FC921780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.909e-36 Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPGSIFVTATNFCP 187 M GACGYGNLY +GYGTNTAALSTALFNNG+SCGACFEI+C ND +WC PGSI VTATNFCP Sbjct: 44 MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCP 105 HSP 2 Score: 51.9878 bits (123), Expect = 1.909e-36 Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 GGWCNPPQQHFDLSQPVF++IA Sbjct: 115 GGWCNPPQQHFDLSQPVFQRIA 136
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 4.913e-34 Identity = 53/70 (75.71%), Postives = 59/70 (84.29%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPG--SIFVTATNFCPSK*CSP 205 M GACGYGNLY +GYGTNTAALST+LFN+G SCGACFEI+CVNDP+WC PG S+FVTATNFCP P Sbjct: 51 MGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQP 120 HSP 2 Score: 43.5134 bits (101), Expect = 4.913e-34 Identity = 16/22 (72.73%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 GGWCNPP+ HFDL+ PVF +IA Sbjct: 124 GGWCNPPRSHFDLAMPVFLKIA 145
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 4.916e-34 Identity = 50/62 (80.65%), Postives = 56/62 (90.32%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPGSIFVTATNFCP 187 M GACGYGNLY +GYGT+TAALSTALFNNG+SCG+CFEI+C ND +WC PGSI VTATNFCP Sbjct: 43 MGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCP 104 HSP 2 Score: 46.9802 bits (110), Expect = 4.916e-34 Identity = 17/22 (77.27%), Postives = 21/22 (95.45%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 GGWCNPP +HFDL+QPVF++IA Sbjct: 114 GGWCNPPLEHFDLAQPVFQRIA 135
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 6.402e-34 Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPGSIFVTATNFCP 187 M GACGYGNLY +GYGTNTAALSTALFNNG+SCGACFEI+C +D WC PG+I VTATNFCP Sbjct: 47 MGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCP 108 HSP 2 Score: 47.3654 bits (111), Expect = 6.402e-34 Identity = 18/22 (81.82%), Postives = 20/22 (90.91%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 GGWCNPP HFDLSQPVF++IA Sbjct: 118 GGWCNPPLHHFDLSQPVFQRIA 139
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.399e-33 Identity = 52/70 (74.29%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPG--SIFVTATNFCPSK*CSP 205 M GACGYGNLY +GYGTNTAALSTALFNNGMSCGACFE++C NDP+WC G SI +TATNFCP P Sbjct: 48 MGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQP 117 HSP 2 Score: 44.2838 bits (103), Expect = 2.399e-33 Identity = 16/22 (72.73%), Postives = 20/22 (90.91%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 GGWCNPP++HFDL+ PVF +IA Sbjct: 121 GGWCNPPREHFDLAMPVFLKIA 142
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.990e-33 Identity = 48/62 (77.42%), Postives = 54/62 (87.10%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPGSIFVTATNFCP 187 M GACGYGNLY +GYGTNTAALSTALFN G SCGACF+I+CV+DP+WC G+I VT TNFCP Sbjct: 46 MGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCP 107 HSP 2 Score: 46.595 bits (109), Expect = 8.990e-33 Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 GGWCNPPQ HFDL+QP+F +IA Sbjct: 117 GGWCNPPQHHFDLAQPIFLRIA 138
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.524e-32 Identity = 53/70 (75.71%), Postives = 56/70 (80.00%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPG--SIFVTATNFCPSK*CSP 205 M GACGYGNLY +GYG NTAALSTALFNNG SCGACFEI+C +DPRWC PG SI VTATNFCP P Sbjct: 53 MGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQP 122 HSP 2 Score: 41.5874 bits (96), Expect = 1.524e-32 Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQI 278 GGWCNPP++HFDL+ P+F +I Sbjct: 126 GGWCNPPREHFDLAMPMFLKI 146
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.367e-32 Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPG--SIFVTATNFCP 187 M GACGYGNLY +GYG NTAALSTALFNNG+SCG+CFE++C+NDP WC PG SI +TATNFCP Sbjct: 49 MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCP 112 HSP 2 Score: 42.743 bits (99), Expect = 3.367e-32 Identity = 15/22 (68.18%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 GGWCNPP++HFDL+ P+F IA Sbjct: 122 GGWCNPPREHFDLAMPMFLSIA 143
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 9.685e-32 Identity = 50/70 (71.43%), Postives = 56/70 (80.00%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPG--SIFVTATNFCPSK*CSP 205 M GACGYGNLY +GYG NTAALSTALFNNG SCGACFE++C +DP+WC G SIF+TATNFCP P Sbjct: 48 MGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQP 117 HSP 2 Score: 41.9726 bits (97), Expect = 9.685e-32 Identity = 15/22 (68.18%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 GGWCNPP+ HFDL+ P+F +IA Sbjct: 121 GGWCNPPRPHFDLAMPMFLKIA 142
BLAST of FC921780 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 9.688e-32 Identity = 47/62 (75.81%), Postives = 55/62 (88.71%), Query Frame = 2 Query: 2 MDGACGYGNLYREGYGTNTAALSTALFNNGMSCGACFEIQCVNDPRWCPPGSIFVTATNFCP 187 M GACGYGNLY +GYGTNTAALSTALFNNG++CGAC+E++C +DPRWC +I VTATNFCP Sbjct: 47 MGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCP 108 HSP 2 Score: 45.0542 bits (105), Expect = 9.688e-32 Identity = 17/22 (77.27%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 216 GGWCNPPQQHFDLSQPVFEQIA 281 GGWCNPP QHFDL++P F QIA Sbjct: 118 GGWCNPPLQHFDLAEPAFLQIA 139 The following BLAST results are available for this feature:
BLAST of FC921780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921780 ID=FC921780; Name=FC921780; organism=Citrus sinensis; type=EST; length=283bpback to top |