CK937412

Overview
NameCK937412
Unique NameCK937412
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length414
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.018e-48
Identity = 93/137 (67.88%), Postives = 99/137 (72.26%), Query Frame = 3
Query:    3 IKNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            IKND GMSNYPM                 + F              C NCRPC +D+EQYCNKKIWSYNDVY DGKPTQGGFA +MVVDQKFVVKIPDGMA EQAAPLLCAGVTV+SPL+HFGLKQSGLRGGILGLG
Sbjct:   54 IKNDLGMSNYPMVPGHEVVGEVVEVGSEVTKFRAGDVVGVGCIVGSCGNCRPCNSDIEQYCNKKIWSYNDVYPDGKPTQGGFAGAMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLNHFGLKQSGLRGGILGLG 190          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.308e-47
Identity = 93/138 (67.39%), Postives = 100/138 (72.46%), Query Frame = 3
Query:    3 IKNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQ-SGLRGGILGLG 413
            IKND G SNYPM                 + F             CC+ CRPC+ADVEQYCNKKIWSYNDVYTDGKPTQGGF+  MVVDQKFVVKIPDGMA EQAAPLLCAGVTV+SPL+HFGLK+ SGLRGGILGLG
Sbjct:   54 IKNDLGASNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKEISGLRGGILGLG 191          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 2.914e-47
Identity = 89/137 (64.96%), Postives = 100/137 (72.99%), Query Frame = 3
Query:    3 IKNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            IKND GMS+YPM                 + F              C+NC PC++++EQYCNKKIWSYNDVYTDGKPTQGGFAESMVV QKFVV+IPDGM+ EQAAPLLCAG+TV+SPL HFGLKQSGLRGGILGLG
Sbjct:   54 IKNDLGMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFGLKQSGLRGGILGLG 190          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 3.806e-47
Identity = 89/137 (64.96%), Postives = 99/137 (72.26%), Query Frame = 3
Query:    3 IKNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            +KND GMSNYP+                 S F              CRNC PC+ D+EQYCNKKIW+ NDVYTDGKPTQGGFA+SMVVDQKFVVKIP+GMA EQAAPLLCAG+TV+SPL+HFG KQSGLRGGILGLG
Sbjct:   54 VKNDLGMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLG 190          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.971e-47
Identity = 87/137 (63.50%), Postives = 101/137 (73.72%), Query Frame = 3
Query:    3 IKNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            IKND GMSNYPM                 S F             CC +C+PC +++EQYCNK+IWSYNDVYTDGKPTQGGFA++M+V+QKFVVKIP+GMA+EQAAPLLCAGVTV+SPLSHFGL  SGL+GGILGLG
Sbjct:   55 IKNDLGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLKGGILGLG 191          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.224e-45
Identity = 87/137 (63.50%), Postives = 98/137 (71.53%), Query Frame = 3
Query:    3 IKNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            IKND GMSNYPM                 + F             CC++CR C++++EQYCNKKIWSYNDVYTDGK TQGGFAES VV+QKFVVKIP+G+A EQ APLLCAGVTV+SPLSHFGLK  GLRGGILGLG
Sbjct:   55 IKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLG 191          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 7.937e-45
Identity = 88/136 (64.71%), Postives = 94/136 (69.12%), Query Frame = 3
Query:    6 KNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            KN  G S YPM                 S +             CCR+CRPC+A+VEQYCNKKIWSYNDVYTDGKPTQGGFA SMVVDQKFVVKIP G+A EQAAPLLCAGVTV+SPL HFGL   GLRGGILGLG
Sbjct:   56 KNHLGASKYPMVPGHEVVGEVVEVGPEVSKYSVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGKPTQGGFAGSMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGLMTPGLRGGILGLG 191          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 7.937e-45
Identity = 87/136 (63.97%), Postives = 95/136 (69.85%), Query Frame = 3
Query:    6 KNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            KND GMSNYPM                 S F             CC  C PCE D+EQYC KKIWSYNDVY +G+PTQGGFA++ VV QKFVVKIP+GMA+EQAAPLLCAGVTV+SPLSHFGLKQ GLRGGILGLG
Sbjct:   55 KNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLG 190          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.768e-44
Identity = 84/137 (61.31%), Postives = 94/137 (68.61%), Query Frame = 3
Query:    3 IKNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            +KND GMSNYP+                 S F              CRNC PC+ ++EQYCNKKIW+ NDVYTDGKPTQGGFA SMVVDQ FVVKIP+GMA EQAAPLLCAG+TV+SP +HFG  QSG RGGILGLG
Sbjct:   54 VKNDLGMSNYPLVPGHEVVGKVVEVGADVSKFKVGDTVGVGLLVGSCRNCGPCKREIEQYCNKKIWNCNDVYTDGKPTQGGFANSMVVDQNFVVKIPEGMAPEQAAPLLCAGITVYSPFNHFGFNQSGFRGGILGLG 190          
BLAST of CK937412 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.497e-43
Identity = 83/137 (60.58%), Postives = 95/137 (69.34%), Query Frame = 3
Query:    3 IKNDKGMSNYPMXXXXXXXXXXXXXXXXXSNFXXXXXXXXXXXXXCCRNCRPCEADVEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVDQKFVVKIPDGMALEQAAPLLCAGVTVFSPLSHFGLKQSGLRGGILGLG 413
            IKND GMS+YPM                 + +             CCR+C PC +D EQYCNKKIW+YNDVYTDGKPTQGGFA  +VV ++FVVKIPDG+  EQAAPL+CAGVTV+SPL  FGLKQSGLRGGILGLG
Sbjct:   54 IKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCSPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGERFVVKIPDGLESEQAAPLMCAGVTVYSPLVRFGLKQSGLRGGILGLG 190          
The following BLAST results are available for this feature:
BLAST of CK937412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
CADH1_OCIBA2.018e-4867.88Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH1_ARACO1.308e-4767.39Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH_POPDE2.914e-4764.96Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH1_TOBAC3.806e-4764.96Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH4_ARATH4.971e-4763.50Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH_MEDSA1.224e-4563.50Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH_LOLPR7.937e-4564.71Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH5_ARATH7.937e-4563.97Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH2_TOBAC1.768e-4461.31Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH_EUCGL1.497e-4360.58Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004510_B04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IF_B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937412 ID=CK937412; Name=CK937412; organism=Citrus sinensis; type=EST; length=414bp
AAATAAAAAATGATAAGGGCATGTCTAACTATCCGATGGTTCCAGGACAT
GAGGTGGTGGGTGAAGTGAAGGAAGTGGGTTCAGAAGTGAGCAACTTTAA
AGTAGGAGATAAGGTTGGTGTTGGGGTTCTCGTTGGTTGTTGCAGAAACT
GCAGGCCGTGCGAGGCAGATGTTGAGCAGTACTGCAATAAGAAAATCTGG
TCCTATAACGATGTTTACACCGATGGCAAGCCTACACAAGGCGGCTTTGC
TGAGTCCATGGTCGTTGATCAAAAGTTTGTGGTGAAAATACCAGATGGGA
TGGCACTGGAGCAGGCGGCACCGCTATTGTGTGCTGGTGTGACAGTGTTC
AGTCCCCTGAGCCACTTTGGATTGAAGCAGAGCGGGCTGAGAGGAGGAAT
CTTGGGGCTCGGAG
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