CX675308

Overview
NameCX675308
Unique NameCX675308
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.266e-68
Identity = 133/202 (65.84%), Postives = 154/202 (76.24%), Query Frame = 2
Query:    8 PVSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLPRENIQVATKFGFAELGLDAVI-----VKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRGFF-GGKAVVESVPPDSF 595
            P  E D I +I HA N GIT  DT+D YGP+TNEILLGKALK   RE + +ATKFG   LG +        V G+P YVR+ CEASLKRLD++ IDLYYQHRVDT VPIE T+GE+KKLVEEGK+KYIGLSEAS  TIRRAHAVHPITAVQLEWSLW+RD+E EI+P CRELGIGIV YSPLGRGF   G  ++E +  + +
Sbjct:   37 PKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIV-LGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDMSNEDY 237          
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.993e-66
Identity = 128/199 (64.32%), Postives = 153/199 (76.88%), Query Frame = 2
Query:    8 PVSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLPRENIQVATKFG--FAELGLDAVIVKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRGFF-GGKAVVESVPPDSF 595
            P  E + I +I HA + G+TF DT+D YGP+TNE+LLGKAL+   RE +++ATKFG  FA+   +   + G+P YVR+ CE S KRL V+ IDLYYQHR+D  VPIE TIGE+KKLVEEGKIKYIGLSEAS  TIRRAHAVHPITAVQLEWSLW+RD E +I+P CRELGIGIV YSPLGRGFF  G  +V+S+    F
Sbjct:   37 PKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFGVSFADGKRE---IHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFFSSGAKLVDSLSEQDF 232          
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.675e-37
Identity = 86/189 (45.50%), Postives = 121/189 (64.02%), Query Frame = 2
Query:    8 PVSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLPR-ENIQVATKFGFAELGLDAVIVKGN-PEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWTRDIENE---IVPLCRELGIGIVPYSPLGRGFFGG 559
            P SEE   +++ HA + G TF+D++D YG   NE  +G+  K   R + I +ATKFG+ +      +   N P+Y+    + SLKRL ++ IDLYY HR     PIE+ +G +KK VE GKI+YIGLSE S +TIRRA AV+P++AVQ+E+S ++ +IE     ++  CRE  I IV Y+PLGRGF  G
Sbjct:   29 PSSEEANQAVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTG 217          
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.232e-27
Identity = 73/189 (38.62%), Postives = 113/189 (59.79%), Query Frame = 2
Query:   17 EEDGISIIKHAFNKGITFFDTADKYG---PYTNEILLGKALKMLPRENIQVATKFGFAELGLD--AVIVKGNPEYVRSCCEASLKRL-DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWTRDIE-NEIVPLCRELGIGIVPYSPLGRGFFGGK 562
            +E+   ++ +A ++G  ++D  + YG   P +N  LL +  +  P    +V   F   + GLD   ++  GNP++V    E  +  L   + +DL+   RVD +VPIE T+  +K  V+ GKI  +GLSE S +TI+RAHAV PI AV++E+SL++RDIE N I+ +CR+L I I+ YSP  RG   G+
Sbjct:   28 DEEAFEVMNYALSQGSNYWDAGEFYGVDPPTSNLDLLARYFEKYPENANKV---FLSVKGGLDFKTLVPDGNPDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRGLLTGR 213          
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.813e-26
Identity = 70/194 (36.08%), Postives = 108/194 (55.67%), Query Frame = 2
Query:   11 VSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLP-RENIQVATKFGFAELGLDAVIVKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRGFFGGKAVVESVPPD 589
            +++E G  +++ A + G+ F DTA  YG   +E L+G+ ++    R  + +ATK    E+   ++ +  + E++RS  E SLKRL  +YIDLYY H  D   P+ E  G +K+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E E++P C + GI  +PY PL  G   GK   ++V  D
Sbjct:   33 LNDETGKDLVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATKGAHKEVD-GSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLTGKFTQDTVFDD 225          
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.275e-26
Identity = 63/196 (32.14%), Postives = 108/196 (55.10%), Query Frame = 2
Query:   11 VSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLPRENIQVATKFGFAELGLDAVIVKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRGFFGGKAVVESVPPDSFL 598
            ++EE G  +++ A   G+T  DTA  YG   +E L+G+ L+   RE++ +ATK    + G D V    +P++++   + SLKRL+ +YIDL+Y H  D   P +E +  + ++ + GKI+ IG+S  S + ++ A+    +  +Q E++L  R+ E    P  +E  I  +PY PL  G   GK   ++  P+  L
Sbjct:   32 LNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVF-DNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDL 226          
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: YDJG_ECOLI (Uncharacterized oxidoreductase ydjG OS=Escherichia coli (strain K12) GN=ydjG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.005e-25
Identity = 72/206 (34.95%), Postives = 106/206 (51.46%), Query Frame = 2
Query:    2 NSPVSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLPRENIQVATKFG---------FAELGLDAVIVKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTS---VPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRGFFGGKAVVESVP 583
            N  +  +  I  I  A   GI   DTA  Y    +E+++G+ALK LPRE + V TK G         F ++G   +    +PE +R    ASL+RL ++YID+Y  H         PI ET+  + +L  EGKI+ IG +    D IR       +  +Q ++S+  R +ENE++PLCR+ GI +  YSPL +G   G    + VP
Sbjct:   30 NGDLDRQICIDTILEAHRCGINLIDTAPGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVP 235          
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: YH5B_SCHPO (Uncharacterized oxidoreductase C215.11c OS=Schizosaccharomyces pombe GN=SPBC215.11c PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.180e-23
Identity = 63/182 (34.62%), Postives = 101/182 (55.49%), Query Frame = 2
Query:    2 NSPVSEEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKMLPRENIQVATKFGFAELGLDAVIVKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRG 547
            + P  +E  I+ +K      I F DTAD YGP  +E LL +AL   P + + +ATK G    G +     G P+++R     S++RL V+ IDL+  HR+D  VP ++   E+  + +EG I+++GLSE + D I+ A    P+ +VQ  ++L  R  E +++  C + GI  +P+ PL  G
Sbjct:   42 DEPKDKEACIATLKRLPELNINFIDTADSYGPEVSENLLREAL--YPYKGLIIATKGGLVRTGPNEWHPCGAPKFLRQEVLMSMRRLGVKQIDLWQLHRIDPKVPRKDQFSEIAAMKKEGLIRHVGLSEVTVDDIKEAEQYFPVVSVQNLFNLVNRKNE-KVLEYCEQKGIAFIPWYPLASG 220          
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: YAJO_ECOLI (Uncharacterized oxidoreductase yajO OS=Escherichia coli (strain K12) GN=yajO PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.312e-23
Identity = 67/184 (36.41%), Postives = 106/184 (57.61%), Query Frame = 2
Query:   17 EEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALK-MLPRENIQVATKFGFAELGLDAVIVKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRG 547
            EE    IIK A   GI FFDTA+ Y   ++E ++G+AL+    RE++ VATK  F  +G D        + +RS  + SL+RL ++Y+D+   HR D + PIEET+  +  +V+ GK +YIG S       A    +++ H      ++Q  ++L  R+ E E++PLC + G+ ++P+SPL RG
Sbjct:   37 EESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKV-FHRVG-DLPEGLSRAQILRSI-DDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARG 217          
BLAST of CX675308 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.345e-21
Identity = 67/187 (35.83%), Postives = 101/187 (54.01%), Query Frame = 2
Query:   17 EEDGISIIKHAFNKGITFFDTADKYGPYTNEILLGKALKML-PRENIQVATKFGFAELGLDAVIVKGNPEYVRSCCEASLKRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWTRDIENEIVPLCRELGIGIVPYSPLGRGFFGGKAVVE 574
            E+  I  I+ A ++GIT  DTA  YG   +E ++GKA+K    R+ + +ATK    +   + +    N   +    E SLKRL  +YIDLY  H  D  VPIEET   MK+L + GKI+ IG+S  S + +    AV P+  +Q  ++L+ R++E  ++P  ++  I  + Y  L RG   GK   E
Sbjct:   33 EKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTAL-DWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEE 218          
The following BLAST results are available for this feature:
BLAST of CX675308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
A115_TOBAC4.266e-6865.84Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE3.993e-6664.32IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO8.675e-3745.50Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
PLR1_SCHPO6.232e-2738.62Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
YCCK_BACSU1.813e-2636.08Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
IOLS_BACSU5.275e-2632.14Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
YDJG_ECOLI2.005e-2534.95Uncharacterized oxidoreductase ydjG OS=Escherichia... [more]
YH5B_SCHPO4.180e-2334.62Uncharacterized oxidoreductase C215.11c OS=Schizos... [more]
YAJO_ECOLI9.312e-2336.41Uncharacterized oxidoreductase yajO OS=Escherichia... [more]
GS69_BACSU1.345e-2135.83General stress protein 69 OS=Bacillus subtilis GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_61D04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-61D04-H7-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675308 ID=CX675308; Name=CX675308; organism=Citrus sinensis; type=EST; length=807bp
CAATTCTCCAGTCTCTGAAGAGGATGGCATCTCTATAATAAAGCATGCTT
TCAATAAAGGAATCACTTTCTTTGATACTGCTGATAAATATGGACCATAT
ACTAATGAAATTCTTCTTGGAAAGGCCTTGAAGATGTTGCCCAGAGAAAA
CATACAAGTAGCCACAAAGTTTGGGTTTGCAGAATTGGGACTTGATGCTG
TGATTGTGAAGGGTAACCCTGAGTATGTGCGCTCATGTTGTGAAGCTAGC
TTGAAGCGCCTTGATGTGGAATACATTGATCTGTATTATCAACATAGAGT
GGACACATCAGTCCCCATAGAGGAAACTATTGGCGAAATGAAAAAGCTGG
TGGAAGAGGGTAAAATCAAGTACATAGGATTATCTGAGGCTAGCCCAGAT
ACAATTAGGAGAGCACATGCTGTTCATCCTATCACAGCTGTACAACTGGA
ATGGTCTCTTTGGACTCGTGACATTGAGAATGAGATAGTACCACTTTGCA
GGGAGCTTGGCATTGGAATAGTTCCATACAGTCCTCTTGGTCGTGGATTT
TTCGGTGGCAAAGCTGTTGTGGAAAGTGTGCCTCCAGATAGCTTTTTGGT
ATGTTTTTCATCAATGTTTGTCCGCATCGTTTTGTTTCATAACACAGTAT
AACATAGATGTTTTTAAGAAACAACATGAGCTTTCCAGTTTCATTTGAGA
CTAATGTTCCATATGTGGTGAAGCTTATTAAAATTCTGCATGTATCTGTT
TTATAAGAATTTTCTTCCTCGGTTCACCGGAGAGAACCTGGACAGAAACA
GGAGTAT
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