CK937340
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937340 vs. ExPASy Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 7.029e-38 Identity = 71/123 (57.72%), Postives = 92/123 (74.80%), Query Frame = 2 Query: 2 LLLVAXSPNVTVASTLFSAFYTTYSLFAGFVIPQPQIPKWWIWLYYLSPTSWTLEG*LTSQYGDIDKEIMVFIENKTIASFLEEYFGFHHDHXXXXXXXXXXXXXXXXSLFAFFVGRLNFQQR 370 ++LV+ +P+ VA+ L S+FYT ++LFAGF++P+ QIPKWWIW YYL+PTSWTL G LTSQYGDI+KEI VF E KT+A+FL +YFGFHH+ SLFAFF+G+LNFQ+R Sbjct: 1325 MMLVSMTPSFPVAAILQSSFYTMFNLFAGFLMPKAQIPKWWIWFYYLTPTSWTLNGMLTSQYGDIEKEITVFQEKKTVAAFLGDYFGFHHNQLPIVAFVLIAYPLVFASLFAFFIGKLNFQRR 1447
BLAST of CK937340 vs. ExPASy Swiss-Prot
Match: AB43G_ARATH (ABC transporter G family member 43 OS=Arabidopsis thaliana GN=ABCG43 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.466e-35 Identity = 66/123 (53.66%), Postives = 89/123 (72.36%), Query Frame = 2 Query: 2 LLLVAXSPNVTVASTLFSAFYTTYSLFAGFVIPQPQIPKWWIWLYYLSPTSWTLEG*LTSQYGDIDKEIMVFIENKTIASFLEEYFGFHHDHXXXXXXXXXXXXXXXXSLFAFFVGRLNFQQR 370 +LLV +PNV +A TL S+FY +LFAG+V+P+P IP+WWIW+YYLSPTSW L G LTSQYGD++KEI+ F E K +++FLE+YFG+ +D SLFAFF+G+LNFQ++ Sbjct: 1268 MLLVVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKPNIPRWWIWMYYLSPTSWVLNGLLTSQYGDMEKEILAFGEKKKVSAFLEDYFGYRYDSLALVAVVLIAFPILLASLFAFFIGKLNFQKK 1390
BLAST of CK937340 vs. ExPASy Swiss-Prot
Match: AB42G_ARATH (ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.914e-35 Identity = 66/123 (53.66%), Postives = 88/123 (71.54%), Query Frame = 2 Query: 2 LLLVAXSPNVTVASTLFSAFYTTYSLFAGFVIPQPQIPKWWIWLYYLSPTSWTLEG*LTSQYGDIDKEIMVFIENKTIASFLEEYFGFHHDHXXXXXXXXXXXXXXXXSLFAFFVGRLNFQQR 370 +LLV +PNV +A TL S+FY +LFAG+V+P+P IP+WWIW+YYLSPTSW L G LTSQYGD++KEI+ F E K ++ FLE+YFG+ +D SLFAFF+G+LNFQ++ Sbjct: 1270 MLLVVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKPNIPRWWIWMYYLSPTSWVLNGLLTSQYGDMEKEILAFGEKKKVSDFLEDYFGYRYDSLALVAVVLIAFPILLASLFAFFIGKLNFQKK 1392
BLAST of CK937340 vs. ExPASy Swiss-Prot
Match: AB41G_ARATH (ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.265e-35 Identity = 66/123 (53.66%), Postives = 91/123 (73.98%), Query Frame = 2 Query: 2 LLLVAXSPNVTVASTLFSAFYTTYSLFAGFVIPQPQIPKWWIWLYYLSPTSWTLEG*LTSQYGDIDKEIMVFIENKTIASFLEEYFGFHHDHXXXXXXXXXXXXXXXXSLFAFFVGRLNFQQR 370 +L+VA +PN+ +A TL S F++ +LFAGFV+P+ +IPKWWIW+YYLSPTSW LEG L+SQYGD++KEI VF E K++++FLE+YFG+ HD SLFAFF+ +LNFQ++ Sbjct: 1275 MLMVALTPNIHMALTLRSTFFSMVNLFAGFVMPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYGDVEKEITVFGEKKSVSAFLEDYFGYKHDSLAVVAFVLIAFPIIVASLFAFFMSKLNFQKK 1397
BLAST of CK937340 vs. ExPASy Swiss-Prot
Match: AB33G_ARATH (ABC transporter G family member 33 OS=Arabidopsis thaliana GN=ABCG33 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 5.569e-35 Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 2 Query: 2 LLLVAXSPNVTVASTLFSAFYTTYSLFAGFVIPQPQIPKWWIWLYYLSPTSWTLEG*LTSQYGDIDKEIMVFIENKTIASFLEEYFGFHHDHXXXXXXXXXXXXXXXXSLFAFFVGRLNFQQR 370 + L++ +PN VA+ L S F+TT+++FAGF+IP+PQIPKWW+W YY++PTSWTL +SQYGDI ++I F E KT+ASFLE+YFGFHHD +++AFFV +LNFQ+R Sbjct: 1291 MFLISITPNFMVAAILQSLFFTTFNIFAGFLIPKPQIPKWWVWFYYITPTSWTLNLFFSSQYGDIHQKINAFGETKTVASFLEDYFGFHHDRLMITAIILIAFPIALATMYAFFVAKLNFQKR 1413
BLAST of CK937340 vs. ExPASy Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 7.274e-35 Identity = 67/123 (54.47%), Postives = 88/123 (71.54%), Query Frame = 2 Query: 2 LLLVAXSPNVTVASTLFSAFYTTYSLFAGFVIPQPQIPKWWIWLYYLSPTSWTLEG*LTSQYGDIDKEIMVFIENKTIASFLEEYFGFHHDHXXXXXXXXXXXXXXXXSLFAFFVGRLNFQQR 370 + LV+ +PN VA+ L S FY ++LF+GF+IPQ Q+P WWIWLYYL+PTSWTL G ++SQYGDI +EI VF ++ T+A FL++YFGFHHD S+FAFFVG+LNFQ+R Sbjct: 1328 MFLVSITPNFMVAAILQSLFYVGFNLFSGFLIPQTQVPGWWIWLYYLTPTSWTLNGFISSQYGDIHEEINVFGQSTTVARFLKDYFGFHHDLLAVTAVVQIAFPIALASMFAFFVGKLNFQRR 1450
BLAST of CK937340 vs. ExPASy Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 7.274e-35 Identity = 65/123 (52.85%), Postives = 92/123 (74.80%), Query Frame = 2 Query: 2 LLLVAXSPNVTVASTLFSAFYTTYSLFAGFVIPQPQIPKWWIWLYYLSPTSWTLEG*LTSQYGDIDKEIMVFIENKTIASFLEEYFGFHHDHXXXXXXXXXXXXXXXXSLFAFFVGRLNFQQR 370 +L+VA +PN+ +A TL S+F++ +LFAGFVIP+ +IPKWWIW+YYLSPTSW LEG L+SQYGD+DKEI+VF E K +++FLE+YFG+ H+ +LFAFF+ +L+FQ++ Sbjct: 1278 MLMVALTPNIHMAVTLRSSFFSMLNLFAGFVIPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYGDVDKEILVFGEKKRVSAFLEDYFGYKHESLAVVAFVLIAYPIIVATLFAFFMSKLSFQKK 1400
BLAST of CK937340 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.744e-23 Identity = 50/124 (40.32%), Postives = 77/124 (62.10%), Query Frame = 2 Query: 2 LLLVAXSPNVTVASTLFSAFYTTYSLFAGFVIPQPQIPKWWIWLYYLSPTSWTLEG*LTSQYGDIDKEIMV-FIENKTIASFLEEYFGFHHDHXXXXXXXXXXXXXXXXSLFAFFVGRLNFQQR 370 ++ V+ SPN+ VAS L +AFYT ++LF+GF IP+P+IPKWW+W Y+L P +WT+ G + SQYGD++ I V ++ + F+++YFG+ D +A+ + LNFQQR Sbjct: 1386 MMNVSVSPNLQVASILGAAFYTLFNLFSGFFIPRPKIPKWWVWYYWLCPVAWTVYGLIVSQYGDVEDFITVPGQSDQQVRPFIKDYFGYDPDFMGVVAAVLAGFTVFFAFTYAYSIRTLNFQQR 1509
BLAST of CK937340 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.744e-23 Identity = 49/125 (39.20%), Postives = 74/125 (59.20%), Query Frame = 2 Query: 2 LLLVAXSPNVTVASTLFSAFYTTYSLFAGFVIPQPQIPKWWIWLYYLSPTSWTLEG*LTSQYGDIDKEIMVF--IENKTIASFLEEYFGFHHDHXXXXXXXXXXXXXXXXSLFAFFVGRLNFQQR 370 ++ V+ +PN VAS SAFY ++LF+GF IP+P+IPKWWIW Y++ P +WT+ G + SQYGD++ I V + T+ ++E+++GF D +FAF + LNFQ R Sbjct: 1345 MMTVSLTPNQQVASIFASAFYGIFNLFSGFFIPRPKIPKWWIWYYWICPVAWTVYGLIVSQYGDVETRIQVLGGAPDLTVKQYIEDHYGFQSDFMGPVAAVLIAFTVFFAFIFAFCIRTLNFQTR 1469
BLAST of CK937340 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 6.387e-23 Identity = 50/125 (40.00%), Postives = 74/125 (59.20%), Query Frame = 2 Query: 2 LLLVAXSPNVTVASTLFSAFYTTYSLFAGFVIPQPQIPKWWIWLYYLSPTSWTLEG*LTSQYGDIDKEIMV--FIENKTIASFLEEYFGFHHDHXXXXXXXXXXXXXXXXSLFAFFVGRLNFQQR 370 ++ VA +PN VA+ AFY ++LF+GFVIP+P+IPKWWIW Y++ P +WT+ G + SQYGD++ I V + TI ++E ++G+ D +FAF + LNFQQR Sbjct: 1292 MMTVALTPNQQVAAVFAGAFYGLFNLFSGFVIPRPRIPKWWIWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGMANDPTIKWYIENHYGYDADFMIPIATVLVGFTLFFAFMFAFGIRTLNFQQR 1416 The following BLAST results are available for this feature:
BLAST of CK937340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937340 ID=CK937340; Name=CK937340; organism=Citrus sinensis; type=EST; length=508bpback to top |