CK937680
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937680 vs. ExPASy Swiss-Prot
Match: CCSA_CITSI (Cytochrome c biogenesis protein ccsA OS=Citrus sinensis GN=ccsA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 9.389e-38 Identity = 80/91 (87.91%), Postives = 80/91 (87.91%), Query Frame = -2 Query: 5 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYEXXXXXXXXXXXIHKIFDF 277 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYE IHKIFDF Sbjct: 1 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYESLIFLSWSLSIIHKIFDF 91
BLAST of CK937680 vs. ExPASy Swiss-Prot
Match: CCSA_EUCGG (Cytochrome c biogenesis protein ccsA OS=Eucalyptus globulus subsp. globulus GN=ccsA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.709e-27 Identity = 57/73 (78.08%), Postives = 65/73 (89.04%), Query Frame = -2 Query: 59 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYE 277 MIFSTLE ILTHISFS++SI ITI+LI+ VDEI GLY SSE+GMTAT FC+TGLL+TRW+YS HFPLSDLYE Sbjct: 1 MIFSTLEHILTHISFSIISIVITIFLISLSVDEIVGLYDSSEKGMTATFFCITGLLVTRWIYSGHFPLSDLYE 73
BLAST of CK937680 vs. ExPASy Swiss-Prot
Match: CCSA_PANGI (Cytochrome c biogenesis protein ccsA OS=Panax ginseng GN=ccsA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.312e-26 Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = -2 Query: 59 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYE 277 MIFSTLE ILTHISFS+VSI ITI+LIT LVDEI LY SSE+GM A C+TGLL+TRW+YSRHFPLSDLYE Sbjct: 1 MIFSTLEHILTHISFSIVSIVITIHLITLLVDEIIKLYDSSEKGMIAIFLCITGLLVTRWIYSRHFPLSDLYE 73
BLAST of CK937680 vs. ExPASy Swiss-Prot
Match: CCSA_VITVI (Cytochrome c biogenesis protein ccsA OS=Vitis vinifera GN=ccsA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.244e-26 Identity = 58/73 (79.45%), Postives = 63/73 (86.30%), Query Frame = -2 Query: 59 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYE 277 MIFSTLE ILTHISFSVVSI ITI+LIT LVDEI GL SSE+GM AT FC+TGLL+TRW+Y HFPLSDLYE Sbjct: 1 MIFSTLEHILTHISFSVVSIVITIHLITLLVDEIVGLSDSSEKGMIATFFCITGLLVTRWIYLGHFPLSDLYE 73
BLAST of CK937680 vs. ExPASy Swiss-Prot
Match: CCSA_SOLLC (Cytochrome c biogenesis protein ccsA OS=Solanum lycopersicum GN=ccsA PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.399e-25 Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = -2 Query: 59 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYE 277 MIFSTLE ILTHISFS+VSI ITI+LITFLVDEI LY SSE+G+ T FC+TGLL+TRWV S HFPLSDLYE Sbjct: 1 MIFSTLEHILTHISFSIVSIVITIHLITFLVDEIVKLYDSSEKGIIVTFFCITGLLVTRWVSSGHFPLSDLYE 73
BLAST of CK937680 vs. ExPASy Swiss-Prot
Match: CCSA_TOBAC (Cytochrome c biogenesis protein ccsA OS=Nicotiana tabacum GN=ccsA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.133e-25 Identity = 56/73 (76.71%), Postives = 63/73 (86.30%), Query Frame = -2 Query: 59 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYE 277 MIFSTLE ILTHISFS+VSI ITI+LITFLVDEI LY SSE+G+ T FC+TGLL+TRW+ S HFPLSDLYE Sbjct: 1 MIFSTLEHILTHISFSIVSIVITIHLITFLVDEIVKLYDSSEKGIIVTFFCITGLLVTRWISSGHFPLSDLYE 73
BLAST of CK937680 vs. ExPASy Swiss-Prot
Match: CCSA_SOLTU (Cytochrome c biogenesis protein ccsA OS=Solanum tuberosum GN=ccsA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.133e-25 Identity = 56/73 (76.71%), Postives = 63/73 (86.30%), Query Frame = -2 Query: 59 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYE 277 MIFSTLE ILTHISFS+VSI ITI+LITFLVDEI LY SSE+G+ T FC+TGLL+TRW+ S HFPLSDLYE Sbjct: 1 MIFSTLEHILTHISFSIVSIVITIHLITFLVDEIVKLYDSSEKGIIVTFFCITGLLVTRWISSGHFPLSDLYE 73
BLAST of CK937680 vs. ExPASy Swiss-Prot
Match: CCSA_SOLBU (Cytochrome c biogenesis protein ccsA OS=Solanum bulbocastanum GN=ccsA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.133e-25 Identity = 56/73 (76.71%), Postives = 63/73 (86.30%), Query Frame = -2 Query: 59 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYE 277 MIFSTLE ILTHISFS+VSI ITI+LITFLVDEI LY SSE+G+ T FC+TGLL+TRW+ S HFPLSDLYE Sbjct: 1 MIFSTLEHILTHISFSIVSIVITIHLITFLVDEIVKLYDSSEKGIIVTFFCITGLLVTRWISSGHFPLSDLYE 73
BLAST of CK937680 vs. ExPASy Swiss-Prot
Match: CCSA_NICSY (Cytochrome c biogenesis protein ccsA OS=Nicotiana sylvestris GN=ccsA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.133e-25 Identity = 56/73 (76.71%), Postives = 63/73 (86.30%), Query Frame = -2 Query: 59 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYE 277 MIFSTLE ILTHISFS+VSI ITI+LITFLVDEI LY SSE+G+ T FC+TGLL+TRW+ S HFPLSDLYE Sbjct: 1 MIFSTLEHILTHISFSIVSIVITIHLITFLVDEIVKLYDSSEKGIIVTFFCITGLLVTRWISSGHFPLSDLYE 73
BLAST of CK937680 vs. ExPASy Swiss-Prot
Match: CCSA_ATRBE (Cytochrome c biogenesis protein ccsA OS=Atropa belladonna GN=ccsA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.133e-25 Identity = 56/73 (76.71%), Postives = 63/73 (86.30%), Query Frame = -2 Query: 59 MIFSTLERILTHISFSVVSIGITIYLITFLVDEIRGLYASSERGMTATAFCLTGLLITRWVYSRHFPLSDLYE 277 MIFSTLE ILTHISFS+VSI ITI+LITFLVDEI LY SSE+G+ T FC+TGLL+TRW+ S HFPLSDLYE Sbjct: 1 MIFSTLEHILTHISFSIVSIVITIHLITFLVDEIVKLYDSSEKGIIVTFFCITGLLVTRWISSGHFPLSDLYE 73 The following BLAST results are available for this feature:
BLAST of CK937680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937680 ID=CK937680; Name=CK937680; organism=Citrus sinensis; type=EST; length=305bpback to top |