CX675328

Overview
NameCX675328
Unique NameCX675328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8360 contig Csv1_Contig8360:941..1770. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675328 vs. ExPASy Swiss-Prot
Match: LIP1_ARATH (Triacylglycerol lipase 1 OS=Arabidopsis thaliana GN=LIP1 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.718e-43
Identity = 79/113 (69.91%), Postives = 94/113 (83.19%), Query Frame = -2
Query:  488 EPHPSSAKNIHHLFQMIRQGTFSQYDYGFFKNLRLYGQTKPPAFDLTRIPKSLPLWMSYGGNDALADVIDVQHTLNELQSTPELVYLENYGHMDFILSINGKEDLYNNMIGFF 826
            EPHPSS KNI HLFQMIR+GTF+QYDYG+FKNLR YG +KPP F L+ IP SLP+WM YGG D LADV DV+HTL EL S+PEL+YLE+YGH+DF+L  + KED+Y +MI FF
Sbjct:  272 EPHPSSVKNIRHLFQMIRKGTFAQYDYGYFKNLRTYGLSKPPEFILSHIPASLPMWMGYGGTDGLADVTDVEHTLAELPSSPELLYLEDYGHIDFVLGSSAKEDVYKHMIQFF 384          
BLAST of CX675328 vs. ExPASy Swiss-Prot
Match: LIP2_ARATH (Triacylglycerol lipase 2 OS=Arabidopsis thaliana GN=LIP2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.730e-19
Identity = 47/119 (39.50%), Postives = 75/119 (63.03%), Query Frame = -2
Query:  488 NEPHPSSAKNIHHLFQMIRQGTFSQYDYGFF-KNLRLYGQTKPPAFDLTRIPKSLPLWMSYGGNDALADVIDVQHTLNELQ----STPELVYLENYGHMDFILSINGKEDLYNNMIGFF 829
            NEP  +S KN+ HL Q +R     +Y+YG   +N++ YGQ  PPA++++ IP  LPL+ SYGG D+LADV DV+  L++ +        + ++++Y H DFI+ +  K+ +YN +  FF
Sbjct:  296 NEPQSTSTKNMIHLAQTVRDKELRKYNYGSSDRNIKHYGQAIPPAYNISAIPHELPLFFSYGGLDSLADVKDVEFLLDQFKYHDIDKMNVQFVKDYAHADFIMGVTAKDVVYNQVATFF 414          
BLAST of CX675328 vs. ExPASy Swiss-Prot
Match: LIPG_CANFA (Gastric triacylglycerol lipase OS=Canis familiaris GN=LIPF PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.604e-11
Identity = 38/115 (33.04%), Postives = 66/115 (57.39%), Query Frame = -2
Query:  497 NEPHPSSAKNIHHLFQMIRQGTFSQYDYGF-FKNLRLYGQTKPPAFDLTRIPKSLPLWMSYGGNDALADVIDVQHTLNELQSTPELVY---LENYGHMDFILSINGKEDLYNNMI 829
            + P  +S +N+ H  Q ++ G F  +D+G   +N+  Y Q+ PP ++LT +   + +W   GGND LAD  DV   L++L   P L+Y   +  Y H+DFI +++  + +YN ++
Sbjct:  281 HNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWN--GGNDLLADPHDVDLLLSKL---PNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIV 390          
The following BLAST results are available for this feature:
BLAST of CX675328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
LIP1_ARATH1.718e-4369.91Triacylglycerol lipase 1 OS=Arabidopsis thaliana G... [more]
LIP2_ARATH1.730e-1939.50Triacylglycerol lipase 2 OS=Arabidopsis thaliana G... [more]
LIPG_CANFA8.604e-1133.04Gastric triacylglycerol lipase OS=Canis familiaris... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_61E04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-61E04-J7-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675328 ID=CX675328; Name=CX675328; organism=Citrus sinensis; type=EST; length=830bp
TAAATGAGAAAGGATGAGGTCGCTCGTACTTAATGGCAAAAGACAAAACA
CATCAAGCTGAAAGTAAAATAATTTTTGGATTCTATAGTTTGTTTCTATC
TAACTTTTTCCAACCTCTTCTGCTCCCCCCAATAAATGACGCAATCAATT
CGTCGTTGCACATCACATCACCGAGAGTGACGATAGTTCACGAAGTGAAG
ACGACAAGTCGACAACAACACCTTTACGTTAAGAGCTTCTGCCCCGACGA
CAAAGTCAACAGGTGCATACGTACGCACGTACATACACATTATCTCCAAA
TACTATGGCGTGCGTATGTGTTCAGCAATCCTTTTTCCCTCTAATGTTAG
AAAGACAAGAAAGAGAGAGAAATTTATATTTACAATAAATATACAGAAAT
ATTATCTGTAAGCACCTAATTAAGGATTGAACTTTATCAGATTCAAAAGC
ACTCCCATCAAGAGCTGCTAGACTTTCCCAAAGAACTGAAAAATCCAATC
ATATTGTTGTAAAGATCTTCCTTCCCATTTATGCTCAAAATAAAGTCCAT
ATGACCGTAGTTCTCAAGATAAACCAACTCCGGAGTGGACTGCAACTCAT
TGAGAGTGTGCTGCACATCTATCACGTCTGCTAAAGCATCATTTCCCCCA
TAACTCATCCATAATGGTAAGGACTTGGGGATGCGGGTAAGATCGAATGC
TGGGGGTTTCGTCTGACCATATAGCCTCAGGTTTTTGAAAAACCCATAGT
CATACTGGGAAAAAGTGCCCTGACGGATCATCTGGAACAGATGATGAATG
TTTTTTGCAGAAGAAGGGTGAGGTTCATTT
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