CK937337

Overview
NameCK937337
Unique NameCK937337
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK937337 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.589e-30
Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 1 
Query:   58 MLEKLWDDVVAGPQPDRGLGRLRKITTTPLAVKEGGEAESSSGKFQRSLSMPASXXXXXXXXXXXXXLSARKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVCDWLYSGETRSKHH 420
            +L+KLWDD+VAGPQP+RGLG LRK+   PL +K+ GE+          ++MP +             +SARKDNVWRSVFHPGSNL+++ +G +VFD P  PNSPTV DW+YSGETRSKHH
Sbjct:    3 LLDKLWDDIVAGPQPERGLGMLRKVPQ-PLNLKDEGESSK--------ITMPTTPTTPVTPTTP---ISARKDNVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDWMYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of CK937337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN5.589e-3055.37Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004511_C09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937337 ID=CK937337; Name=CK937337; organism=Citrus sinensis; type=EST; length=771bp
GGGACTGAAGAAGAGGTTAAAGATTTAGAAACTAGCAGCTAAATTGTAAA
TTTAAAGATGCTAGAGAAGCTTTGGGACGATGTTGTGGCAGGGCCTCAGC
CTGATCGTGGCCTTGGCAGGCTGAGGAAAATCACCACAACACCCTTAGCA
GTCAAAGAGGGTGGTGAGGCGGAGTCGTCGTCGGGCAAGTTCCAGAGGTC
TCTGTCAATGCCAGCGAGTCCAGGGGCACCGACGACGCCAGTGACGCCGA
CGACGCCGCTGTCGGCGCGTAAGGACAACGTGTGGAGGAGCGTGTTTCAC
CCCGGTAGCAACCTTGCTACTAGGGGTATCGGTGCAGAGGTCTTTGACAA
GCCCACACATCCTAACTCTCCCACTGTTTGTGACTGGCTTTACAGTGGGG
AGACTAGGAGCAAGCATCATCACTGAGTGGATGATACGCTCCAGCGATGT
AAATGAATGTGATGGGTCACCAACTCACCGGATGAGTTGCCTGTAGTCTG
TAGATAGTGTCGTTTCGTTTTGGATTTCGCAACGTGTCCTTGTCGTTTTG
TTAATGCTATTTGTATTACGTGTCCTTCCTATCTAAAGTCTGGTTTTAAA
ATGCTGCTGACTAAAAGTAAACTAAAGACTGTGATGTTTTTATATCATAT
AATTTAATAATTGTATGTGATGTGAGGATTGCTAAGCTGTGGGCGGAGAT
GAAAGGTTGCTGGTTTTTGGGTTTAGGACATGTTTTTGATTGTCATTTTG
TAAGAGCCAAGATCATCCCTT
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