EY665897

Overview
NameEY665897
Unique NameEY665897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665897 vs. ExPASy Swiss-Prot
Match: MORC3_HUMAN (MORC family CW-type zinc finger protein 3 OS=Homo sapiens GN=MORC3 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 8.820e-15
Identity = 57/175 (32.57%), Postives = 88/175 (50.29%), Query Frame = 2
Query:   38 GTRIIIYNLWEDDQGLLELDFDSDKHDI-------QLRGVNRDEQNIKMAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNIVNDMMLSKKVTYRPQPGASGILTDLHMAVDVTIGFVKDAKHHIDVQGFNVYHKNRLIKPFWRL--WNASGSDGRGVIGCL 535
            GTRIII+NL    +   E DF+ DK+DI       ++ G    ++  +M Q  P S +      SLR+Y SILYL+  P  +II+RG+ V+   +   +   ++  YRP+         L   V +T GF    K H    G  +YH+NRLIK + ++     + + G GV+G +
Sbjct:  193 GTRIIIWNL-RSYKNATEFDFEKDKYDIRIPEDLDEITGKKGYKKQERMDQIAPESDY------SLRAYCSILYLK--PRMQIILRGQKVKTQLVSKSLAYIERDVYRPK--------FLSKTVRITFGFNCRNKDH---YGIMMYHRNRLIKAYEKVGCQLRANNMGVGVVGII 347          

HSP 2 Score: 32.3426 bits (72), Expect = 8.820e-15
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  510 MAVGL*GALEANFAEPAHDKQGFERT 587
            M VG+ G +E NF +P H+KQ F+ T
Sbjct:  339 MGVGVVGIIECNFLKPTHNKQDFDYT 364          
BLAST of EY665897 vs. ExPASy Swiss-Prot
Match: MORC4_MOUSE (MORC family CW-type zinc finger protein 4 OS=Mus musculus GN=Morc4 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 8.822e-15
Identity = 53/170 (31.18%), Postives = 86/170 (50.59%), Query Frame = 2
Query:   38 GTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDEQNI-KMAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNIVNDMMLSKKVTYRPQPGASGILTDLHMAVDVTIGFVKDAKHHIDVQGFNVYHKNRLIKPFWRL---WNASGSDGRGVIGCL 535
            GTR++I+N+  +  G  ELDFD+D++DI +   + +E+ I  +    P +       +SLR++ SILY++  P  +I +R K V    I   +   +   Y+P        T  +  V +T GF    K+H +  G  +YH NRLIK F +       +  +G GVIG +
Sbjct:  215 GTRVLIWNIRRNKDGKSELDFDTDQYDILVSDFDAEEKEIGGVTSELPET------EYSLRAFCSILYMK--PRMKIFLRQKKVTTQMIAKSLANVEYDIYKP--------TSTNKQVRITFGF--SCKYH-NQFGVMMYHNNRLIKAFEKAGCQLKPTCGEGVGVIGVI 365          

HSP 2 Score: 31.187 bits (69), Expect = 8.822e-15
Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 3
Query:  516 VGL*GALEANFAEPAHDKQGFERT 587
            VG+ G +E NF +PA++KQ FE T
Sbjct:  359 VGVIGVIECNFLKPAYNKQDFEYT 382          
BLAST of EY665897 vs. ExPASy Swiss-Prot
Match: MORC4_HUMAN (MORC family CW-type zinc finger protein 4 OS=Homo sapiens GN=MORC4 PE=1 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 1.568e-13
Identity = 50/170 (29.41%), Postives = 83/170 (48.82%), Query Frame = 2
Query:   38 GTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDEQNI-KMAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNIVNDMMLSKKVTYRPQPGASGILTDLHMAVDVTIGFVKDAKHHIDVQGFNVYHKNRLIKPFWRLW---NASGSDGRGVIGCL 535
            GTR++I+N+  +  G  ELDFD+D++DI +   + +E+    +    P +       +SLR++  ILY++  P  +I +R K V    I   +   +  TY+P        T  +  V +T GF     +     G  +YH NRLIK F ++      +  +G GVIG +
Sbjct:  215 GTRVLIWNIRRNKNGKSELDFDTDQYDILVSDFDTEEKMTGGVTSELPET------EYSLRAFCGILYMK--PRMKIFLRQKKVTTQMIAKSLANVEYDTYKP--------TFTNKQVRITFGFSCKNSNQF---GIMMYHNNRLIKSFEKVGCQVKPTRGEGVGVIGVI 365          

HSP 2 Score: 31.187 bits (69), Expect = 1.568e-13
Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 3
Query:  516 VGL*GALEANFAEPAHDKQGFERT 587
            VG+ G +E NF +PA++KQ FE T
Sbjct:  359 VGVIGVIECNFLKPAYNKQDFEYT 382          
The following BLAST results are available for this feature:
BLAST of EY665897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MORC3_HUMAN8.820e-1532.57MORC family CW-type zinc finger protein 3 OS=Homo ... [more]
MORC4_MOUSE8.822e-1531.18MORC family CW-type zinc finger protein 4 OS=Mus m... [more]
MORC4_HUMAN1.568e-1329.41MORC family CW-type zinc finger protein 4 OS=Homo ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-007-A03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665897 ID=EY665897; Name=EY665897; organism=Citrus sinensis; type=EST; length=860bp
CCCGCGTCCGCATCAGTTTAATCTGATGACCTATCATGGGACACGCATAA
TTATATACAACCTTTGGGAGGATGATCAGGGACTTTTGGAACTCGATTTT
GACTCTGACAAACATGATATCCAACTCAGGGGGGTTAATCGAGATGAGCA
GAATATAAAAATGGCACAGCATTATCCCAATTCTAGACATTTCCTGACTT
ATAGACATTCATTAAGGAGTTATGCTTCGATTCTTTATCTAAGACTTCCT
CCTGGATTTCGGATCATTATCCGGGGAAAAGATGTTGAGCACCACAATAT
AGTGAATGATATGATGTTGTCTAAGAAGGTTACATATCGGCCACAGCCTG
GAGCTTCTGGGATCCTGACAGATTTACATATGGCTGTAGATGTCACTATT
GGGTTCGTGAAGGATGCAAAGCATCACATTGATGTTCAGGGTTTCAATGT
TTATCACAAGAATCGACTCATTAAGCCGTTTTGGAGGCTTTGGAATGCTT
CGGGAAGTGATGGCCGTGGGGTTATAGGGTGCCTTGGAAGCTAATTTTGC
TGAACCAGCCCATGATAAGCAGGGGTTTGAACGAACTACTGGTCTTTGCA
GACTTGAGGCACGTTTAATAAAAATGGAAAAAGGACTACGGCGAACATAA
CTGGCATGAAAATTGGATATTGCCTCCCAAAACGTTATAATAAATATATC
AAAAAATTCTTACGACAAAGAAACTCTCTTCTAACAAAAAGTTACCCCTC
CCAGGGCCCCAAAACACGAATTCTTCCCATTTTCGACCAACATTCGCTGG
GCCCCCCAAAACCACAAAATGGGCACGGGCAACGAATTCCATCCAATCCC
CTGCCACCAT
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