CK937407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937407 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 2.036e-92 Identity = 153/182 (84.07%), Postives = 163/182 (89.56%), Query Frame = 2 Query: 2 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWXXNTYLNGQSLSF 547 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG+C+EI+C ND KWCLPG+I+VTATNFC GGWCNPPQQHFDLSQPVFQ IAQYRAG+VPVAY+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH+ +KGSRTGWQ MSRNWGQNW N+YLNGQSLSF Sbjct: 37 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSF 218
BLAST of CK937407 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 2.106e-89 Identity = 148/182 (81.32%), Postives = 162/182 (89.01%), Query Frame = 2 Query: 2 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWXXNTYLNGQSLSF 547 GGDASGTMGGACGYGNLYSQGYGT+TAALSTALFNNGLSCGSC+EI+C ND KWCLPG+I+VTATNFC GGWCNPP +HFDL+QPVFQ IAQYRAG+VPV+Y+RVPC RRGGIRFTINGHSYFNLVLITNVGGAGDVH+ +IKGSRT WQ MSRNWGQNW N+YLNGQ+LSF Sbjct: 36 GGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSF 217
BLAST of CK937407 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 319.701 bits (818), Expect = 5.737e-87 Identity = 145/182 (79.67%), Postives = 157/182 (86.26%), Query Frame = 2 Query: 2 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWXXNTYLNGQSLSF 547 G DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG+C+EIKC +D WCLPG I+VTATNFC GGWCNPP HFDLSQPVFQ IAQY+AGVVPV+Y+RVPC RRGGIRFTINGHSYFNLVL+TNVGGAGDVH+V++KGSRT WQ MSRNWGQNW N LNGQ+LSF Sbjct: 40 GSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSF 221
BLAST of CK937407 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 5.025e-83 Identity = 135/182 (74.18%), Postives = 156/182 (85.71%), Query Frame = 2 Query: 2 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWXXNTYLNGQSLSF 547 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C N CLPG+I VTATNFC GGWCNPP+ HFD+++P F HIAQYRAG+VPV+++RVPC ++GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRTGWQPMSRNWGQNW N +L+GQSLSF Sbjct: 34 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSF 215
BLAST of CK937407 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 5.025e-83 Identity = 135/182 (74.18%), Postives = 156/182 (85.71%), Query Frame = 2 Query: 2 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWXXNTYLNGQSLSF 547 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C N CLPG+I VTATNFC GGWCNPP+ HFD+++P F HIAQYRAG+VPV+++RVPC ++GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRTGWQPMSRNWGQNW N +L+GQSLSF Sbjct: 34 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSF 215
BLAST of CK937407 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 6.563e-83 Identity = 139/183 (75.96%), Postives = 156/183 (85.25%), Query Frame = 2 Query: 2 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPMSRNWGQNWXXNTYLNGQSLSF 547 G DASGTMGGACGYGNLY QGYGTNTAALSTALFNNGL+CG+CYE+KC +DP+WCL TI VTATNFC GGWCNPP QHFDL++P F IAQYRAG+VPV+++RVPC ++GGIRFTINGHSYFNLVLI+NVGGAGDVHAVSIKGS+T WQ MSRNWGQNW N+Y+N QSLSF Sbjct: 40 GEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSF 222
BLAST of CK937407 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 301.597 bits (771), Expect = 1.617e-81 Identity = 132/182 (72.53%), Postives = 152/182 (83.52%), Query Frame = 2 Query: 2 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWXXNTYLNGQSLSF 547 GGDASGTMGGACGYGNLYS GYGTNTAALST LFN+G +CGSCYE++C ND +WCLPG++ VTATN C GGWCNPP+ HFD+++P F I YRAG+VPV+Y+RVPC ++GGIRFTINGHSYFNLVL+TNV G GDV +VSIKGS TGWQPMSRNWGQNW N+YL+GQSLSF Sbjct: 39 GGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSF 220
BLAST of CK937407 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 2.111e-81 Identity = 137/182 (75.27%), Postives = 151/182 (82.97%), Query Frame = 2 Query: 2 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWXXNTYLNGQSLSF 547 G DASGTMGGACGYGNLYSQGYGTNTAALSTALFN G SCG+C++IKCV+DPKWC+ GTI VT TNFC GGWCNPPQ HFDL+QP+F IAQY+AGVVPV Y+RV C R+GGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ T WQ MSRNWGQNW N L+GQ+LSF Sbjct: 39 GADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSF 220
BLAST of CK937407 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 3.049e-80 Identity = 133/184 (72.28%), Postives = 152/184 (82.61%), Query Frame = 2 Query: 2 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWXXNTYLNGQSLSF 547 G DASGTMGGACGYGNLYSQGYGTNTAALSTALFNNG+SCG+C+E+KC NDP+WC G+ I++TATNFC GGWCNPP++HFDL+ PVF IAQYRAG+VPV+Y+RVPC +RGGIRFTINGH YFNLVLITNV GAGD+ S+KGSRTGW +SRNWGQNW N L GQ+LSF Sbjct: 41 GSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSF 224
BLAST of CK937407 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 3.727e-78 Identity = 130/184 (70.65%), Postives = 149/184 (80.98%), Query Frame = 2 Query: 2 GGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWXXNTYLNGQSLSF 547 G DASGTMGGACGYGNLYSQGYGTNTAALST+LFN+G SCG+C+EIKCVNDPKWC PG ++ VTATNFC GGWCNPP+ HFDL+ PVF IA+YRAG+VP++Y+RV C + GGIRFTINGH YFNLVLITNV GAGD+ S+KGS+TGW ++RNWGQNW N L GQSLSF Sbjct: 44 GNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSF 227 The following BLAST results are available for this feature:
BLAST of CK937407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937407 ID=CK937407; Name=CK937407; organism=Citrus sinensis; type=EST; length=548bpback to top |