CK937349

Overview
NameCK937349
Unique NameCK937349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937349 vs. ExPASy Swiss-Prot
Match: NP1L1_MOUSE (Nucleosome assembly protein 1-like 1 OS=Mus musculus GN=Nap1l1 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 6.047e-33
Identity = 84/222 (37.84%), Postives = 117/222 (52.70%), Query Frame = 3
Query:  252 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAAL*AKYQKLYQPMYTKRYEIVNGVVEGAPNEVA-MDQEEDKATEE-------------------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPGKCLT 824
            ++  L+ +L  L    +  +E L   V++RV  L+ +Q +  ++EAKF+EE   L  KY  LYQP++ KR+EI+N + E    E      EED+ +EE                   KG+P+FWLT  KN D+LS+ + E DE  LK LKDI  K+     P  F LEF+F+PN YF N VLTKTY M  E         D P +    G +I+W  GK +T
Sbjct:   48 ILAALQERLDGLVDTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEVSEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNDYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVT 269          
BLAST of CK937349 vs. ExPASy Swiss-Prot
Match: NP1L1_PONAB (Nucleosome assembly protein 1-like 1 OS=Pongo abelii GN=NAP1L1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.347e-32
Identity = 84/222 (37.84%), Postives = 117/222 (52.70%), Query Frame = 3
Query:  252 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAAL*AKYQKLYQPMYTKRYEIVNGVVEGAPNEVA-MDQEEDKATEE-------------------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPGKCLT 824
            ++  L+ +L  L    +  +E L   V++RV  L+ +Q +  ++EAKF+EE   L  KY  LYQP++ KR+EI+N + E    E      EED+ +EE                   KG+P+FWLT  KN D+LS+ + E DE  LK LKDI  K+     P  F LEF+F+PN YF N VLTKTY M  E         D P +    G +I+W  GK +T
Sbjct:   48 ILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSGAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVT 269          
BLAST of CK937349 vs. ExPASy Swiss-Prot
Match: NP1L1_HUMAN (Nucleosome assembly protein 1-like 1 OS=Homo sapiens GN=NAP1L1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.347e-32
Identity = 84/222 (37.84%), Postives = 117/222 (52.70%), Query Frame = 3
Query:  252 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAAL*AKYQKLYQPMYTKRYEIVNGVVEGAPNEVA-MDQEEDKATEE-------------------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPGKCLT 824
            ++  L+ +L  L    +  +E L   V++RV  L+ +Q +  ++EAKF+EE   L  KY  LYQP++ KR+EI+N + E    E      EED+ +EE                   KG+P+FWLT  KN D+LS+ + E DE  LK LKDI  K+     P  F LEF+F+PN YF N VLTKTY M  E         D P +    G +I+W  GK +T
Sbjct:   48 ILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVT 269          
BLAST of CK937349 vs. ExPASy Swiss-Prot
Match: NP1L1_BOVIN (Nucleosome assembly protein 1-like 1 OS=Bos taurus GN=NAP1L1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.347e-32
Identity = 84/222 (37.84%), Postives = 117/222 (52.70%), Query Frame = 3
Query:  252 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAAL*AKYQKLYQPMYTKRYEIVNGVVEGAPNEVA-MDQEEDKATEE-------------------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPGKCLT 824
            ++  L+ +L  L    +  +E L   V++RV  L+ +Q +  ++EAKF+EE   L  KY  LYQP++ KR+EI+N + E    E      EED+ +EE                   KG+P+FWLT  KN D+LS+ + E DE  LK LKDI  K+     P  F LEF+F+PN YF N VLTKTY M  E         D P +    G +I+W  GK +T
Sbjct:   48 ILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKVEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVT 269          
BLAST of CK937349 vs. ExPASy Swiss-Prot
Match: NP1L1_XENTR (Nucleosome assembly protein 1-like 1 OS=Xenopus tropicalis GN=nap1l1 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.119e-32
Identity = 85/222 (38.29%), Postives = 118/222 (53.15%), Query Frame = 3
Query:  252 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAAL*AKYQKLYQPMYTKRYEIVNGVVEGAPNEV--AMDQEED---------KATEE---------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPGKCLT 824
            ++  L+ +L +L G  +  +E L   V++RV  L+ +Q +  ++EAKF+EE   L  KY  LYQP++ KR +I+N   E    E    +D+EED         K  EE         KG+P+FWLT  KN D+LS+ + E DE  LK LKDI  K+     P  F LEF+F+PN +F N VLTKTY M  E         D P +    G  I+W  GK +T
Sbjct:   49 VLAALQERLDDLVGTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHELERKYAALYQPLFDKRSDIINATYEPTEEECEWKVDEEEDISGDLKDKAKLEEEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSEAGQPMSFTLEFHFEPNDFFTNEVLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKGKNVT 270          
BLAST of CK937349 vs. ExPASy Swiss-Prot
Match: YGNB_SCHPO (Putative nucleosome assembly protein C2D10.11C OS=Schizosaccharomyces pombe GN=SPBC2D10.11c PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 6.686e-32
Identity = 78/216 (36.11%), Postives = 126/216 (58.33%), Query Frame = 3
Query:  231 DEGARADLVGVLKN----------KLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAAL*AKYQKLYQPMYTKRYEIVNGVVEGAPNEVAMDQE--EDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRID-DPKGFKLEFYFDPNPYFKNTVLTKTYHMIDEDEP----ILEKAIGTEIEWY-PGKCLT 824
            D+ A  ++ G+L+N          +L +L G+ S  +E L PAV+ R+  L+ +Q + D ++ +F ++   L  KY+K YQP++++R EI+ GV E   +E+  ++E  ++   + KG+P+FWLT + N  ++ E IT  DE  L+ L DI++  +  D  G+KLEF FD N YF N +LTKTY+  D+  P    + + A G +I W  P K LT
Sbjct:   48 DKSAHDEVSGLLRNNPAMLSMIEGRLSSLVGKSSGYIESLAPAVQNRITALKGLQKDCDAIQYEFRQKMLDLETKYEKKYQPIFSRRAEIIKGVSEPVDDELDHEEEIFQNNLPDPKGIPEFWLTCLHNVFLVGEMITPEDENVLRSLSDIRFTNLSGDVHGYKLEFEFDSNDYFTNKILTKTYYYKDDLSPSGEFLYDHAEGDKINWIKPEKNLT 263          
BLAST of CK937349 vs. ExPASy Swiss-Prot
Match: NPL1A_XENLA (Nucleosome assembly protein 1-like 1-A OS=Xenopus laevis GN=nap1l1-A PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.732e-32
Identity = 85/221 (38.46%), Postives = 117/221 (52.94%), Query Frame = 3
Query:  252 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAAL*AKYQKLYQPMYTKRYEIVNGVVE----------------GAPNEVAMDQEEDKATEE---KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPGKCLT 824
            ++  L+ +L +L G  +  +E L   V++RV  L+ +Q +  ++EAKF+EE   L  KY  LYQP++ KR +I+N   E                G   E A  +EE K  E+   KG+P+FWLT  KN D+LS+ + E DE  LK LKDI  K+     P  F LEFYF+PN +F N VLTKTY M  E         D P +    G  I+W  GK +T
Sbjct:   49 VLAALQERLDDLVGTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHELERKYAALYQPLFDKRSDIINATYEPTEEECEWKVEEEDISGDLKEKAKLEEEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMLQEHDEPILKHLKDIKVKFSDAGQPMSFTLEFYFEPNEFFTNEVLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKGKNVT 269          
BLAST of CK937349 vs. ExPASy Swiss-Prot
Match: NP1L1_RAT (Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus GN=Nap1l1 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.732e-32
Identity = 84/222 (37.84%), Postives = 117/222 (52.70%), Query Frame = 3
Query:  252 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAAL*AKYQKLYQPMYTKRYEIVNGVVEGAPNEVA-MDQEEDKATEE-------------------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPGKCLT 824
            ++  L+ +L  L    +  +E L   V++RV  L+ +Q +  ++EAKF+EE   L  KY  LYQP++ KR+EI+N + E    E      EED+ +EE                   KG+P+FWLT  K ND+LS+ + E DE  LK LKDI  K+     P  F LEF+F+PN YF N VLTKTY M  E         D P +    G +I+W  GK +T
Sbjct:   48 ILAALQERLDGLVDTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEVSEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFK-NDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFILEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVT 268          
BLAST of CK937349 vs. ExPASy Swiss-Prot
Match: NPL1B_XENLA (Nucleosome assembly protein 1-like 1-B OS=Xenopus laevis GN=nap1l1-B PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.318e-31
Identity = 84/222 (37.84%), Postives = 117/222 (52.70%), Query Frame = 3
Query:  252 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAAL*AKYQKLYQPMYTKRYEIVNGVVEGAPNEV--AMDQEED---------KATEE---------KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNTVLTKTYHMIDE---------DEPILEKAIGTEIEWYPGKCLT 824
            ++  L+ +L +L G  +  +E L   V++RV  L+ +Q +  ++EAKF+EE   L  KY  LYQP + KR +I+N   E    E    +D+EED         K  EE         KG+P+FWLT  KN D+LS+ + E DE  LK LKDI  K+     P  F LEF+F+PN +F N +LTKTY M  E         D P +    G  I+W  GK +T
Sbjct:   49 VLAALQERLDDLVGTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHELERKYAALYQPFFEKRSDIINASYEPTEEECEWKVDEEEDIAEDLKEKAKLEEEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSEAGQPMNFMLEFHFEPNEFFTNELLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKGKNVT 270          
BLAST of CK937349 vs. ExPASy Swiss-Prot
Match: NP1L4_RAT (Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus GN=Nap1l4 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.792e-30
Identity = 83/225 (36.89%), Postives = 117/225 (52.00%), Query Frame = 3
Query:  252 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAAL*AKYQKLYQPMYTKRYEIVNGVVE--------------------GAPNEVAMDQEEDKATEE---KGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNTVLTKTYHMIDEDE---------PILEKAIGTEIEWYPGKCLT 824
            ++  L+ +L N++   S  +E L  AV++R+  L+++Q     +EAKF+EE   L  KY  LYQP++ KR E + G VE                       N+V + ++E  A EE   KG+P+FW T  +N D+LSE + E DE  LK L+DIK    D   P  F LEF+F+PN YF N VLTKTY M  E +         P +    G  I+W  GK +T
Sbjct:   37 VLAALQERLDNVSHTPSSYIETLPKAVKRRINALKQLQVRCAHIEAKFYEEVHDLERKYAALYQPLFDKRREFITGDVEPTDAESAWHSENEEDDKLAGDMKNKVVIAEKEAAAVEELNPKGIPEFWFTIFRNVDMLSELVQEYDEPILKHLQDIKVKFSDPGQPMSFVLEFHFEPNDYFTNPVLTKTYKMKSEPDKADPFSFEGPEIVDCDGCTIDWKKGKNVT 261          
The following BLAST results are available for this feature:
BLAST of CK937349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
NP1L1_MOUSE6.047e-3337.84Nucleosome assembly protein 1-like 1 OS=Mus muscul... [more]
NP1L1_PONAB1.347e-3237.84Nucleosome assembly protein 1-like 1 OS=Pongo abel... [more]
NP1L1_HUMAN1.347e-3237.84Nucleosome assembly protein 1-like 1 OS=Homo sapie... [more]
NP1L1_BOVIN1.347e-3237.84Nucleosome assembly protein 1-like 1 OS=Bos taurus... [more]
NP1L1_XENTR5.119e-3238.29Nucleosome assembly protein 1-like 1 OS=Xenopus tr... [more]
YGNB_SCHPO6.686e-3236.11Putative nucleosome assembly protein C2D10.11C OS=... [more]
NPL1A_XENLA8.732e-3238.46Nucleosome assembly protein 1-like 1-A OS=Xenopus ... [more]
NP1L1_RAT8.732e-3237.84Nucleosome assembly protein 1-like 1 OS=Rattus nor... [more]
NPL1B_XENLA3.318e-3137.84Nucleosome assembly protein 1-like 1-B OS=Xenopus ... [more]
NP1L4_RAT4.792e-3036.89Nucleosome assembly protein 1-like 4 OS=Rattus nor... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004511_A04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937349 ID=CK937349; Name=CK937349; organism=Citrus sinensis; type=EST; length=824bp
GGGGAGGGCGAGGGAGAGGATTTAAGCGAGGCCACGTTTTCTTCTGACGC
CTCTCTTAACTCATCAAAGTCGAAACTCGTTTCCCTTGTTTTTCACCAAT
TCCTTTTTGTTCGCCTAGGGTTTTAGCACCCTATCCCCTCGCTCTCTCTA
AAACGCCGTCGCTTCTTCCTCCGCCGACAATGAGCGCCGACAAAGATAAC
TTCAACGTTACAGATCTCCGCGCCTCTCTTGATGAAGGGGCTCGAGCTGA
CCTCGTGGGTGTTCTGAAGAATAAACTTCAGAACCTTGCTGGGCAGCACT
CTGATGTTCTCGAGAAACTGACTCCAGCAGTCAGGAAGCGTGTTGAGGTT
CTCAGAGAGATCCAGAGTGAACATGATGAATTGGAGGCAAAATTTTTTGA
GGAGAGAGCAGCACTGTAAGCCAAATATCAAAAATTGTATCAGCCTATGT
ACACCAAGAGATATGAGATTGTCAATGGTGTTGTTGAAGGGGCCCCAAAT
GAAGTTGCAATGGACCAGGAAGAGGATAAAGCCACTGAAGAGAAAGGAGT
GCCGGACTTCTGGCTTACTGCAATGAAAAATAATGATGTCCTATCTGAGG
AAATTACTGAGCGCGATGAAGGAGCTCTCAAGTTTCTCAAAGACATTAAG
TGGTTTAGGATTGATGATCCAAAGGGATTCAAGCTTGAATTCTACTTTGA
CCCCAATCCATACTTCAAGAACACTGTCTTGACAAAGACCTATCACATGA
TTGATGAAGATGAGCCTATTCTTGAGAAAGCTATAGGGACGGAGATTGAA
TGGTATCCAGGGAAATGCTTGACN
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