CX675313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675313 vs. ExPASy Swiss-Prot
Match: PAO2_ARATH (Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 8.449e-67 Identity = 123/145 (84.83%), Postives = 132/145 (91.03%), Query Frame = 1 Query: 1 GHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLERYGELDLFQPVMGEETPISVPFLISRL 435 GH VLVYMPAGQLA+DIEKMSDEAAANFA QL++ILPDA P+QYLVS WG+D NS+GSYSYD VGK HDLYERLR+PVDNLFFAGEATS S+PGSVHGA+STGLMAAEDCRMRVLERYGELDLFQPVMGEE P SVP LISRL Sbjct: 346 GHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILPDALPPVQYLVSRWGSDVNSMGSYSYDIVGKPHDLYERLRVPVDNLFFAGEATSSSFPGSVHGAYSTGLMAAEDCRMRVLERYGELDLFQPVMGEEGPASVPLLISRL 490
BLAST of CX675313 vs. ExPASy Swiss-Prot
Match: PAO3_ARATH (Polyamine oxidase 3 OS=Arabidopsis thaliana GN=PAO3 PE=1 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.633e-60 Identity = 116/144 (80.56%), Postives = 126/144 (87.50%), Query Frame = 1 Query: 4 HCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLERYGELDLFQPVMGEETPISVPFLISRL 435 H VLVYMPAGQLARDIEK SDEAAANFAF+QL+KILPDASSPI YLVS WG+D NSLGSYSYD V K HDLYERLR+P+DNLFFAGEATS SYPGSVHGA+STG++AAEDCRMRVLERYGEL + M EE P SVP LISR+ Sbjct: 348 HPVLVYMPAGQLARDIEKKSDEAAANFAFSQLQKILPDASSPINYLVSRWGSDINSLGSYSYDIVNKPHDLYERLRVPLDNLFFAGEATSSSYPGSVHGAYSTGVLAAEDCRMRVLERYGEL---EHEMEEEAPASVPLLISRM 488
BLAST of CX675313 vs. ExPASy Swiss-Prot
Match: PAO4_ARATH (Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.406e-37 Identity = 79/150 (52.67%), Postives = 101/150 (67.33%), Query Frame = 1 Query: 1 GHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLERYGELDLFQPV--MGEETPI---SVPFLISRL 435 GH VLVYM AG LA+D+EK+SDEA ANF QLKK+ PDA P QYLV+ WGTD N+LG Y+YD VG DLY RL PVDN+FF GEA ++ + GS HGAF G+ A+++C+ + ER G + + V MG + +VP ISR+ Sbjct: 348 GHPVLVYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPDAPDPAQYLVTRWGTDPNTLGCYAYDVVGMPEDLYPRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQNCQRYIFERLGAWEKLKLVSLMGNSDILETATVPLQISRM 497
BLAST of CX675313 vs. ExPASy Swiss-Prot
Match: LDL1_ORYSJ (Lysine-specific histone demethylase 1 homolog 1 OS=Oryza sativa subsp. japonica GN=Os02g0755200 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 45/129 (34.88%), Postives = 66/129 (51.16%), Query Frame = 1 Query: 1 GHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILP----DASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPV-DNLFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLERYGELD 372 G +L+ + AG+ A + EK S L+KI + P+Q + + WGTD + GSYSY +G S D Y+ L V D +FFAGEAT+ YP ++HGA +G A + R ++D Sbjct: 596 GGPLLIALVAGESAIEFEKTSPAENVEKVLETLRKIFSPKGIEVPKPLQAICTRWGTDKFTYGSYSYVAIGSSGDDYDILAESVCDRVFFAGEATNRRYPATMHGALLSGYREAANIVRAARRRAKKVD 724
BLAST of CX675313 vs. ExPASy Swiss-Prot
Match: LDL3_ORYSJ (Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa subsp. japonica GN=Os04g0560300 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 46/125 (36.80%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 1 GHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILP----DASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDN--LFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 357 G +L+ + AG+ A + E A + L+ I + P+Q + + WGTD+ SLGSYS+ VG S D Y+ L V + LFFAGEAT+ YP ++HGAF +GL A + + R Sbjct: 516 GGPLLMALVAGEAAHNFETTPPTDAVSSVLKILRGIYEPQGIEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILAESVGDGRLFFAGEATTRRYPATMHGAFISGLREAANITLHANAR 640
BLAST of CX675313 vs. ExPASy Swiss-Prot
Match: LDL3_ORYSI (Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa subsp. indica GN=B0103C08-B0602B01.13 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12 Identity = 46/125 (36.80%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 1 GHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILP----DASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDN--LFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLER 357 G +L+ + AG+ A + E A + L+ I + P+Q + + WGTD+ SLGSYS+ VG S D Y+ L V + LFFAGEAT+ YP ++HGAF +GL A + + R Sbjct: 516 GGPLLMALVAGEAAHNFETTPPTDAVSSVLKILRGIYEPQGIEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILAESVGDGRLFFAGEATTRRYPATMHGAFISGLREAANITLHANAR 640
BLAST of CX675313 vs. ExPASy Swiss-Prot
Match: LDL1_ARATH (Lysine-specific histone demethylase 1 homolog 1 OS=Arabidopsis thaliana GN=LDL1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 51/137 (37.23%), Postives = 68/137 (49.64%), Query Frame = 1 Query: 1 GHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKI-------LPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDN--LFFAGEATSMSYPGSVHGAFSTGLMAAEDCRMRVLERYGELDLFQP 384 G +LV + AG A E +S + L+ I +PD P+Q L S WG D S GSYSY VG S D Y+ L V + +FFAGEAT+ YP ++HGAF +G+ A + +RV R P Sbjct: 586 GGPLLVALVAGDAAERFETLSPTDSVKRVLQILRGIYHPKGIVVPD---PVQALCSRWGQDKFSYGSYSYVAVGSSGDDYDILAESVGDGRVFFAGEATNRQYPATMHGAFLSGMREAANI-LRVARRRASSSALNP 718
BLAST of CX675313 vs. ExPASy Swiss-Prot
Match: LDL3_ARATH (Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana GN=FLD PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 46/115 (40.00%), Postives = 60/115 (52.17%), Query Frame = 1 Query: 1 GHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILP----DASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPVDN--LFFAGEATSMSYPGSVHGAFSTGLMAA 327 G +L+ + AG+ A E M A L+ I + P+Q + + WG D SLGSYS VG S D Y+ L V + LFFAGEAT+ YP ++HGAF TGL A Sbjct: 502 GGALLIALVAGEAAHKFETMPPTDAVTRVLHILRGIYEPQGINVPDPLQTVCTRWGGDPFSLGSYSNVAVGASGDDYDILAESVGDGRLFFAGEATTRRYPATMHGAFVTGLREA 616
BLAST of CX675313 vs. ExPASy Swiss-Prot
Match: LDL2_ORYSJ (Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa subsp. japonica GN=Os08g0143400 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 47/117 (40.17%), Postives = 63/117 (53.85%), Query Frame = 1 Query: 1 GHCVLVYMPAGQLARDIEKMSDEAAANFAFTQLKKI-------LPDASSPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPV-DNLFFAGEATSMSYPGSVHGAFSTGLMAA 327 G VL+ + AG+ A + EK+ A + LK I +PD PIQ + WG+D GSYS+ VG S Y+ L V D LFFAGEAT+ +YP ++HGA +GL A Sbjct: 479 GGAVLIALVAGEAALEFEKVDPAVALHRVLGILKGIYGPKGVTVPD---PIQSCCTRWGSDPLCSGSYSHIRVGSSGTDYDILAESVNDRLFFAGEATNRAYPATMHGALLSGLREA 592
BLAST of CX675313 vs. ExPASy Swiss-Prot
Match: LSDA_DROME (Possible lysine-specific histone demethylase 1 OS=Drosophila melanogaster GN=Su(var)3-3 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 1 Query: 10 VLVYMPAGQLARDIEKMSDEAAANFAFTQLKKILPDAS--SPIQYLVSHWGTDANSLGSYSYDTVGKSHDLYERLRIPV-----------DNLFFAGEATSMSYPGSVHGAFSTGLMAA 327 VL+ + AG A +E ++D+ + LK I + S P + +V+ W +D + GSYSY +VG S Y+ L PV LFFAGE T +YP +VHGA+ +GL A Sbjct: 703 VLLALVAGMAANLVESVTDDIIIGRCMSVLKNIFGNTSVPQPKETVVTRWRSDPWARGSYSYVSVGSSGSDYDLLAAPVIPPSSKDAEGLPRLFFAGEHTIRNYPATVHGAYLSGLREA 821 The following BLAST results are available for this feature:
BLAST of CX675313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675313 ID=CX675313; Name=CX675313; organism=Citrus sinensis; type=EST; length=705bpback to top |