CK937540

Overview
NameCK937540
Unique NameCK937540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1555 contig Csv1_Contig1555:34..573. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 5.629e-55
Identity = 108/186 (58.06%), Postives = 128/186 (68.82%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            D+F AGTDT+SSTLEWAMAELLR+P                             YLQAVVKET RLHPA PLL+PRKA +DVE+ GF+VPK  QV VN WAIGRD   WENP  F PERF+G ++D KGR++EL PFG GRRICPGLPLA++ + LML SL+ SFDWKL +    E++DM+E FGI
Sbjct:  307 DMFTAGTDTSSSTLEWAMAELLRNPKTMVKAQAEMDRVLGQNSVVQESDISGLPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSEDLDMDETFGI 492          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.649e-54
Identity = 107/186 (57.53%), Postives = 129/186 (69.35%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            DLF AGTDT SST+EWAMAELLR+P+                            YLQAVVKET RLHPA PLL+PRKA +DVE+ GF+VPK  QVFVN WAIGRD   WEN   F PERFLG ++D +GR++EL PFG+GRRICPGLPLA++ + LML SL+ SFDWKL +    E++DM+E FG+
Sbjct:  308 DLFGAGTDTNSSTVEWAMAELLRNPETMVKAQAEIDCVIGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGL 493          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.435e-50
Identity = 101/186 (54.30%), Postives = 124/186 (66.67%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLE----DENMDMEEKFGI 465
            D+F AGTDT+SSTLEWAM ELL++P                             YLQAVVKET RLH  VPLL+PRKA +D EI GF+V K  QV VN WAIGRD   W+NP  F PERFLG ++D +GR++EL PFG+GRRICPG+PLA++ + LML SL+ SFDWKL      E++DM+E FG+
Sbjct:  307 DMFTAGTDTSSSTLEWAMTELLKNPKTMAKAQAEIDCVIGQNGIVEESDISKLPYLQAVVKETFRLHTPVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGL 492          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 2.447e-50
Identity = 101/186 (54.30%), Postives = 125/186 (67.20%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            D+FVAGTDT SST+EWAM EL RS +                            YLQA+VKETLRLHPA P L+PRK+ +DV+I GF+VPK  QV VN WAIGRD   WENP+ F PERFL    D KGR+FELIPFGSGRR+CPG+ +A++ +H++L SL+ SFDWKL++     N+DM E FG+
Sbjct:  309 DVFVAGTDTNSSTMEWAMTELFRSTEKMVKAQSEIRQVIGQNGFVQESDIPSLPYLQAIVKETLRLHPAAP-LIPRKSESDVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGL 493          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.072e-49
Identity = 98/185 (52.97%), Postives = 121/185 (65.41%), Query Frame = -1
Query:    4 DLFVAGTDTTSSTLEWAMAELLRSPD---------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFG 465
            DLFVAGTDTTS T+EWAM ELLR P                             YL  +VKE LRLHP  PLLLPRK +  VE++G+ +P G  VFVNAWAIGRD   W++ L F P+RFL S LD +G +F+LIPFG+GRRICPG+PLA RM+ +MLGSL+N+FDWK++     + +DM EK G
Sbjct:  289 DLFVAGTDTTSITIEWAMTELLRKPHIMSKAKEELEKVIGKGSIVKEDDVLRLPYLSCIVKEVLRLHPPSPLLLPRKVVTQVELSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNG 473          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 2.992e-48
Identity = 94/186 (50.54%), Postives = 123/186 (66.13%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKL----EDENMDMEEKFGI 465
            ++F+AGT+TTSS++EWA+ ELLR P A                           Y+QAV+KE LRLHP +PLL+PRKA+ D +  G+ +PKG QV VNAWAIGRD   W+NP  F PERFL S +D KG+N+ELIPFG+GRR+C GLPL  RM+H   GSL++ FDW+L      ++++MEE  GI
Sbjct:  267 EMFLAGTETTSSSVEWALTELLRHPQAMAKVKLEILQVIGPNKKFEECDIDSLPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEESMGI 452          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 8.147e-46
Identity = 88/186 (47.31%), Postives = 124/186 (66.67%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            ++F+AGT+TTSS++EWA+ ELLR P+A                           Y+QAV+KE+LRLHP +P L+PR+ + D +  G+ VPK  QV VNAWAIGRD   W++P+SF PERFLGS +D KG+++ LIPFG+GRR+C GLPL  RM+H  LGSL+  F+W+L D    ++++M+   G+
Sbjct:  305 EMFLAGTETTSSSVEWALTELLRHPEAMAKVKTEISQAIEPNRKFEDSDIENLPYMQAVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELPDGVSPKSINMDGSMGV 490          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.699e-43
Identity = 86/185 (46.49%), Postives = 119/185 (64.32%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPD--------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            +LF AGT+T++ST+EWAM EL ++P                            YL+A VKETLRLHP  PLLLPR+AL    I  + +PK  Q+ VNAW IGRD  TW +PL+F PERFL S++DF+G +F LIPFG+GRRICPGLP+A + + L++ + + + DW L +    +++ +EEKFG+
Sbjct:  287 ELFGAGTETSASTIEWAMTELTKNPKITAKIRSEIQTVVGERSVKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGL 471          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.898e-43
Identity = 86/185 (46.49%), Postives = 119/185 (64.32%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPD--------------------------AYLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLED----ENMDMEEKFGI 465
            +LF AGT+T++ST+EWAM EL ++P                            YL+A VKETLRLHP  PLLLPR+AL    I  + +PK  Q+ VNAW IGRD  TW +PL+F PERFL S++DF+G +F LIPFG+GRRICPGLP+A + + L++ + + + DW L +    +++ +EEKFG+
Sbjct:  288 ELFGAGTETSASTIEWAMTELTKNPKITAKLRSELQTVVGERSVKESDFPNLPYLEATVKETLRLHPPTPLLLPRRALETCTILNYTIPKDCQIMVNAWGIGRDPKTWIDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGL 472          
BLAST of CK937540 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 7.137e-42
Identity = 87/184 (47.28%), Postives = 111/184 (60.33%), Query Frame = -1
Query:    1 DLFVAGTDTTSSTLEWAMAELLRSPDA---------------------------YLQAVVKETLRLHPAVPLLLPRKALADVEIAGFIVPKGAQVFVNAWAIGRDELTWENPLSFMPERFLGSNLDFKGRNFELIPFGSGRRICPGLPLAIRMLHLMLGSLINSFDWKLEDE--NMDMEEKFGI 465
            D+F AGTDTT+  LEWAM ELLR P+                            YL+AV+KET+R H  +PLL+PR A  DVE+ G+ VP G  V +NAWAIGRD  +W+ P  F PERFL S++DFKG +FELIPFG+GRR CPG    +  L   L +L+  FDW+L  E   +DM E+ G+
Sbjct:  304 DVFAAGTDTTAVVLEWAMTELLRHPEIMKKLQSEVRQVVKDKHNITDDDIEKMHYLKAVMKETMRFHTPIPLLVPRVARNDVEVMGYDVPVGTMVMINAWAIGRDPTSWDEPEKFRPERFLNSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELPHECRELDMSERPGV 487          
The following BLAST results are available for this feature:
BLAST of CK937540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 439
Match NameE-valueIdentityDescription
C76C4_ARATH5.629e-5558.06Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH3.649e-5457.53Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH1.435e-5054.30Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH2.447e-5054.30Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU2.072e-4952.977-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76A1_SOLME2.992e-4850.54Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C76A2_SOLME8.147e-4647.31Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C80B1_ESCCA1.699e-4346.49(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C80B2_ESCCA2.898e-4346.49(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C71A8_MENPI7.137e-4247.28Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004779_C06 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0003_IIIF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937540 ID=CK937540; Name=CK937540; organism=Citrus sinensis; type=EST; length=540bp
GATGCCAAATTTTTCTTCCATATCCATGTTCTCATCTTCCAGCTTCCAAT
CAAAGGAGTTAATGAGTGAACCCAACATTAGATGTAACATTCTAATTGCC
AACGGCAAACCAGGACATATTCGCCGGCCGGATCCAAAGGGGATCAGCTC
AAAATTTCTGCCTTTGAAATCGAGATTTGACCCCAAGAATCTCTCAGGCA
TAAAAGAAAGAGGGTTCTCCCATGTGAGTTCATCTCTGCCAATTGCCCAC
GCATTAACAAAAACCTGTGCTCCTTTTGGAACTATGAAGCCCGCAATTTC
TACGTCGGCTAAAGCTTTACGAGGAAGTAACAAGGGAACTGCTGGGTGCA
GCCTCAAGGTTTCTTTGACTACTGCTTGTAGATAAGCATCCGGACTGCGG
AGTAGCTCCGCCATCGCCCATTCCAGTGTGCTTGAAGTGGTGTCAGTCCC
AGCAACAAACAAATCCTGTTATATAAACCCCTGTTAAATCACTTGAAATT
TGTGCAAGCAAAAAGGAGGAAAGAGAAATAAAGAAATATT
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