CK937408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_CITSI (Photosystem II reaction center protein K OS=Citrus sinensis GN=psbK PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.601e-27 Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 2 Query: 77 MLNMFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 MLN+FSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_JASNU (Photosystem II reaction center protein K OS=Jasminum nudiflorum GN=psbK PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.061e-24 Identity = 55/61 (90.16%), Postives = 57/61 (93.44%), Query Frame = 2 Query: 77 MLNMFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 MLN+FSL+ ICLNSALYSSSF F KLPEAYAFLNPIVDVMPVIPV FFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLISICLNSALYSSSFFFGKLPEAYAFLNPIVDVMPVIPVFFFLLAFVWQAAVSFR 61
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_VITVI (Photosystem II reaction center protein K OS=Vitis vinifera GN=psbK PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.515e-24 Identity = 54/61 (88.52%), Postives = 58/61 (95.08%), Query Frame = 2 Query: 77 MLNMFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 MLN+FSL+ ICLNSALYSS+F FAKLPEAYAFLNPIVDVMPVIP+ FFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLICICLNSALYSSNFFFAKLPEAYAFLNPIVDVMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_MORIN (Photosystem II reaction center protein K OS=Morus indica GN=psbK PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.590e-24 Identity = 55/61 (90.16%), Postives = 57/61 (93.44%), Query Frame = 2 Query: 77 MLNMFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 MLN+FSL+ ICLNS LYSSSF AKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLICICLNSVLYSSSFFVAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_GOSHI (Photosystem II reaction center protein K OS=Gossypium hirsutum GN=psbK PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.995e-24 Identity = 54/61 (88.52%), Postives = 58/61 (95.08%), Query Frame = 2 Query: 77 MLNMFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 MLN+F+L+ IC NSAL+SSSFLFAKLPEAYAFLNPIVD MPVIPVLFFLLAFVWQAAVSFR Sbjct: 1 MLNIFNLICICFNSALFSSSFLFAKLPEAYAFLNPIVDFMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_GOSBA (Photosystem II reaction center protein K OS=Gossypium barbadense GN=psbK PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.995e-24 Identity = 54/61 (88.52%), Postives = 58/61 (95.08%), Query Frame = 2 Query: 77 MLNMFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 MLN+F+L+ IC NSAL+SSSFLFAKLPEAYAFLNPIVD MPVIPVLFFLLAFVWQAAVSFR Sbjct: 1 MLNIFNLICICFNSALFSSSFLFAKLPEAYAFLNPIVDFMPVIPVLFFLLAFVWQAAVSFR 61
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_COFAR (Photosystem II reaction center protein K OS=Coffea arabica GN=psbK PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.023e-23 Identity = 52/61 (85.25%), Postives = 56/61 (91.80%), Query Frame = 2 Query: 77 MLNMFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 MLN+FSL++ICLNSALYSS F F KLPEAYAFLNPI+D MPVIPV FFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLIWICLNSALYSSGFFFGKLPEAYAFLNPIIDFMPVIPVFFFLLAFVWQAAVSFR 61
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_PHAAO (Photosystem II reaction center protein K OS=Phalaenopsis aphrodite subsp. formosana GN=psbK PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.336e-23 Identity = 52/61 (85.25%), Postives = 56/61 (91.80%), Query Frame = 2 Query: 77 MLNMFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 MLN+F L+ ICLNS LYSSSF FAKLPEAYAF NPI+DVMP+IPVLFFLLAFVWQAAVSFR Sbjct: 1 MLNIFCLICICLNSTLYSSSFFFAKLPEAYAFFNPIIDVMPIIPVLFFLLAFVWQAAVSFR 61
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_PANGI (Photosystem II reaction center protein K OS=Panax ginseng GN=psbK PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.744e-23 Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 2 Query: 77 MLNMFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 MLN+FSL+ ICLNSALYSSS FAKLPEAYAFLNPIVD+MPVIP+ FFLLAFVWQAAVSFR Sbjct: 1 MLNIFSLICICLNSALYSSSLFFAKLPEAYAFLNPIVDLMPVIPLFFFLLAFVWQAAVSFR 61
BLAST of CK937408 vs. ExPASy Swiss-Prot
Match: PSBK_LIRTU (Photosystem II reaction center protein K OS=Liriodendron tulipifera GN=psbK PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.278e-23 Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 2 Query: 77 MLNMFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSFR 259 MLN+FSL+ IC+NSAL+SSSF FAKLPEAYAF NPIVDVMPVIPVLFFLLA VWQAAVSFR Sbjct: 1 MLNIFSLICICINSALHSSSFFFAKLPEAYAFFNPIVDVMPVIPVLFFLLALVWQAAVSFR 61 The following BLAST results are available for this feature:
BLAST of CK937408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937408 ID=CK937408; Name=CK937408; organism=Citrus sinensis; type=EST; length=666bpback to top |