CK937341

Overview
NameCK937341
Unique NameCK937341
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2)

HSP 1 Score: 286.96 bits (733), Expect = 7.711e-77
Identity = 148/199 (74.37%), Postives = 166/199 (83.42%), Query Frame = 3
Query:  111 PSSSQTSDSPA-ISASICSAGEAAGYHRKPAFDDDVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            PSSS + +  A +SAS C AG++A Y R   + DDVVIVAA+RT  CK+KRG FKDT  DDLLAPVL+A+IEKT LNPSEVGDIVVGTVLAPGS RA ECRMAAFYAGFPETV +RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N ++  G VNP V+ F QA++CLLPMG+TSENVAQRFGV+RQEQD
Sbjct:   17 PSSSSSHNYEASLSASACLAGDSAAYQRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQD 215          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.409e-70
Identity = 141/198 (71.21%), Postives = 157/198 (79.29%), Query Frame = 3
Query:  111 PSSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            PSSS  +   ++SAS C + ++A Y     + DDVVIVAA RTA CKAKRG FKDT  D+LLA VL+A+IEKT +NPSEVGDIVVGTVL PGS RA ECRMAAFYAGFPETVP+RTVNRQCSSGLQAVADVA AIKAG YDIGI AGLESMT N     G VNP V+ F QA +CLLPMGITSENVA RF V+R+EQD
Sbjct:   17 PSSSSDA---SLSASACLSKDSAAYQ----YGDDVVIVAAQRTALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPGSQRASECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPRGWKGSVNPNVKKFEQAHNCLLPMGITSENVAHRFNVSREEQD 207          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: THIK5_ARATH (3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 1.116e-67
Identity = 132/200 (66.00%), Postives = 161/200 (80.50%), Query Frame = 3
Query:  114 SSSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVG--QVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQDL 707
            S+S     P++ + +    E +      AF DD+VIVAAYRTA CKA+RGGFKDTL DDLLA VLKAV+E+T L+PSEVGDIVVGTV+APGS RAMECR+AA++AGFP++VP+RTVNRQCSSGLQAVADVA +I+AG YDIGI AG+ESM+ + I   G    NP+ + F +ARDCLLPMGITSENVA+RFGVTR+EQD+
Sbjct:   21 SNSSLKHEPSLLSPVNCVSEVSPM---AAFGDDIVIVAAYRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPGSQRAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMSTDHIPGGGFHGSNPRAQDFPKARDCLLPMGITSENVAERFGVTREEQDM 217          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 9.194e-46
Identity = 101/196 (51.53%), Postives = 134/196 (68.37%), Query Frame = 3
Query:  117 SSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            + ++  S A+ A+ CSAG         A   DVV+V   RT   +A RGGFKDT  D+LL+ VL AV++  +L P  +GDI VG VL PG+  AM  R+A F +G PETVPL  VNRQCSSGLQAVA++A  I+ G YDIG+A G+ESMT++     G ++ ++    +ARDCL+PMGITSENVA+RFG++RQ+QD
Sbjct:   12 AGRSESSSALQAAPCSAGFPQ------ASASDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGAGAAM-ARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLSERGNPGNISSRLLENEKARDCLIPMGITSENVAERFGISRQKQD 200          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: THIKB_MOUSE (3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.048e-45
Identity = 101/196 (51.53%), Postives = 133/196 (67.86%), Query Frame = 3
Query:  117 SSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            + +   S A+ A+ CSAG         A   DVV+V   RT   +A RG FKDT  D+LL+ VL AV++  +L P ++GDI VG VL PG+   M  R+A F +G PETVPL TVNRQCSSGLQAVA++A  I+ G YDIG+A G+ESMT++     G ++ ++    +ARDCL+PMGITSENVA+RFGV+RQ+QD
Sbjct:   12 AGRPESSSALQAAPCSAGFLQ------ASASDVVVVHGRRTPIGRASRGCFKDTTPDELLSAVLTAVLQDVKLKPEQLGDISVGNVLQPGAGAIM-ARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLSQRGNHGNISSRLLENEKARDCLIPMGITSENVAERFGVSRQKQD 200          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.494e-45
Identity = 100/197 (50.76%), Postives = 135/197 (68.53%), Query Frame = 3
Query:  117 SSQTSDSPAISASICSAGEAAGYHRKP-AFDDDVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            + +   S A+ A+ CSA       R P A   DVV+V   RT   +A RGGFK+T  D+LL+ VL AV++  RL P ++GDI VG VL PG+   M  R+A F +G PETVPL TVNRQCSSGLQAVA++A  I+ G YDIG+A G+ESM+++ +   G ++ ++    +ARDCL PMG+TSENVA+RFG++RQ+QD
Sbjct:   12 AGRPESSSALQAAPCSA-------RFPQASASDVVVVHGRRTPIGRASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAGAVM-ARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSGMGNPGNISSRLLESEKARDCLTPMGMTSENVAERFGISRQKQD 200          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.863e-44
Identity = 91/165 (55.15%), Postives = 119/165 (72.12%), Query Frame = 3
Query:  210 DVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            DVV+V   RTA C+A RGGFKDT  D+LL+ V+ AV++   L P ++GDI VG VL PG+   M  R+A F +  PETVPL TVNRQCSSGLQAVA +A  I+ G YDIG+A G+ESM++      G +  ++    +ARDCL+PMGITSENVA+RFG++R++QD
Sbjct:   37 DVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIM-ARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISREKQD 200          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 6.589e-44
Identity = 98/196 (50.00%), Postives = 132/196 (67.35%), Query Frame = 3
Query:  117 SSQTSDSPAISASICSAGEAAGYHRKPAFDDDVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVNSISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            + +   S A+ A+ CSA          A   DVV+V   RT   +A RGGFKDT  D+LL+ VL AV++  +L P  +GDI VG VL PG+   M  R+A F +G PETVPL  VNRQCSSGLQAVA++A  I+ G YDIG+A G+ESM++++    G ++ ++    +ARDCL+PMGITSENVA+RFG++RQ+QD
Sbjct:   12 AGRPESSSALQAAPCSATFPQ------ASASDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLEPGAGAVM-ARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLSNRGNPGNISSRLLESDKARDCLIPMGITSENVAERFGISRQKQD 200          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: THIK_YARLI (3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica GN=POT1 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.801e-37
Identity = 84/167 (50.30%), Postives = 115/167 (68.86%), Query Frame = 3
Query:  207 DDVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVLAPGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN-SISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            DDVVI AAYRTA+ K  +G FKDT + +LLA +L+ ++++++++P  +GD+V G VLA G+  A E R A   AG PETVP   +NRQCSSGL AV DVA  I+AG  DIGI  G+ESM+     + V   + K +   +A+ CL+PMGITSENVA ++ V+R+ QD
Sbjct:   28 DDVVITAAYRTAHTKGGKGLFKDTSSSELLASLLEGLVKESKIDPKLIGDVVCGNVLAAGAG-ATEHRAACLVAGIPETVPFVALNRQCSSGLMAVNDVANKIRAGQIDIGIGCGVESMSNQYGPNSVTPFSNKFQNNEEAKKCLIPMGITSENVAAKYNVSRKAQD 193          
BLAST of CK937341 vs. ExPASy Swiss-Prot
Match: THIKB_CANTR (3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 76/170 (44.71%), Postives = 105/170 (61.76%), Query Frame = 3
Query:  207 DDVVIVAAYRTANCKAKRGGFKDTLADDLLAPVLKAVIEKTRLNPSEVGDIVVGTVL--APGSTRAMECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVATAIKAGLYDIGIAAGLESMTVN--SISVVGQVNPKVEIFTQARDCLLPMGITSENVAQRFGVTRQEQD 704
            DDVVIVAAYRTA  K  +G F++  ++ +L   LK  I+KT ++PS + D+ +G VL  A G+T   E R A   AG P T     VNR CSSGL A++D+A  IK G  + G+A G ESM+ N     V  +++P +    Q   CL+PMGIT+ENVA +F ++R+ QD
Sbjct:   25 DDVVIVAAYRTAIGKGFKGSFRNVHSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAAGAT---EHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMSTNYRDPRVAPRIDPHLADDAQMEKCLIPMGITNENVANQFNISRERQD 191          
The following BLAST results are available for this feature:
BLAST of CK937341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
THIK2_ARATH7.711e-7774.373-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidop... [more]
THIK1_ARATH1.409e-7071.213-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidop... [more]
THIK5_ARATH1.116e-6766.003-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidop... [more]
THIKB_RAT9.194e-4651.533-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus n... [more]
THIKB_MOUSE2.048e-4551.533-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musc... [more]
THIKA_MOUSE3.494e-4550.763-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musc... [more]
THIK_HUMAN3.863e-4455.153-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapie... [more]
THIKA_RAT6.589e-4450.003-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus n... [more]
THIK_YARLI7.801e-3750.303-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia l... [more]
THIKB_CANTR1.425e-3044.713-ketoacyl-CoA thiolase B, peroxisomal OS=Candida ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004511_B03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937341 ID=CK937341; Name=CK937341; organism=Citrus sinensis; type=EST; length=757bp
CGGCCGGGGGTTCTCGNNNCCTTTGAACTCTAAAGCTCTCNNNTGAAACC
TGAGAGTGAGAGAGGGGGAAAGCTCTTCACAGACAGAGAATTCTGCTTCA
ACATCTTCGACCTTCTTCTTCCCAAACCAGTGACTCGCCGGCTATTTCTG
CGTCGATTTGTTCGGCTGGTGAGGCTGCAGGGTACCATAGGAAGCCTGCT
TTTGATGATGATGTCGTAATTGTGGCTGCATACCGAACTGCAAATTGCAA
GGCGAAACGTGGAGGCTTCAAGGATACTCTTGCCGATGATCTGCTTGCAC
CTGTTCTGAAGGCAGTGATAGAGAAAACGAGGTTGAATCCCAGCGAAGTA
GGGGATATAGTTGTTGGTACAGTCTTGGCACCTGGCTCAACAAGAGCCAT
GGAGTGTAGGATGGCAGCGTTCTATGCTGGTTTCCCTGAAACGGTGCCCC
TCAGAACTGTCAACAGGCAGTGTTCATCTGGCTTGCAGGCGGTTGCTGAT
GTTGCAACTGCTATAAAAGCTGGATTGTATGACATTGGTATTGCTGCTGG
ATTGGAAAGCATGACTGTGAATTCTATTAGCGTTGTTGGCCAAGTTAACC
CCAAAGTGGAGATCTTTACTCAAGCTCGGGACTGTCTTCTTCCTATGGGT
ATCACTTCTGAAAATGTTGCACAAAGATTTGGTGTGACACGACAAGAGCA
AGACCTGGCTGCCATTGAATCTCATAGGCGTGCTGCTGCTGCAACTGCAT
CTGGCAA
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