CX675336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675336 vs. ExPASy Swiss-Prot
Match: ROS1_ARATH (Protein ROS1 OS=Arabidopsis thaliana GN=ROS1 PE=1 SV=2) HSP 1 Score: 331.643 bits (849), Expect = 3.260e-90 Identity = 158/231 (68.40%), Postives = 180/231 (77.92%), Query Frame = 1 Query: 4 KSKSTRVSKEKQNDFDWDSLRRQVEANGGKKERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNMLAGRIKDFLNRLVSDHGSVDLEWLRDVPPDKAKEYLLSFRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVXXXXXXXXXXXXXXXXXXVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHXXXXXXXXRLALPGPEE 696 K K +V KE++ FDWD LRR+ +A G +E+ T D++DW+A+R ADV ++A TIK RGMN+ LA RI+ FL+RLV+DHGS+DLEWLRDVPPDKAKEYLLSF GLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWV +LESIQKYLWPRLCKLDQ+TLYELHYQMITFGKVFCTKSKPNCNACPM+GECRH RLALP E+ Sbjct: 843 KEKGKKVLKEEKKAFDWDCLRREAQARAGIREKTRSTMDTVDWKAIRAADVKEVAETIKSRGMNHKLAERIQGFLDRLVNDHGSIDLEWLRDVPPDKAKEYLLSFNGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYPMLESIQKYLWPRLCKLDQKTLYELHYQMITFGKVFCTKSKPNCNACPMKGECRHFASAFASARLALPSTEK 1073
BLAST of CX675336 vs. ExPASy Swiss-Prot
Match: DME_ARATH (Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME PE=1 SV=2) HSP 1 Score: 327.791 bits (839), Expect = 4.708e-89 Identity = 161/257 (62.65%), Postives = 188/257 (73.15%), Query Frame = 1 Query: 34 KQNDFDWDSLRRQVEANGGKKERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNMLAGRIKDFLNRLVSDHGSVDLEWLRDVPPDKAKEYLLSFRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVXXXXXXXXXXXXXXXXXXVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHXXXXXXXXRLALPGPEEKAIVSANENRTNTQNPAMMINQLPLPLTHATDLPVG 804 K+ WDSLR+ VE N G++ER ++ DS+D+EA+R A +++I+ IKERGMNNMLA RIKDFL R+V DHG +DLEWLR+ PPDKAK+YLLS RGLGLKSVECVRLLTLH+LAFPVDTNVGRIAVR+GWV VLESIQK+LWPRLCKLDQRTLYELHYQ+ITFGKVFCTKS+PNCNACPMRGECRH RLALP PEE+++ SA P + I + LPL L G Sbjct: 1444 KKPTSQWDSLRKDVEGNEGRQERNKNNMDSIDYEAIRRASISEISEAIKERGMNNMLAVRIKDFLERIVKDHGGIDLEWLRESPPDKAKDYLLSIRGLGLKSVECVRLLTLHNLAFPVDTNVGRIAVRMGWVPLQPLPESLQLHLLELYPVLESIQKFLWPRLCKLDQRTLYELHYQLITFGKVFCTKSRPNCNACPMRGECRHFASAYASARLALPAPEERSLTSATIPVPPESYPPVAIPMIELPLPLEKSLASG 1700
BLAST of CX675336 vs. ExPASy Swiss-Prot
Match: DML2_ARATH (DEMETER-like protein 2 OS=Arabidopsis thaliana GN=DML2 PE=2 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 3.869e-75 Identity = 147/255 (57.65%), Postives = 174/255 (68.24%), Query Frame = 1 Query: 4 KSKSTRVSKEKQNDFDWDSLRRQVEANGGKKERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNMLAGRIKDFLNRLVSDHGSVDLEWLRDVPPDKAKEYLLSFRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVXXXXXXXXXXXXXXXXXXVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHXXXXXXXXRLALPGPEEKAIVSANENRTNTQNPAMMINQLP 768 KSK + S +K++ DWDSLR++ E+ G K+ER E T D++DW+A+RC DV+KIAN I +RGMNNMLA RIK FLNRLV HGS+DLEWLRDVPPDKAKEYLLS GLGLKSVECVRLL+LH +AFPVDTNVGRIAVRLGWV L+ + L L + LYELHY MITFGKVFCTK KPNCNACPM+ ECRH RLALP PEE S + ++ +++N P Sbjct: 776 KSKESAKSTQKKS-VDWDSLRKEAESGGRKRERTERTMDTVDWDALRCTDVHKIANIIIKRGMNNMLAERIKAFLNRLVKKHGSIDLEWLRDVPPDKAKEYLLSINGLGLKSVECVRLLSLHQIAFPVDTNVGRIAVRLGWVP------------------LQPLPDELQMHLLE-----LYELHYHMITFGKVFCTKVKPNCNACPMKAECRHYSSARASARLALPEPEESDRTSVMIHERRSKRKPVVVNFRP 1006
BLAST of CX675336 vs. ExPASy Swiss-Prot
Match: DML3_ARATH (DEMETER-like protein 3 OS=Arabidopsis thaliana GN=DML3 PE=2 SV=2) HSP 1 Score: 232.261 bits (591), Expect = 2.692e-60 Identity = 119/233 (51.07%), Postives = 146/233 (62.66%), Query Frame = 1 Query: 1 SKSKSTRVSKEKQNDFDWDSLRRQVEANGGKKERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNMLAGRIKDFLNRLVSDHGSVDLEWLRDVPPDKAKEYLLSFRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVXXXXXXXXXXXXXXXXXXVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHXXXXXXXXRLALPGPEEK 699 +K K+ + + DW++LRR G RPE DS++W VR + N + TIK+RG +L+ RI FLN V+ +G++DLEWLR+ P K YLL G+GLKS ECVRLL L H AFPVDTNVGRIAVRLG V ++SIQKYLWPRLCKL Q TLYELHYQMITFGKVFCTK+ PNCNACPM+ EC++ ++ L PEEK Sbjct: 485 AKRKNEKTGIIEDEIVDWNNLRRMYTKEGS---RPEMHMDSVNWSDVRLSGQNVLETTIKKRGQFRILSERILKFLNDEVNQNGNIDLEWLRNAPSHLVKRYLLEIEGIGLKSAECVRLLGLKHHAFPVDTNVGRIAVRLGLVPLEPLPNGVQMHQLFEYPSMDSIQKYLWPRLCKLPQETLYELHYQMITFGKVFCTKTIPNCNACPMKSECKYFASAYVSSKVLLESPEEK 714 The following BLAST results are available for this feature:
BLAST of CX675336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675336 ID=CX675336; Name=CX675336; organism=Citrus sinensis; type=EST; length=843bpback to top |