CK937344

Overview
NameCK937344
Unique NameCK937344
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length227
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937344 vs. ExPASy Swiss-Prot
Match: MPK3_ARATH (Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana GN=MPK3 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 4.288e-30
Identity = 59/75 (78.67%), Postives = 69/75 (92.00%), Query Frame = -1
Query:    3 IKLLQHFDHENVIAVKDVVPPPLRREFTDVSTAAELTDTDLYQIIRSNQSLSDEHCQYFLYQLLRGLXYIHSANV 227
            IKLL+H DHEN+IA++DVVPPPLRR+F+DV  + EL DTDL+QIIRSNQSLS+EHCQYFLYQLLRGL YIHSAN+
Sbjct:   86 IKLLRHLDHENIIAIRDVVPPPLRRQFSDVYISTELMDTDLHQIIRSNQSLSEEHCQYFLYQLLRGLKYIHSANI 160          
BLAST of CK937344 vs. ExPASy Swiss-Prot
Match: MPK6_ARATH (Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.353e-28
Identity = 55/75 (73.33%), Postives = 66/75 (88.00%), Query Frame = -1
Query:    3 IKLLQHFDHENVIAVKDVVPPPLRREFTDVSTAAELTDTDLYQIIRSNQSLSDEHCQYFLYQLLRGLXYIHSANV 227
            IKLL+H DHEN++A++D++PPPLR  F DV  A EL DTDL+QIIRSNQ+LS+EHCQYFLYQ+LRGL YIHSANV
Sbjct:  111 IKLLRHMDHENIVAIRDIIPPPLRNAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANV 185          
BLAST of CK937344 vs. ExPASy Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.941e-28
Identity = 54/75 (72.00%), Postives = 65/75 (86.67%), Query Frame = -1
Query:    3 IKLLQHFDHENVIAVKDVVPPPLRREFTDVSTAAELTDTDLYQIIRSNQSLSDEHCQYFLYQLLRGLXYIHSANV 227
            IKLL+H DHEN++A++D++PPP R  F DV  A EL DTDL+QIIRSNQ+LS+EHCQYFLYQ+LRGL YIHSANV
Sbjct:  115 IKLLRHMDHENIVAIRDIIPPPQRNSFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANV 189          
BLAST of CK937344 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.941e-28
Identity = 56/75 (74.67%), Postives = 65/75 (86.67%), Query Frame = -1
Query:    3 IKLLQHFDHENVIAVKDVVPPPLRREFTDVSTAAELTDTDLYQIIRSNQSLSDEHCQYFLYQLLRGLXYIHSANV 227
            IKLL+H DHENV+A++D+VPPP R  F DV  A EL DTDL+QIIRSNQ+LS+EHCQYFLYQ+LRGL YIHSANV
Sbjct:  103 IKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANV 177          
BLAST of CK937344 vs. ExPASy Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.525e-27
Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = -1
Query:    3 IKLLQHFDHENVIAVKDVVPPPLRREFTDVSTAAELTDTDLYQIIRSNQSLSDEHCQYFLYQLLRGLXYIHSANV 227
            IKLL+H DHEN++A++D++PPP R  F DV  A EL DTDL+QIIRSNQ LS+EHCQYFLYQ+LRGL YIHSANV
Sbjct:  108 IKLLRHMDHENIVAIRDIIPPPQREAFNDVYIAYELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANV 182          
BLAST of CK937344 vs. ExPASy Swiss-Prot
Match: MAPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.992e-27
Identity = 55/75 (73.33%), Postives = 65/75 (86.67%), Query Frame = -1
Query:    3 IKLLQHFDHENVIAVKDVVPPPLRREFTDVSTAAELTDTDLYQIIRSNQSLSDEHCQYFLYQLLRGLXYIHSANV 227
            IKL++H DHENV+A++D+VPPP R  F DV  A EL DTDL+QIIRSNQ+LS+EHCQYFLYQ+LRGL YIHSANV
Sbjct:  110 IKLVRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANV 184          
BLAST of CK937344 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSJ (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica GN=MPK5 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.886e-27
Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = -1
Query:    3 IKLLQHFDHENVIAVKDVVPPPLRREFTDVSTAAELTDTDLYQIIRSNQSLSDEHCQYFLYQLLRGLXYIHSANV 227
            IKLL+H DHEN+I ++DV+PPP+ + F DV  A EL DTDL+ IIRSNQ LS+EHCQYFLYQ+LRGL YIHSANV
Sbjct:   84 IKLLRHLDHENIIGIRDVIPPPIPQAFNDVYIATELMDTDLHHIIRSNQELSEEHCQYFLYQILRGLKYIHSANV 158          
BLAST of CK937344 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSI (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica GN=MPK5 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 9.886e-27
Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = -1
Query:    3 IKLLQHFDHENVIAVKDVVPPPLRREFTDVSTAAELTDTDLYQIIRSNQSLSDEHCQYFLYQLLRGLXYIHSANV 227
            IKLL+H DHEN+I ++DV+PPP+ + F DV  A EL DTDL+ IIRSNQ LS+EHCQYFLYQ+LRGL YIHSANV
Sbjct:   84 IKLLRHLDHENIIGIRDVIPPPIPQAFNDVYIATELMDTDLHHIIRSNQELSEEHCQYFLYQILRGLKYIHSANV 158          
BLAST of CK937344 vs. ExPASy Swiss-Prot
Match: MPK6_ORYSJ (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica GN=MPK6 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.686e-26
Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = -1
Query:    3 IKLLQHFDHENVIAVKDVVPPPLRREFTDVSTAAELTDTDLYQIIRSNQSLSDEHCQYFLYQLLRGLXYIHSANV 227
            IKLL+H DHEN+IA+KD++ PP R  F DV   +EL DTDL+QIIRSNQ L+D+HCQYFLYQLLRGL Y+HSANV
Sbjct:   91 IKLLRHMDHENIIAIKDIIRPPRRDNFNDVYIVSELMDTDLHQIIRSNQPLTDDHCQYFLYQLLRGLKYVHSANV 165          
BLAST of CK937344 vs. ExPASy Swiss-Prot
Match: NTF6_TOBAC (Mitogen-activated protein kinase homolog NTF6 OS=Nicotiana tabacum GN=NTF6 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.369e-26
Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = -1
Query:    3 IKLLQHFDHENVIAVKDVVPPPLRREFTDVSTAAELTDTDLYQIIRSNQSLSDEHCQYFLYQLLRGLXYIHSANV 227
            IKLL H DHEN+I +KD+V PP R EF DV    EL DTDL+QIIRS+Q+L+D+HCQYFLYQLLRGL Y+HSANV
Sbjct:   86 IKLLSHMDHENIIKIKDIVRPPDREEFNDVYIVYELMDTDLHQIIRSSQALTDDHCQYFLYQLLRGLKYVHSANV 160          
The following BLAST results are available for this feature:
BLAST of CK937344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
MPK3_ARATH4.288e-3078.67Mitogen-activated protein kinase 3 OS=Arabidopsis ... [more]
MPK6_ARATH2.353e-2873.33Mitogen-activated protein kinase 6 OS=Arabidopsis ... [more]
MPK1_ORYSJ8.941e-2872.00Mitogen-activated protein kinase 1 OS=Oryza sativa... [more]
MMK1_MEDSA8.941e-2874.67Mitogen-activated protein kinase homolog MMK1 OS=M... [more]
NTF4_TOBAC1.525e-2772.00Mitogen-activated protein kinase homolog NTF4 OS=N... [more]
MAPK_PEA1.992e-2773.33Mitogen-activated protein kinase homolog D5 OS=Pis... [more]
MPK5_ORYSJ9.886e-2770.67Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK5_ORYSI9.886e-2770.67Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK6_ORYSJ1.686e-2670.67Mitogen-activated protein kinase 6 OS=Oryza sativa... [more]
NTF6_TOBAC8.369e-2670.67Mitogen-activated protein kinase homolog NTF6 OS=N... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004511_B07 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937344 ID=CK937344; Name=CK937344; organism=Citrus sinensis; type=EST; length=227bp
ATAACATTTGCTGAATGGATATANNNGAGTCCTCGAAGAAGTTGATACAA
GAAATACTGGCAGTGCTCGTCGGATAAACTTTGATTTGAGCGAATAATTT
GGTAAAGGTCAGTGTCCGTGAGTTCCGCAGCAGTAGAGACGTCAGTGAAT
TCTCTTCGTAACGGTGGGGGAACCACATCTTTTACAGCTATCACATTTTC
ATGATCGAAATGTTGCAGAAGCTTAAT
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