CK937719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937719 vs. ExPASy Swiss-Prot
Match: MGRN1_RAT (Probable E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus GN=Mgrn1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.294e-25 Identity = 55/114 (48.25%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 18 TGNSQXXMAVFEKKEEGGFRVQVIKQILWVNRVRYELQEIYGIGS-----TVAGDE--TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEIK 338 TG++ +A FEK +G F V+ +KQ V+RV Y LQEIYGI + T D+ +D+ ECV+CLS+ RDT +LPCRH+C+C+ CA L++Q N CPICR P LL+I+ Sbjct: 215 TGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIR 328
BLAST of CK937719 vs. ExPASy Swiss-Prot
Match: MGRN1_MOUSE (Probable E3 ubiquitin-protein ligase MGRN1 OS=Mus musculus GN=Mgrn1 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 5.294e-25 Identity = 55/114 (48.25%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 18 TGNSQXXMAVFEKKEEGGFRVQVIKQILWVNRVRYELQEIYGIGS-----TVAGDE--TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEIK 338 TG++ +A FEK +G F V+ +KQ V+RV Y LQEIYGI + T D+ +D+ ECV+CLS+ RDT +LPCRH+C+C+ CA L++Q N CPICR P LL+I+ Sbjct: 214 TGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIR 327
BLAST of CK937719 vs. ExPASy Swiss-Prot
Match: MGRN1_HUMAN (Probable E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 5.294e-25 Identity = 55/114 (48.25%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 18 TGNSQXXMAVFEKKEEGGFRVQVIKQILWVNRVRYELQEIYGIGS-----TVAGDE--TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEIK 338 TG++ +A FEK +G F V+ +KQ V+RV Y LQEIYGI + T D+ +D+ ECV+CLS+ RDT +LPCRH+C+C+ CA L++Q N CPICR P LL+I+ Sbjct: 214 TGHAHVLLAAFEKHMDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIR 327
BLAST of CK937719 vs. ExPASy Swiss-Prot
Match: MGRN1_DANRE (Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio GN=mgrn1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.030e-25 Identity = 52/114 (45.61%), Postives = 75/114 (65.79%), Query Frame = 3 Query: 18 TGNSQXXMAVFEKKEEGGFRVQVIKQILWVNRVRYELQEIYGIGS-------TVAGDETDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEIK 338 TG++ +A FE+ +G F V+ +KQ V+RV Y LQEIYGI + + + +D+ ECV+CLS+ RDT +LPCRH+C+C+ CA L++Q N CPICR P LL+I+ Sbjct: 212 TGHAHVLLAAFERHVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENRNNQETKSTEDENSDNSSECVVCLSDLRDTLILPCRHLCLCNACADTLRYQANNCPICRLPFRALLQIR 325
BLAST of CK937719 vs. ExPASy Swiss-Prot
Match: RN157_XENLA (RING finger protein 157 OS=Xenopus laevis GN=rnf157 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.540e-24 Identity = 57/114 (50.00%), Postives = 75/114 (65.79%), Query Frame = 3 Query: 21 GNSQXXMAVFEKKEEGGFRVQVIKQILWVNRVRYELQEIYGI-------GSTVAGDE-TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEIK 338 G+S MA FEK +G F V+ +KQ V+ V Y LQEIYGI S VA DE +D+ ECV+CLS+ RDT +LPCRH+C+C+ CA L++Q + CPICR P LL+I+ Sbjct: 213 GHSHVLMATFEKHADGSFCVKPLKQKQVVDGVSYLLQEIYGIENKYNSQDSKVAEDELSDNSAECVVCLSDVRDTLILPCRHLCLCNACADTLRYQASNCPICRLPFRALLQIR 326
BLAST of CK937719 vs. ExPASy Swiss-Prot
Match: RN157_HUMAN (RING finger protein 157 OS=Homo sapiens GN=RNF157 PE=2 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 1.703e-23 Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = 3 Query: 21 GNSQXXMAVFEKKEEGGFRVQVIKQILWVNRVRYELQEIYGI-------GSTVAGDE-TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEIK 338 G+ + FEK +G F V+ +KQ V+ V Y LQEIYGI S VA DE +D+ ECV+CLS+ RDT +LPCRH+C+C+ CA L++Q N CPICR P LL+I+ Sbjct: 213 GHCHVLLGTFEKHTDGTFCVKPLKQKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQANNCPICRLPFRALLQIR 326
BLAST of CK937719 vs. ExPASy Swiss-Prot
Match: RN157_MOUSE (RING finger protein 157 OS=Mus musculus GN=Rnf157 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 3.794e-23 Identity = 54/114 (47.37%), Postives = 73/114 (64.04%), Query Frame = 3 Query: 21 GNSQXXMAVFEKKEEGGFRVQVIKQILWVNRVRYELQEIYGI-------GSTVAGDE-TDSGKECVICLSEPRDTTVLPCRHMCMCSECAKVLQFQTNRCPICRQPVERLLEIK 338 G+ + FEK +G F V+ +KQ V+ V Y LQEIYGI S VA D+ +D+ ECV+CLS+ RDT +LPCRH+C+C+ CA L++Q N CPICR P LL+I+ Sbjct: 213 GHCHVLLGTFEKHPDGTFCVKPLKQKQVVDGVSYLLQEIYGIENKYNTQDSKVAEDDVSDNSAECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQANNCPICRLPFRALLQIR 326 The following BLAST results are available for this feature:
BLAST of CK937719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937719 ID=CK937719; Name=CK937719; organism=Citrus sinensis; type=EST; length=655bpback to top |