CK937757

Overview
NameCK937757
Unique NameCK937757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13608 contig Csv1_Contig13608:46..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937757 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 7.693e-85
Identity = 151/232 (65.09%), Postives = 168/232 (72.41%), Query Frame = 3
Query:   60 MGSLDTERATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKTMGHHVTVISSSDKKRVEAMEHLGADQYLVS 755
            MGSL+ ER T+GWAA+DPSG+LSPY YTLRNTG +DVY++V+ CGICHTD+HQIKNDLGMSNYPM                 + F              C NCRPC +D+EQYCNKKIWSYNDVY DGKPTQGGFA +MVVDQKFVVKIPDGMA EQAAPLLCAGVTV+SPL+HFGLKQS                   AK MGHHVTVISSSDKKR EA++HLGAD YLVS
Sbjct:    1 MGSLEVERKTVGWAARDPSGVLSPYEYTLRNTGPQDVYVEVMCCGICHTDVHQIKNDLGMSNYPMVPGHEVVGEVVEVGSEVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVS 232          
BLAST of CK937757 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.714e-84
Identity = 153/233 (65.67%), Postives = 169/233 (72.53%), Query Frame = 3
Query:   60 MGSLDTERATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ-SXXXXXXXXXXXXXXXXXXXAKTMGHHVTVISSSDKKRVEAMEHLGADQYLVS 755
            MGSL+ ER T GWAA+DPSG+LSPYTYTLR TG EDV+IK++YCGICHTDIHQIKNDLG SNYPM                 + F             CC+ CRPC+ADVEQYCNKKIWSYNDVYTDGKPTQGGF+  MVVDQKFVVKIPDGMA EQAAPLLCAGVTV+SPL+HFGLK+ S                   AK MGHHVTVISSSDKK+ EA++HLGAD YLVS
Sbjct:    1 MGSLEAERKTTGWAARDPSGVLSPYTYTLRETGPEDVFIKIIYCGICHTDIHQIKNDLGASNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKEISGLRGGILGLGGVGHMGVKLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVS 233          
BLAST of CK937757 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 8.506e-84
Identity = 148/232 (63.79%), Postives = 168/232 (72.41%), Query Frame = 3
Query:   60 MGSLDTERATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKTMGHHVTVISSSDKKRVEAMEHLGADQYLVS 755
            MG L+ E+ T+GWAA+DPSG+LSPYTYTLRNTG EDV +KVLYCG+CHTD+HQ+KNDLGMSNYP+                 S F              CRNC PC+ D+EQYCNKKIW+ NDVYTDGKPTQGGFA+SMVVDQKFVVKIP+GMA EQAAPLLCAG+TV+SPL+HFG KQS                   AK MGHHVTVISSS+KKR EA+EHLGAD YLVS
Sbjct:    1 MGGLEVEKTTIGWAARDPSGVLSPYTYTLRNTGPEDVEVKVLYCGLCHTDLHQVKNDLGMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVS 232          
BLAST of CK937757 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 303.138 bits (775), Expect = 1.040e-81
Identity = 147/232 (63.36%), Postives = 168/232 (72.41%), Query Frame = 3
Query:   60 MGSLDTERATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKTMGHHVTVISSSDKKRVEAMEHLGADQYLVS 755
            MGSL+TER  +GWAA D +G L+PYTY+LR+TG EDV+IKV+ CG+CHTDIHQIKNDLGMS+YPM                 + F              C+NC PC++++EQYCNKKIWSYNDVYTDGKPTQGGFAESMVV QKFVV+IPDGM+ EQAAPLLCAG+TV+SPL HFGLKQS                   AK MGHHVTVISSSDKKR EAMEHLGAD+YLVS
Sbjct:    1 MGSLETERKIVGWAATDSTGHLAPYTYSLRDTGPEDVFIKVISCGVCHTDIHQIKNDLGMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEAMEHLGADEYLVS 232          
BLAST of CK937757 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.358e-81
Identity = 144/232 (62.07%), Postives = 165/232 (71.12%), Query Frame = 3
Query:   60 MGSLDTERATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKTMGHHVTVISSSDKKRVEAMEHLGADQYLVS 755
            MGSLD E++ +GWAA+DPSG+LSPYTYTLRNTG EDV +KVLYCG+CH+D+HQ+KNDLGMSNYP+                 S F              CRNC PC+ ++EQYCNKKIW+ NDVYTDGKPTQGGFA SMVVDQ FVVKIP+GMA EQAAPLLCAG+TV+SP +HFG  QS                   AK MGHHVTVISSS+KKR EA+EHLGAD YLVS
Sbjct:    1 MGSLDVEKSAIGWAARDPSGLLSPYTYTLRNTGPEDVQVKVLYCGLCHSDLHQVKNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVS 232          
BLAST of CK937757 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.774e-81
Identity = 145/233 (62.23%), Postives = 171/233 (73.39%), Query Frame = 3
Query:   60 MGSLDT-ERATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKTMGHHVTVISSSDKKRVEAMEHLGADQYLVS 755
            MGS++  E+  +GWAA+DPSG+LSPY+YTLR+TGA+DVYIKV+ CGICHTDIHQIKNDLGMSNYPM                 S F             CC +C+PC +++EQYCNK+IWSYNDVYTDGKPTQGGFA++M+V+QKFVVKIP+GMA+EQAAPLLCAGVTV+SPLSHFGL  S                   AK MGHHVTVISSSDKK+ EA+EHLGAD Y+VS
Sbjct:    1 MGSVEAGEKKALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVS 233          
BLAST of CK937757 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.150e-80
Identity = 145/232 (62.50%), Postives = 164/232 (70.69%), Query Frame = 3
Query:   60 MGSLDTERATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKTMGHHVTVISSSDKKRVEAMEHLGADQYLVS 755
            MGSL+ ER T GWAA+DPSG+LSPYTY+LRNTG ED+YIKVL CGICH+DIHQIKNDLGMS+YPM                 + +             CCR+C PC +D EQYCNKKIW+YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+SPL  FGLKQS                   AK MGHHVTVISSSDKKR EA+EHLGAD YLVS
Sbjct:    1 MGSLEKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVS 232          
BLAST of CK937757 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.501e-80
Identity = 144/232 (62.07%), Postives = 164/232 (70.69%), Query Frame = 3
Query:   60 MGSLDTERATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKTMGHHVTVISSSDKKRVEAMEHLGADQYLVS 755
            MGSL+ ER T GWAA+DPSG+LSPYTY+LRNTG ED+YIKVL CG+CH+DIHQIKNDLGMS+YPM                 + +             CCR+C PC +D EQYCNKKIW+YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+SPL  FGLKQS                   AK MGHHVTVISSSDKKR EA+EHLGAD YLVS
Sbjct:    1 MGSLEKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGVCHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVS 232          
BLAST of CK937757 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 4.368e-80
Identity = 144/232 (62.07%), Postives = 163/232 (70.26%), Query Frame = 3
Query:   60 MGSLDTERATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKTMGHHVTVISSSDKKRVEAMEHLGADQYLVS 755
            MGSL+ ER T GWAA+DPSG+LSPYTY+LRNTG ED+YIKVL CGICH+DIHQIKNDLGMS+YPM                 + +             CCR+C PC +D EQYCNKKIW+YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+ PL  FGLKQS                   AK MGHHVTVISSSDKKR EA+EHLGAD YLVS
Sbjct:    1 MGSLEKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYRPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVS 232          
BLAST of CK937757 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.835e-78
Identity = 143/233 (61.37%), Postives = 166/233 (71.24%), Query Frame = 3
Query:   60 MGSLDT-ERATMGWAAKDPSGILSPYTYTLRNTGAEDVYIKVLYCGICHTDIHQIKNDLGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKTMGHHVTVISSSDKKRVEAMEHLGADQYLVS 755
            MGS++  ER T+G AAKDPSGIL+PYTYTLRNTG +DVYIK+ YCG+CH+D+HQIKNDLGMSNYPM                 + F             CC++CR C++++EQYCNKKIWSYNDVYTDGK TQGGFAES VV+QKFVVKIP+G+A EQ APLLCAGVTV+SPLSHFGLK                     AK +GHHVTVISSSDKK+ EA+E LGAD YLVS
Sbjct:    1 MGSIEAAERTTVGLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVS 233          
The following BLAST results are available for this feature:
BLAST of CK937757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
CADH1_OCIBA7.693e-8565.09Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH1_ARACO1.714e-8465.67Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH1_TOBAC8.506e-8463.79Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH_POPDE1.040e-8163.36Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH2_TOBAC1.358e-8162.07Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH4_ARATH1.774e-8162.23Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH_EUCGL1.150e-8062.50Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU1.501e-8062.07Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH1_EUCGU4.368e-8062.07Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH_MEDSA1.835e-7861.37Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004482_D09 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IVF_D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937757 ID=CK937757; Name=CK937757; organism=Citrus sinensis; type=EST; length=755bp
GCCGGGGACAAAACAAAAATTCACATNNNTCAGACGCTAAAACGAAAAAG
TCACAAAAAATGGGAAGCCTTGATACCGAGAGAGCAACGATGGGGTGGGC
TGCAAAGGATCCATCTGGGATTCTGTCACCTTACACTTACACTCTCAGAA
ACACAGGAGCAGAAGATGTTTACATTAAGGTTCTTTACTGTGGAATCTGC
CACACTGATATTCATCAAATAAAAAATGATCTGGGCATGTCTAACTATCC
GATGGTTCCAGGACATGAGGTGGTGGGTGAAGTGAAGGAAGTGGGTTCAG
AAGTGAGCAACTTTAAAGTAGGAGATAAGGTTGGTGTTGGGGTTCTCGTT
GGTTGCTGCAGAAACTGCAGGCCGTGCGAGGCAGATGTTGAGCAGTACTG
CAATAAGAAAATCTGGTCCTATAACGATGTTTACACCGATGGCAAGCCTA
CACAAGGCGGCTTTGCTGAGTCCATGGTCGTTGATCAAAAGTTTGTGGTG
AAAATACCAGATGGGATGGCACTGGAGCAGGCGGCACCGCTATTGTGTGC
TGGTGTGACAGTGTTCAGTCCCCTGAGCCACTTTGGATTGAAGCAGAGCG
GGCTGAGAGGAGGAATCTTGGGGCTCGGAGGAGTAGGTCACATGGGGGTT
TTGATAGCTAAGACGATGGGACACCATGTTACTGTGATTAGCTCTTCTGA
TAAGAAAAGAGTGGAAGCTATGGAGCATCTTGGTGCCGATCAGTACCTTG
TCAGC
back to top