CK937422

Overview
NameCK937422
Unique NameCK937422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK937422 vs. ExPASy Swiss-Prot
Match: Y1648_ARATH (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.312e-48
Identity = 114/215 (53.02%), Postives = 140/215 (65.12%), Query Frame = 3 
Query:  108 MGNTIGGRRK-AKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPRQQLKPKKVYFLVELPKLPDEEKIT--------RRVRSGIQMSAKDRLECLMLSRRAVSDLTAVNVRSSHGSEVARGPGTGQMRVKMRLPRAQVEKLMEESANDGE-VAEKIVDLYVEKS-------XXXXXXXRCYSGELRPEEEWK--AGQGG 695
            MGN+I  +RK AKVMKIDGET ++KTP+ A EV  DYPGYVLLDS+AVKHFG+R+KPLEP Q LKPKK YFLVELPKLP E            RRV SGI + AK+RL+ LMLSRR VSD+T    RS  G       G G   V++RLPR+Q+ KLMEE+ ND   +AEKI+ +Y+E+S                 SGE++  E+    AG+GG
Sbjct:    1 MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEPNQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSDVTI--GRSDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIYMERSGELGGGRGGVDGRRELGSGEIKAREKQVSFAGEGG 213
The following BLAST results are available for this feature:
BLAST of CK937422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1648_ARATH2.312e-4853.02Uncharacterized protein At1g66480 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004510_A10 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IF_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937422 ID=CK937422; Name=CK937422; organism=Citrus sinensis; type=EST; length=709bp
ACAATAATCCCAAAGAATTTCCTCAGATTCACACCTCACGAAATTTGCAT
TTAAATTGCAAATCATAATTAACAAGCTCCAACGCATTCAAAATAAAGTA
TTAAGATATGGGGAACACAATAGGTGGAAGAAGGAAAGCAAAAGTGATGA
AGATTGATGGAGAAACAATAAAATTAAAGACTCCAATTCAGGCTAGTGAA
GTTGTTAAAGACTACCCAGGTTATGTTCTATTGGATTCAGAAGCTGTGAA
GCATTTTGGCATTAGGGCAAAACCCTTGGAGCCACGGCAACAACTTAAGC
CCAAGAAAGTATATTTCTTGGTGGAGCTGCCCAAGCTTCCTGATGAGGAA
AAGATCACGAGAAGAGTGCGTTCTGGGATTCAGATGAGCGCTAAGGACAG
GCTCGAGTGCTTGATGCTGTCAAGGAGGGCGGTTTCGGATCTTACTGCGG
TTAATGTAAGGTCGAGCCACGGCAGTGAGGTGGCACGGGGACCGGGGACG
GGTCAGATGAGGGTCAAAATGAGGCTGCCTAGGGCTCAAGTTGAGAAGTT
GATGGAAGAGAGTGCAAATGATGGAGAGGTGGCTGAAAAGATTGTTGATC
TTTATGTGGAAAAATCCGGTGGAGGCGGCGGCGGCGGACGTTGCTACAGT
GGTGAGCTTCGGCCGGAGGAGGAATGGAAGGCGGGTCAAGGTGGCGTCAG
AAGAGATTT
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