLIELPSVMTHASVPAEERAKLGISD 361          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: MCCB_BACSU (Cystathionine gamma-lyase OS=Bacillus subtilis GN=mccB PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.547e-48
Identity = 98/248 (39.52%), Postives = 158/248 (63.71%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAG-YISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            VL  +GI +T +D    E +E A+  N  +++  E+PTNP L+  D+ L++D+  K G ++ +D TF TP  Q+ L+LGAD+VLHSATK++GGH+DV+ G  ++ S++L  ++  + +  GG L P  ++L++RG+KTL LR++  +  A ++A  LE HP V+ ++YPG  +HP H +A  Q  GFGG++SF++ G       F+  LK+  IA S G  ES++  PA M++  + +  RL+ GI D
Sbjct:  108 VLNRLGIESTFVDTSSREEVEKAIRPNTKAIYI-ETPTNPLLKITDLTLMADIAKKAGVLLIVDNTFNTPYFQQPLTLGADIVLHSATKYLGGHSDVVGGLVVTASKELGEELHFVQNSTGGVLGPQDSWLLMRGIKTLGLRMEAIDQNARKIASFLENHPAVQTLYYPGSSNHPGHELAKTQGAGFGGMISFDI-GSEERVDAFLGNLKLFTIAESLGAVESLISVPARMTHASIPRERRLELGITD 353          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METC_LACLC (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris GN=metC PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.674e-48
Identity = 99/248 (39.92%), Postives = 160/248 (64.52%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYI-SGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            VL   GI   ++D   +E L+AA      +++F E+P+NP L+ +D+K +S +     A+  +D TFATP  Q+ ++LGAD+VLHSATK++GGH+DV+AG + + S +L  +I  L + +G  L P  ++L+ RG+KTL  R++  ++ A ++A+ LEA   V +V+YPGL +H  H IA +QMT FGG++SFE+  D  A   F++ L+   +A S GG ES+++ PA+M++  + +  R + GI D
Sbjct:  109 VLTKTGIIYDLVDLSNLEDLKAAFKAETKAVYF-ETPSNPLLKVLDIKEISSIAKAHNALTLVDNTFATPYLQQPIALGADIVLHSATKYLGGHSDVVAGLVTTNSNELAIEIGFLQNSIGAVLGPQDSWLVQRGIKTLAPRMEAHSANAQKIAEFLEASQAVSKVYYPGLVNHEGHEIAKKQMTAFGGMISFELT-DENAVKNFVENLRYFTLAESLGGVESLIEVPAVMTHASIPKELREEIGIKD 354          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METB_HELPY (Cystathionine gamma-synthase OS=Helicobacter pylori GN=metB PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.411e-48
Identity = 98/248 (39.52%), Postives = 156/248 (62.90%), Query Frame = 1
Query:    4 VLPTMGITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYIS-GSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            VL   G++ T+ID   +  ++ A+  N  +L+  E+P+NP L+  D+   + +    G +  +D TFATP  Q  L LGAD+V HS TK++GGH+DV+AG ++  +E L  +I    + +GG L P  ++L+ RG+KTL LR++     AL +A+ LE HPKV+RV+YPGL +HP + +A +QM GF G++SF +  D  A + F+++LK+  +  S GG ES+V  PA M++  + +++R   GI D
Sbjct:  108 VLVKNGLSCTIIDTSDISQIKKAIKPNTKALYL-ETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPLLLGADIVAHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVERVYYPGLPTHPNYELAKKQMRGFSGMLSFTLKNDSEA-VAFVESLKLFILGESLGGVESLVGIPAFMTHACIPKTQREAAGIRD 353          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: MEGL_PSEPU (Methionine gamma-lyase OS=Pseudomonas putida GN=mdeA PE=1 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 5.311e-46
Identity = 97/244 (39.75%), Postives = 152/244 (62.30%), Query Frame = 1
Query:   19 GITATVIDPXXMEGLEAALNNNNVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYISGSEKLVTQIR--NLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMD 744
            G+    +D   ++ LEAA+      ++F ESP NP +   D+  V+ +  K GA V +D T+ TP  Q+ L LGADLV+HSATK++ GH D+ AG + GS+ LV +IR   L  + G  L+P+ A L++RG+KTL+LR+ +  + A  +A+ L   P+V+ +HYPGL S P++ +A QQM+  GG+++FE+ G + A  +F++AL++   A S G  ES+   PA M++   +  ER  YGI +
Sbjct:  129 GVKLRHVDMADLQALEAAMTPATRVIYF-ESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISE 371          
BLAST of CK937781 vs. ExPASy Swiss-Prot
Match: METZ_PSEAE (O-succinylhomoserine sulfhydrylase OS=Pseudomonas aeruginosa GN=metZ PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.636e-45
Identity = 87/221 (39.37%), Postives = 139/221 (62.90%), Query Frame = 1
Query:   85 NVSLFFTESPTNPFLRCVDVKLVSDLCHKKGAIVCIDGTFATPLNQKALSLGADLVLHSATKFIGGHNDVLAGYISGSEKLVTQIRNLHHVLGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAKILEAHPKVKRVHYPGLKSHPEHHIATQQMTGFGGVVSFEVDGDLTATMKFIDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSERLKYGIMDN 747
            N  LFF ESP+NP    VD+  ++++ H KGA++ +D  F TP  Q+ L LGAD+V+HSATK+I G    + G ++G  + + ++       G  L+P  A+L ++G++TL +R+Q  +++AL +A+ LE  P ++RV+Y GL SHP+H +A +Q +GFG VVSF+V G   A  +FIDA ++  I  + G  ++ +  PA  S+  LS  +R + GI D+
Sbjct:  158 NTKLFFVESPSNPLAELVDIAALAEIAHAKGALLAVDNCFCTPALQQPLKLGADVVIHSATKYIDGQGRGMGGVVAGRGEQMKEVVGFLRTAGPTLSPFNAWLFLKGLETLRIRMQAHSASALALAEWLERQPGIERVYYAGLPSHPQHELARRQQSGFGAVVSFDVKGGRDAAWRFIDATRMVSITTNLGDTKTTIAHPATTSHGRLSPEDRARAGIGDS 378          
The following BLAST results are available for this feature:
BLAST of CK937781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
METB_ARATH2.854e-11680.97Cystathionine gamma-synthase, chloroplastic OS=Ara... [more]
METC_LACLM5.132e-4939.92Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METC_LACLA5.132e-4939.92Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METC_COXBU6.703e-4941.55Cystathionine beta-lyase OS=Coxiella burnetii GN=m... [more]
CGL_DICDI1.493e-4838.82Cystathionine gamma-lyase OS=Dictyostelium discoid... [more]
MCCB_BACSU2.547e-4839.52Cystathionine gamma-lyase OS=Bacillus subtilis GN=... [more]
METC_LACLC5.674e-4839.92Cystathionine beta-lyase OS=Lactococcus lactis sub... [more]
METB_HELPY7.411e-4839.52Cystathionine gamma-synthase OS=Helicobacter pylor... [more]
MEGL_PSEPU5.311e-4639.75Methionine gamma-lyase OS=Pseudomonas putida GN=md... [more]
METZ_PSEAE2.636e-4539.37O-succinylhomoserine sulfhydrylase OS=Pseudomonas ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004482_A01 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937781 ID=CK937781; Name=CK937781; organism=Citrus sinensis; type=EST; length=748bp
GGGGTTCTGCCCACAATGGGAATCACGGCTACGGTGATTGACCCNNNNNN
TATGGAAGGTTTGGAGGCAGCACTCAACAATAACAATGTCTCACTATTCT
TCACCGAGTCTCCAACCAATCCATTCCTGAGATGTGTGGATGTCAAACTG
GTTTCAGATCTTTGCCATAAGAAAGGAGCAATAGTTTGCATAGATGGAAC
CTTCGCCACACCTCTCAATCAGAAGGCCCTCAGCCTTGGTGCTGATCTTG
TACTGCACTCTGCAACAAAATTCATTGGTGGCCACAATGATGTCCTTGCT
GGGTACATTAGTGGTTCAGAGAAGTTAGTTACACAAATTCGTAATTTGCA
TCATGTTTTGGGTGGTGCTCTCAACCCGAATGCCGCGTATTTGATCATTC
GAGGCATGAAGACATTGCATCTTCGTGTACAGCAACAAAATTCAACTGCG
TTGAGGATGGCCAAGATTTTAGAGGCACATCCAAAGGTGAAGCGCGTTCA
CTATCCAGGCTTGAAGAGTCATCCTGAGCATCACATTGCCACACAGCAAA
TGACTGGTTTTGGTGGGGTAGTTAGTTTTGAGGTTGATGGAGACCTAACG
GCCACCATGAAATTTATTGATGCCTTGAAAATCCCATATATTGCTCCATC
CTTCGGTGGCTGTGAGAGCATTGTTGATCAGCCAGCTATAATGTCGTATT
GGGACCTTAGCCAATCGGAGAGGCTCAAGTATGGGATTATGGATAACT
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