CK937565

Overview
NameCK937565
Unique NameCK937565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK937565_ssr60 microsatellite CK937565_ssr60:60..69. BLAST: Citrus ESTs to Prunus persica proteins V1
CK937565_ssr269 microsatellite CK937565_ssr269:269..283. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK937565 vs. ExPASy Swiss-Prot
Match: MPK6_ARATH (Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 9.664e-92
Identity = 130/152 (85.53%), Postives = 144/152 (94.74%), Query Frame = 1
Query:  361 SVLNTETNELVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIAVRDVVPPPLRREFTDVYIAAELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYR 816
            S +N+ETNE VAIKKIANAFDN +DAKRTLREIKLLRH+DHEN++A+RD++PPPLR  F DVYIA ELMDTDLHQIIRSNQ+LSEEHCQYFLYQ+LRGLKYIHSANV+HRDLKPSNLLLNANCDLKICDFGLAR TSE++FMTEYVVTRWYR
Sbjct:   79 SAMNSETNESVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPLRNAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSESDFMTEYVVTRWYR 230          

HSP 2 Score: 78.9518 bits (193), Expect = 9.664e-92
Identity = 33/43 (76.74%), Postives = 40/43 (93.02%), Query Frame = 2
Query:  116 DFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIV 244
            + PA  +HGG+FIQYNIFGN+FE+TAKY+PPIMPIG+GAYGIV
Sbjct:   35 NIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIV 77          
BLAST of CK937565 vs. ExPASy Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 6.213e-91
Identity = 130/152 (85.53%), Postives = 141/152 (92.76%), Query Frame = 1
Query:  361 SVLNTETNELVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIAVRDVVPPPLRREFTDVYIAAELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYR 816
            S LN+ETNE VAIKKIANAFDN +DAKRTLREIKLLRH+DHEN++A+RD++PPP R  F DVYIA ELMDTDLHQIIRSNQ LSEEHCQYFLYQ+LRGLKYIHSANV+HRDLKPSNLLLNANCDLKICDFGLAR TSE +FMTEYVVTRWYR
Sbjct:   76 SALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQREAFNDVYIAYELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYR 227          

HSP 2 Score: 78.9518 bits (193), Expect = 6.213e-91
Identity = 33/43 (76.74%), Postives = 40/43 (93.02%), Query Frame = 2
Query:  116 DFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIV 244
            + PA  +HGG+FIQYNIFGN+FE+TAKY+PPIMPIG+GAYGIV
Sbjct:   32 NIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIV 74          
BLAST of CK937565 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 6.214e-91
Identity = 130/152 (85.53%), Postives = 141/152 (92.76%), Query Frame = 1
Query:  361 SVLNTETNELVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIAVRDVVPPPLRREFTDVYIAAELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYR 816
            S  N+ETNE VA+KKIANAFDN +DAKRTLREIKLLRH+DHENV+A+RD+VPPP R  F DVYIA ELMDTDLHQIIRSNQ+LSEEHCQYFLYQ+LRGLKYIHSANV+HRDLKPSNLLLNANCDLKICDFGLAR TSE +FMTEYVVTRWYR
Sbjct:   71 SAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYR 222          

HSP 2 Score: 81.2629 bits (199), Expect = 6.214e-91
Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 2
Query:   74 MADVAQVNGVGQTADFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIV 244
            M+D A         + PAV +HGG+FIQYNIFGN+FE+TAKY+PPIMPIG+GAYGIV
Sbjct:   13 MSDAAPAPPQMGIENIPAVLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIV 69          
BLAST of CK937565 vs. ExPASy Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 1.799e-90
Identity = 129/152 (84.87%), Postives = 141/152 (92.76%), Query Frame = 1
Query:  361 SVLNTETNELVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIAVRDVVPPPLRREFTDVYIAAELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYR 816
            S LN+ET E VAIKKIANAFDN +DAKRTLREIKLLRH+DHEN++A+RD++PPP R  F DVYIA ELMDTDLHQIIRSNQ+LSEEHCQYFLYQ+LRGLKYIHSANV+HRDLKPSNLLLNANCDLKICDFGLAR TSE +FMTEYVVTRWYR
Sbjct:   83 SALNSETGEQVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQRNSFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYR 234          

HSP 2 Score: 78.1814 bits (191), Expect = 1.799e-90
Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 2
Query:   98 GVGQTADFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIV 244
            G G   +  A  +HGG+FIQYNIFGN+FE+TAKY+PPI+PIG+GAYGIV
Sbjct:   33 GAGMMENIQATLSHGGRFIQYNIFGNVFEVTAKYKPPILPIGKGAYGIV 81          
BLAST of CK937565 vs. ExPASy Swiss-Prot
Match: MAPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 3.062e-90
Identity = 129/152 (84.87%), Postives = 141/152 (92.76%), Query Frame = 1
Query:  361 SVLNTETNELVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIAVRDVVPPPLRREFTDVYIAAELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYR 816
            S  N+ETNE VA+KKIANAFDN +DAKRTLREIKL+RH+DHENV+A+RD+VPPP R  F DVYIA ELMDTDLHQIIRSNQ+LSEEHCQYFLYQ+LRGLKYIHSANV+HRDLKPSNLLLNANCDLKICDFGLAR TSE +FMTEYVVTRWYR
Sbjct:   78 SAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLVRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYR 229          

HSP 2 Score: 80.1073 bits (196), Expect = 3.062e-90
Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 2
Query:  116 DFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIV 244
            + PA  +HGG+FIQYNIFGN+FE+TAKYRPPIMPIG+GAYGIV
Sbjct:   34 NIPATLSHGGRFIQYNIFGNIFEVTAKYRPPIMPIGKGAYGIV 76          
BLAST of CK937565 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSJ (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica GN=MPK5 PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.384e-87
Identity = 129/152 (84.87%), Postives = 141/152 (92.76%), Query Frame = 1
Query:  361 SVLNTETNELVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIAVRDVVPPPLRREFTDVYIAAELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYR 816
            SV+N ET E+VAIKKIANAF+N MDAKRTLREIKLLRHLDHEN+I +RDV+PPP+ + F DVYIA ELMDTDLH IIRSNQ LSEEHCQYFLYQ+LRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARP+SE++ MTEYVVTRWYR
Sbjct:   52 SVMNFETREMVAIKKIANAFNNDMDAKRTLREIKLLRHLDHENIIGIRDVIPPPIPQAFNDVYIATELMDTDLHHIIRSNQELSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPSSESDMMTEYVVTRWYR 203          

HSP 2 Score: 70.0922 bits (170), Expect = 1.384e-87
Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 2
Query:  113 ADFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIV 244
            A+F    THGG+++ Y+IFGN FE+T KY+PPIMPIGRGAYGIV
Sbjct:    7 AEFRPTMTHGGRYLLYDIFGNKFEVTNKYQPPIMPIGRGAYGIV 50          
BLAST of CK937565 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSI (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica GN=MPK5 PE=1 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 1.384e-87
Identity = 129/152 (84.87%), Postives = 141/152 (92.76%), Query Frame = 1
Query:  361 SVLNTETNELVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIAVRDVVPPPLRREFTDVYIAAELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYR 816
            SV+N ET E+VAIKKIANAF+N MDAKRTLREIKLLRHLDHEN+I +RDV+PPP+ + F DVYIA ELMDTDLH IIRSNQ LSEEHCQYFLYQ+LRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARP+SE++ MTEYVVTRWYR
Sbjct:   52 SVMNFETREMVAIKKIANAFNNDMDAKRTLREIKLLRHLDHENIIGIRDVIPPPIPQAFNDVYIATELMDTDLHHIIRSNQELSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPSSESDMMTEYVVTRWYR 203          

HSP 2 Score: 70.0922 bits (170), Expect = 1.384e-87
Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 2
Query:  113 ADFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIV 244
            A+F    THGG+++ Y+IFGN FE+T KY+PPIMPIGRGAYGIV
Sbjct:    7 AEFRPTMTHGGRYLLYDIFGNKFEVTNKYQPPIMPIGRGAYGIV 50          
BLAST of CK937565 vs. ExPASy Swiss-Prot
Match: MPK6_ORYSJ (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica GN=MPK6 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 2.364e-81
Identity = 117/152 (76.97%), Postives = 135/152 (88.82%), Query Frame = 1
Query:  361 SVLNTETNELVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIAVRDVVPPPLRREFTDVYIAAELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYR 816
            + +N+E  E VAIKKI NAFDNH+DAKRTLREIKLLRH+DHEN+IA++D++ PP R  F DVYI +ELMDTDLHQIIRSNQ L+++HCQYFLYQLLRGLKY+HSANV+HRDLKPSNL LNANCDLKI DFGLAR T+E + MTEYVVTRWYR
Sbjct:   59 AAVNSENGEEVAIKKIGNAFDNHIDAKRTLREIKLLRHMDHENIIAIKDIIRPPRRDNFNDVYIVSELMDTDLHQIIRSNQPLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKIADFGLARTTTETDLMTEYVVTRWYR 210          

HSP 2 Score: 68.1662 bits (165), Expect = 2.364e-81
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 2
Query:   98 GVGQTADFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIV 244
            G G  A    + THGG+++ YN++GN FE+++KY PPI PIGRGAYGIV
Sbjct:    9 GGGGGAQIKGMGTHGGRYVLYNVYGNFFEVSSKYAPPIRPIGRGAYGIV 57          
BLAST of CK937565 vs. ExPASy Swiss-Prot
Match: MPK3_ARATH (Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana GN=MPK3 PE=1 SV=2)

HSP 1 Score: 299.286 bits (765), Expect = 1.713e-80
Identity = 149/179 (83.24%), Postives = 158/179 (88.27%), Query Frame = 1
Query:  334 FGSCFEI*S------------------SVLNTETNELVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIAVRDVVPPPLRREFTDVYIAAELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYR 816
            FGS FEI S                  SVL+TETNELVA+KKIANAFDNHMDAKRTLREIKLLRHLDHEN+IA+RDVVPPPLRR+F+DVYI+ ELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSAN+IHRDLKPSNLLLNANCDLKICDFGLARPTSEN+FMTEYVVTRWYR
Sbjct:   27 FGSLFEITSKYRPPIIPIGRGAYGIVCSVLDTETNELVAMKKIANAFDNHMDAKRTLREIKLLRHLDHENIIAIRDVVPPPLRRQFSDVYISTELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANIIHRDLKPSNLLLNANCDLKICDFGLARPTSENDFMTEYVVTRWYR 205          

HSP 2 Score: 88.1965 bits (217), Expect = 5.961e-17
Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 2
Query:   98 GVGQTADFPAVPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIV 244
            G GQ  DFPAV THGGQFI Y+IFG+LFEIT+KYRPPI+PIGRGAYGIV
Sbjct:    4 GGGQYTDFPAVETHGGQFISYDIFGSLFEITSKYRPPIIPIGRGAYGIV 52          
BLAST of CK937565 vs. ExPASy Swiss-Prot
Match: MMK2_MEDSA (Mitogen-activated protein kinase homolog MMK2 OS=Medicago sativa GN=MMK2 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 9.753e-80
Identity = 114/152 (75.00%), Postives = 135/152 (88.82%), Query Frame = 1
Query:  361 SVLNTETNELVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENVIAVRDVVPPPLRREFTDVYIAAELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYR 816
            + +N ET E VAIKKI NAFDN +DAKRTLREIKLLRH+DHENV++++D++ PP +  F  VYI +ELMDTDLHQIIRSNQ ++++HC+YF+YQLLRGLKY+HSANV+HRDLKPSNLLLNANCDLKI DFGLAR TSE +FMTEYVVTRWYR
Sbjct:   53 AAVNAETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENVMSIKDIIRPPQKENFNHVYIVSELMDTDLHQIIRSNQPMTDDHCRYFVYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYR 204          

HSP 2 Score: 68.9366 bits (167), Expect = 9.753e-80
Identity = 28/39 (71.79%), Postives = 35/39 (89.74%), Query Frame = 2
Query:  128 VPTHGGQFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIV 244
            VPTHGG+++QYNI+GNLFE++ KY PPI  +GRGAYGIV
Sbjct:   13 VPTHGGRYLQYNIYGNLFEVSRKYVPPIRSVGRGAYGIV 51          
The following BLAST results are available for this feature:
BLAST of CK937565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MPK6_ARATH9.664e-9285.53Mitogen-activated protein kinase 6 OS=Arabidopsis ... [more]
NTF4_TOBAC6.213e-9185.53Mitogen-activated protein kinase homolog NTF4 OS=N... [more]
MMK1_MEDSA6.214e-9185.53Mitogen-activated protein kinase homolog MMK1 OS=M... [more]
MPK1_ORYSJ1.799e-9084.87Mitogen-activated protein kinase 1 OS=Oryza sativa... [more]
MAPK_PEA3.062e-9084.87Mitogen-activated protein kinase homolog D5 OS=Pis... [more]
MPK5_ORYSJ1.384e-8784.87Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK5_ORYSI1.384e-8784.87Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK6_ORYSJ2.364e-8176.97Mitogen-activated protein kinase 6 OS=Oryza sativa... [more]
MPK3_ARATH1.713e-8083.24Mitogen-activated protein kinase 3 OS=Arabidopsis ... [more]
MMK2_MEDSA9.753e-8075.00Mitogen-activated protein kinase homolog MMK2 OS=M... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004779_A03 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937565 ID=CK937565; Name=CK937565; organism=Citrus sinensis; type=EST; length=816bp
GGGGACTCGAGAAAAACACAAACACAAACGAGAGCGTAGAAAATTAATTA
GAGAGAAAAAGAGAGAGAGTAAAATGGCTGACGTGGCGCAGGTCAACGGC
GTAGGTCAAACGGCTGATTTTCCTGCGGTACCGACGCACGGCGGTCAGTT
TATACAGTACAATATATTTGGAAACTTGTTTGAAATCACGGCCAAGTATC
GGCCTCCGATCATGCCGATTGGTCGCGGTGCGTACGGGATCGTTTGGTAC
TTGTCCTGATCGAGCTTATTTTGTTTTGTTTTGTTGATTCGATTTCGATA
CGATTCGGTTTTGTATGTTGAAATGAAATGGATTTTGGTTCTTGTTTTGA
AATTTGAAGCTCGGTGTTGAATACGGAGACGAATGAGCTCGTTGCGATAA
AGAAAATAGCGAACGCTTTTGATAACCACATGGATGCCAAGCGAACGCTT
CGTGAGATTAAGCTTCTGCGACATTTGGATCATGAAAATGTGATAGCTGT
AAGAGATGTGGTTCCTCCACCGTTACGAAGAGAATTCACTGATGTCTATA
TTGCTGCGGAACTCATGGACACTGACCTTCACCAAATTATTCGCTCAAAT
CAAAGTTTATCCGAGGAGCACTGCCAGTATTTCTTGTATCAACTTCTTCG
AGGACTCAAGTATATCCATTCAGCAAATGTTATTCATCGGGATTTGAAGC
CCAGCAATCTCTTATTAAATGCAAATTGTGATTTAAAAATTTGTGATTTT
GGTCTTGCTCGTCCAACCTCAGAGAATGAGTTCATGACAGAGTATGTTGT
CACAAGATGGTACCGA
back to top