CK937414

Overview
NameCK937414
Unique NameCK937414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length432
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937414 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 7.987e-35
Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 2
Query:    2 GKLVLVGVPDKPLELPVISLIMGRKTVSGSSIGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 259
            GKLV+VG P+KPLELPV  L+MGRK V+GS IGGMKETQEMIDFAA+HNITADIEVI +DY+NTAMERL KADVRYRFVIDI NTL
Sbjct:  270 GKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTL 355          
BLAST of CK937414 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 5.177e-34
Identity = 66/86 (76.74%), Postives = 80/86 (93.02%), Query Frame = 2
Query:    2 GKLVLVGVPDKPLELPVISLIMGRKTVSGSSIGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 259
            GKLV+VG P+KPLELPV  L+MGRK ++GS+IGG+KETQEM+DFAA+HNITAD+EVI +DYVNTAMERL K+DVRYRFVID+ANT+
Sbjct:  249 GKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTI 334          
BLAST of CK937414 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.761e-34
Identity = 68/88 (77.27%), Postives = 78/88 (88.64%), Query Frame = 2
Query:    2 GKLVLVGVPDKPLELPVISLIMGRKTVSGSSIGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 265
            GK+++VGVPDKPLELPV  L+ GRK ++GS IGGMKETQEMIDFAAKH+I +DIEV+ MDYVNTAMERL K DVRYRFVID+ANTL A
Sbjct:  273 GKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360          
BLAST of CK937414 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.275e-32
Identity = 66/86 (76.74%), Postives = 76/86 (88.37%), Query Frame = 2
Query:    2 GKLVLVGVPDKPLELPVISLIMGRKTVSGSSIGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 259
            GKLV+VG P+KP ELPV SL+ GRK + G+  GG+KETQEM+DFAAKHNITAD+EVI MDYVNTAMERL K+DVRYRFVIDIANT+
Sbjct:  272 GKLVMVGAPEKPFELPVFSLLKGRKLLGGTINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTM 357          
BLAST of CK937414 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.275e-32
Identity = 69/86 (80.23%), Postives = 75/86 (87.21%), Query Frame = 2
Query:    2 GKLVLVGVPDKPLELPVISLIMGRKTVSGSSIGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 259
            GKLV+VG P+KPLELPV+ LI  RK V GS IGG+KETQEMID A KHNITADIE+IS DYVNTAMERL KADVRYRFVID+ANTL
Sbjct:  268 GKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTL 353          
BLAST of CK937414 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 1.665e-32
Identity = 63/87 (72.41%), Postives = 78/87 (89.66%), Query Frame = 2
Query:    2 GKLVLVGVPDKPLELPVISLIMGRKTVSGSSIGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLA 262
            GKL+ +G+P+KPLELP+  L++GRK V GS +GGMKETQEM+DF AKHNITADIE+I MD +NTAMERLAK+DVRYRFVID+AN+L+
Sbjct:  272 GKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSLS 358          
BLAST of CK937414 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 1.665e-32
Identity = 67/89 (75.28%), Postives = 76/89 (85.39%), Query Frame = 2
Query:    2 GKLVLVGVPDKPLELPVISLIMGRKTVSGSSIGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 268
            GKLV+VG P +PLELPV  LI GRK V GS +GG+KETQEM+D A KHNITADIE+IS DYVNTAMERLAKADV+YRFVID+ANT+  T
Sbjct:  268 GKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPT 356          
BLAST of CK937414 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.841e-32
Identity = 65/90 (72.22%), Postives = 80/90 (88.89%), Query Frame = 2
Query:    2 GKLVLVGVPDKPLELPVISLIMGRKTVSGSSIGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAATK 271
            GKLVL+G  +KP ++   SLI+GRK+++GS IGGM+ETQEMIDFAA+H I A+IE+ISMDYVNTAM+RLAK DVRYRFVIDI+NTLAAT+
Sbjct:  273 GKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAATR 362          
BLAST of CK937414 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.997e-31
Identity = 60/86 (69.77%), Postives = 77/86 (89.53%), Query Frame = 2
Query:    2 GKLVLVGVPDKPLELPVISLIMGRKTVSGSSIGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 259
            GKL++VG+PDKPL+LPV  LI GR+T++GS IGG+KETQEMIDFAAK+NI AD+EVI +DY+NTAM+RL K+DV+YRFVID+  +L
Sbjct:  272 GKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSL 357          
BLAST of CK937414 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.736e-30
Identity = 61/89 (68.54%), Postives = 74/89 (83.15%), Query Frame = 2
Query:    2 GKLVLVGVPDKPLELPVISLIMGRKTVSGSSIGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 268
            GKLVL+G  +KPLELP   LI+GRK V G+ +GG+KETQEMIDF+ KHN+  +IEV+ MDYVN AM+RLAKADV+YRFVID+ANTL  T
Sbjct:  274 GKLVLIGAIEKPLELPPFPLILGRKLVGGTLVGGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANTLKPT 362          
The following BLAST results are available for this feature:
BLAST of CK937414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
MTDH_FRAAN7.987e-3582.56Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_PETCR5.177e-3476.74Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
MTDH_MESCR6.761e-3477.27Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH_APIGR1.275e-3276.74Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH8_ARATH1.275e-3280.23Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
CADH9_ARATH1.665e-3272.41Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
CADH7_ARATH1.665e-3275.28Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH6_ARATH2.841e-3272.22Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
GEDH1_OCIBA6.997e-3169.77Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
MTDH3_STYHU7.736e-3068.54Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004510_B06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937414 ID=CK937414; Name=CK937414; organism=Citrus sinensis; type=EST; length=432bp
GGGCAAGCTTGTTCTGGTTGGTGTTCCGGACAAGCCACTCGAGCTACCTG
TGATTTCCTTAATTATGGGGAGGAAGACGGTGTCAGGGAGCAGCATTGGG
GGAATGAAAGAGACGCAAGAGATGATTGATTTTGCAGCAAAACACAATAT
AACAGCTGACATTGAGGTTATTTCGATGGATTATGTCAATACGGCAATGG
AGCGGCTTGCCAAGGCTGATGTTCGGTATCGATTTGTCATTGATATTGCA
AACACCTTGGCTGCCACCAAACCTTGAAGAATCAGAATCAGAATCAGATT
GGTGTCTTCAATTCACAACTTTGTTCCATGATCCACTTTGCTATATGTAA
TGCTCCCTCGATCATTACACTCTTTTAGCGCTTAAAATACTTTTAATTTT
CAGATACATCGACCCTAATTATGTCGTGATTG
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