CK937647
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK937647 vs. ExPASy Swiss-Prot
Match: RL44_GOSHI (60S ribosomal protein L44 OS=Gossypium hirsutum GN=RPL44 PE=3 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 6.715e-28 Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 1 Query: 1 AGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 168 +GYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS Sbjct: 48 SGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 103
BLAST of CK937647 vs. ExPASy Swiss-Prot
Match: RL36A_ARATH (60S ribosomal protein L36a OS=Arabidopsis thaliana GN=RPL36AA PE=2 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 1.072e-25 Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = 1 Query: 1 AGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 168 +GYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIKRCKHFEIGGDKKGKGTS Sbjct: 48 SGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTS 103
BLAST of CK937647 vs. ExPASy Swiss-Prot
Match: RL44_PHARH (60S ribosomal protein L44 OS=Phaffia rhodozyma GN=RPL44 PE=3 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 1.958e-19 Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 1 Query: 1 AGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 168 +GYGGQTKPVFHKKAKTTKK+VLRL+C CK+ Q +KRCKHFE+GGDKK KG + Sbjct: 48 SGYGGQTKPVFHKKAKTTKKVVLRLECSVCKYKMQMTLKRCKHFELGGDKKTKGAA 103
BLAST of CK937647 vs. ExPASy Swiss-Prot
Match: RL44_CHLRE (60S ribosomal protein L44 OS=Chlamydomonas reinhardtii GN=RPL44 PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 7.441e-19 Identity = 41/51 (80.39%), Postives = 44/51 (86.27%), Query Frame = 1 Query: 1 AGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKK 153 +GYGGQTKPVFHKKAKTTKKIVLR+QCQ CK +KRCKHFEIGGDKK Sbjct: 46 SGYGGQTKPVFHKKAKTTKKIVLRMQCQECKQTCMKGLKRCKHFEIGGDKK 96
BLAST of CK937647 vs. ExPASy Swiss-Prot
Match: RL44_CANGY (60S ribosomal protein L44 OS=Candida glycerinogenes GN=RPL44 PE=3 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 7.441e-19 Identity = 41/56 (73.21%), Postives = 47/56 (83.93%), Query Frame = 1 Query: 1 AGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 168 +GYGGQTKPVFHKKAKTTKK+VLRL+C CK Q +KRCKHFE+GGDKK KG + Sbjct: 48 SGYGGQTKPVFHKKAKTTKKVVLRLECVACKTKLQLSLKRCKHFELGGDKKQKGAA 103
BLAST of CK937647 vs. ExPASy Swiss-Prot
Match: RL44_PICJA (60S ribosomal protein L44 OS=Pichia jadinii GN=RPL44 PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 9.719e-19 Identity = 41/54 (75.93%), Postives = 47/54 (87.04%), Query Frame = 1 Query: 1 AGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 162 +GYGGQTKPVFHKKAKTTKK+VLRL+C CK +Q +KRCKHFE+GGDKK KG Sbjct: 48 SGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKG 101
BLAST of CK937647 vs. ExPASy Swiss-Prot
Match: RL44_COPCI (60S ribosomal protein L44 OS=Coprinopsis cinerea GN=RPL44 PE=3 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 9.719e-19 Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 1 Query: 1 AGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 168 +GYGGQTKPVFHKKAKTTKK+VLRL+C CK+ Q +KRCKHFE+GG+KK KG + Sbjct: 48 SGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGAA 103
BLAST of CK937647 vs. ExPASy Swiss-Prot
Match: RL44_COPC7 (60S ribosomal protein L44 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPL44 PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 9.719e-19 Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 1 Query: 1 AGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 168 +GYGGQTKPVFHKKAKTTKK+VLRL+C CK+ Q +KRCKHFE+GG+KK KG + Sbjct: 48 SGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGAA 103
BLAST of CK937647 vs. ExPASy Swiss-Prot
Match: RL44_CAEEL (60S ribosomal protein L44 OS=Caenorhabditis elegans GN=rpl-41 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 9.719e-19 Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 1 Query: 1 AGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 162 +G+GGQTKP+F KKAKTTKKIVLR++C CKH Q PIKRCKHFE+GG KK +G Sbjct: 47 SGFGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRG 100
BLAST of CK937647 vs. ExPASy Swiss-Prot
Match: RL44_DEBHA (60S ribosomal protein L44 OS=Debaryomyces hansenii GN=RPL44 PE=3 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 1.269e-18 Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = 1 Query: 4 GYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 162 GYGGQTKPVFHKKAKTTKK+VLRL+C CK +Q +KRCKHFE+GGDKK KG Sbjct: 49 GYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDKKQKG 101 The following BLAST results are available for this feature:
BLAST of CK937647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937647 ID=CK937647; Name=CK937647; organism=Citrus sinensis; type=EST; length=338bpback to top |