CK937338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937338 vs. ExPASy Swiss-Prot
Match: RS272_ARATH (40S ribosomal protein S27-2 OS=Arabidopsis thaliana GN=RPS27B PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.416e-35 Identity = 69/85 (81.18%), Postives = 73/85 (85.88%), Query Frame = 2 Query: 71 VLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD 325 VLQNDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ++LCQPTGG+A+LTEGCSFRRKGD Sbjct: 2 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTILCQPTGGKAKLTEGCSFRRKGD 86
BLAST of CK937338 vs. ExPASy Swiss-Prot
Match: RS27_HORVU (40S ribosomal protein S27 OS=Hordeum vulgare GN=RPS27 PE=3 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 2.044e-34 Identity = 69/85 (81.18%), Postives = 71/85 (83.53%), Query Frame = 2 Query: 71 VLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD 325 VLQNDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC CQ+VLCQPTGG+ARLTEGCSFRRKGD Sbjct: 2 VLQNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRKGD 86
BLAST of CK937338 vs. ExPASy Swiss-Prot
Match: RS271_ARATH (40S ribosomal protein S27-1 OS=Arabidopsis thaliana GN=RPS27A PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.465e-32 Identity = 64/83 (77.11%), Postives = 70/83 (84.34%), Query Frame = 2 Query: 71 VLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 319 VLQNDIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CGNCQ++LC PTGG+A+LTEGCSFR+K Sbjct: 2 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGNCQTLLCTPTGGKAKLTEGCSFRKK 84
BLAST of CK937338 vs. ExPASy Swiss-Prot
Match: RS273_ARATH (40S ribosomal protein S27-3 OS=Arabidopsis thaliana GN=RPS27D PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 1.913e-32 Identity = 65/83 (78.31%), Postives = 69/83 (83.13%), Query Frame = 2 Query: 71 VLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 319 VLQNDIDLL+PP VQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ+VLCQPTGG+ARL EGCSFR+K Sbjct: 2 VLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGKARLQEGCSFRKK 84
BLAST of CK937338 vs. ExPASy Swiss-Prot
Match: RS27_CHLRE (40S ribosomal protein S27 OS=Chlamydomonas reinhardtii GN=RPS27 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30 Identity = 63/85 (74.12%), Postives = 66/85 (77.65%), Query Frame = 2 Query: 71 VLQNDIDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRKGD 325 VL +DIDLLNPPA VQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CG+C SVLC PTG RLTEGCSFRRK D Sbjct: 2 VLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGSCSSVLCTPTGWPRRLTEGCSFRRKSD 86
BLAST of CK937338 vs. ExPASy Swiss-Prot
Match: RS27_SCHPO (40S ribosomal protein S27 OS=Schizosaccharomyces pombe GN=rps27 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.564e-26 Identity = 54/78 (69.23%), Postives = 59/78 (75.64%), Query Frame = 2 Query: 86 IDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 319 +DLLNP VQ P SFFMDVKC GCFNITTVFSH+QTVV+CG+C SVLCQPTGG+ARL EGCSFRRK Sbjct: 5 VDLLNPSHESEMRKHKLKQLVQGPRSFFMDVKCPGCFNITTVFSHAQTVVICGSCASVLCQPTGGKARLMEGCSFRRK 82
BLAST of CK937338 vs. ExPASy Swiss-Prot
Match: RS27_NEUCR (40S ribosomal protein S27 OS=Neurospora crassa GN=rps-27 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.271e-24 Identity = 51/78 (65.38%), Postives = 57/78 (73.08%), Query Frame = 2 Query: 86 IDLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 319 +DLLNP V +P SFFMDVKC GCF ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 5 VDLLNPSPASEARKHKLKTLVPAPRSFFMDVKCPGCFTITTVFSHAQTVVICQGCTTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CK937338 vs. ExPASy Swiss-Prot
Match: RS27_XENLA (40S ribosomal protein S27 OS=Xenopus laevis GN=rps27 PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 4.272e-24 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 89 DLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 319 DLL+P VQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPTPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CK937338 vs. ExPASy Swiss-Prot
Match: RS27_RAT (40S ribosomal protein S27 OS=Rattus norvegicus GN=Rps27 PE=2 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 4.272e-24 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 89 DLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 319 DLL+P VQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CK937338 vs. ExPASy Swiss-Prot
Match: RS27_MOUSE (40S ribosomal protein S27 OS=Mus musculus GN=Rps27 PE=1 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 4.272e-24 Identity = 51/77 (66.23%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 89 DLLNPPAXXXXXXXXXXXXVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRARLTEGCSFRRK 319 DLL+P VQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82 The following BLAST results are available for this feature:
BLAST of CK937338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937338 ID=CK937338; Name=CK937338; organism=Citrus sinensis; type=EST; length=559bpback to top |