CK937322

Overview
NameCK937322
Unique NameCK937322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937322 vs. ExPASy Swiss-Prot
Match: URIC2_CANLI (Uricase-2 isozyme 2 OS=Canavalia lineata PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 2.800e-46
Identity = 95/138 (68.84%), Postives = 105/138 (76.09%), Query Frame = 1
Query:    1 VWRSKEGRHFMVEWNVSISLLXXXXXXXXXXXXXXXXXXXXXKNTVYAKAKERKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWERVSVDGQLHEHGFKLGSERHTTEVTVQKSGALQMTSGIEGLALLKTTK 414
            VW++K+G +F+VEW V ISLL                     KNTVYAKAKE  E LSVE+FAILLAKHF SFY+QVT+AIV IVEKPWERVSVDGQ HEHGFKLGSERHT E  VQKSGALQ+TSGIEGL+LLKTTK
Sbjct:   25 VWKTKKGGYFIVEWRVGISLLSDCVNSYVRDDNSDIVATDTMKNTVYAKAKECSEILSVEDFAILLAKHFISFYKQVTAAIVNIVEKPWERVSVDGQPHEHGFKLGSERHTAEAIVQKSGALQLTSGIEGLSLLKTTK 162          
BLAST of CK937322 vs. ExPASy Swiss-Prot
Match: URIC1_CANLI (Uricase-2 isozyme 1 OS=Canavalia lineata PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.815e-45
Identity = 94/138 (68.12%), Postives = 104/138 (75.36%), Query Frame = 1
Query:    1 VWRSKEGRHFMVEWNVSISLLXXXXXXXXXXXXXXXXXXXXXKNTVYAKAKERKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWERVSVDGQLHEHGFKLGSERHTTEVTVQKSGALQMTSGIEGLALLKTTK 414
            VW++K+G +F+VEW V  SLL                     KNTVYAKAKE  E LSVE+FAILLAKHF SFY+QVT+AIV IVEKPWERVSVDGQ HEHGFKLGSERHT E  VQKSGALQ+TSGIEGL+LLKTTK
Sbjct:   25 VWKTKQGWYFIVEWRVGNSLLSDCVNSYVRDDNSDIVATDTMKNTVYAKAKECSEILSVEDFAILLAKHFISFYKQVTAAIVNIVEKPWERVSVDGQPHEHGFKLGSERHTAEAIVQKSGALQLTSGIEGLSLLKTTK 162          
BLAST of CK937322 vs. ExPASy Swiss-Prot
Match: URIC1_SOYBN (Uricase-2 isozyme 1 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 5.839e-44
Identity = 87/138 (63.04%), Postives = 104/138 (75.36%), Query Frame = 1
Query:    1 VWRSKEGRHFMVEWNVSISLLXXXXXXXXXXXXXXXXXXXXXKNTVYAKAKERKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWERVSVDGQLHEHGFKLGSERHTTEVTVQKSGALQMTSGIEGLALLKTTK 414
            VW++++G+HF+VEW V I+L                      KNTVYAKAKE  + LS EEFAILLAKHF SFY++VT AIV IVEKPWERV+VDGQ HEHGFKLGSE+HTTE  VQKSG+LQ+TSGIEGL++LKTT+
Sbjct:   26 VWKTRQGQHFIVEWRVGITLFSDCVNSYLRDDNSDIVATDTMKNTVYAKAKECSDILSAEEFAILLAKHFVSFYQKVTGAIVNIVEKPWERVTVDGQPHEHGFKLGSEKHTTEAIVQKSGSLQLTSGIEGLSVLKTTQ 163          
BLAST of CK937322 vs. ExPASy Swiss-Prot
Match: URIC2_SOYBN (Uricase-2 isozyme 2 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.219e-43
Identity = 86/138 (62.32%), Postives = 103/138 (74.64%), Query Frame = 1
Query:    1 VWRSKEGRHFMVEWNVSISLLXXXXXXXXXXXXXXXXXXXXXKNTVYAKAKERKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWERVSVDGQLHEHGFKLGSERHTTEVTVQKSGALQMTSGIEGLALLKTTK 414
            VW++++G+HF+VEW V I+L                      KNTVYAKAKE  + LS E+FAILLAKHF SFY++VT AIV IVEKPWERV VDGQ HEHGFKLGSE+HTTE  VQKSG+LQ+TSGIEGL++LKTT+
Sbjct:   26 VWKTRQGQHFVVEWRVGITLFSDCVNSYLRDDNSDIVATDTMKNTVYAKAKECSDILSAEDFAILLAKHFVSFYKKVTGAIVNIVEKPWERVIVDGQPHEHGFKLGSEKHTTEAIVQKSGSLQLTSGIEGLSVLKTTQ 163          
BLAST of CK937322 vs. ExPASy Swiss-Prot
Match: URIC_PHAVU (Uricase-2 OS=Phaseolus vulgaris GN=URIII PE=1 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 2.898e-43
Identity = 87/138 (63.04%), Postives = 102/138 (73.91%), Query Frame = 1
Query:    1 VWRSKEGRHFMVEWNVSISLLXXXXXXXXXXXXXXXXXXXXXKNTVYAKAKERKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWERVSVDGQLHEHGFKLGSERHTTEVTVQKSGALQMTSGIEGLALLKTTK 414
            VWR+ +GRHF+VEW V I+L                      KNTVYAKAKE  + LSVE+FAILLAKHF SFY++VT AIV IVEKPWERV VDGQ H+HGF LGSE+HTTE  VQKSG+LQ+TSGIEGL++LKTT+
Sbjct:   25 VWRTPQGRHFVVEWRVGITLFSDCVNSYLRDDNSDIVATDTMKNTVYAKAKECSDILSVEDFAILLAKHFVSFYKKVTGAIVNIVEKPWERVIVDGQPHQHGFTLGSEKHTTEAIVQKSGSLQLTSGIEGLSVLKTTQ 162          
BLAST of CK937322 vs. ExPASy Swiss-Prot
Match: URIC_ARATH (Uricase OS=Arabidopsis thaliana GN=At2g26230 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 5.115e-40
Identity = 86/139 (61.87%), Postives = 98/139 (70.50%), Query Frame = 1
Query:    1 VWR-SKEGRHFMVEWNVSISLLXXXXXXXXXXXXXXXXXXXXXKNTVYAKAKERKEQLSVEEFAILLAKHFTSFYRQVTSAIVRIVEKPWERVSVDGQLHEHGFKLGSERHTTEVTVQKSGALQMTSGIEGLALLKTTK 414
            VWR + +G H  VEWNVSISLL                     KNTVY KAKE  ++LSVEEFAIL+ KHF SFY QV +AIV I+EKPWERVS+DG+ H HGFKLGSE HTTE  V+KSGAL +TSGI GLALLKTT+
Sbjct:   24 VWRHAHDGSHHFVEWNVSISLLSHCLSSYRLDDNSDIVATDTIKNTVYVKAKECGDRLSVEEFAILIGKHFCSFYPQVFTAIVNIIEKPWERVSIDGKPHLHGFKLGSENHTTEARVEKSGALNLTSGIGGLALLKTTQ 162          
The following BLAST results are available for this feature:
BLAST of CK937322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
URIC2_CANLI2.800e-4668.84Uricase-2 isozyme 2 OS=Canavalia lineata PE=2 SV=1[more]
URIC1_CANLI1.815e-4568.12Uricase-2 isozyme 1 OS=Canavalia lineata PE=2 SV=1[more]
URIC1_SOYBN5.839e-4463.04Uricase-2 isozyme 1 OS=Glycine max PE=1 SV=2[more]
URIC2_SOYBN2.219e-4362.32Uricase-2 isozyme 2 OS=Glycine max PE=1 SV=1[more]
URIC_PHAVU2.898e-4363.04Uricase-2 OS=Phaseolus vulgaris GN=URIII PE=1 SV=2[more]
URIC_ARATH5.115e-4061.87Uricase OS=Arabidopsis thaliana GN=At2g26230 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004511_D07 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937322 ID=CK937322; Name=CK937322; organism=Citrus sinensis; type=EST; length=541bp
GTTTGGCGAAGCAAAGAAGGCCGCCATTTTATGGTCGAATGGAACGTCAG
CATCAGCTTGCTCTCCGATTCCATCATCGCCTACGTTGACGACGATANNN
NCGATATCGTCGCCACCGATACCATAAAAAATACTGTTTACGCTAAAGCT
AAGGAACGTAAAGAGCAACTTTCAGTCGAGGAATTTGCTATTTTACTCGC
CAAGCACTTTACGTCCTTTTATCGCCAGGTTACTAGTGCCATAGTGAGGA
TAGTGGAAAAGCCATGGGAACGTGTATCCGTGGATGGGCAACTGCATGAG
CATGGTTTCAAACTTGGATCTGAGAGGCACACAACAGAGGTGACAGTACA
GAAGTCTGGTGCTTTGCAGATGACTTCTGGCATTGAAGGACTGGCTTTGC
TGAAGACAACCAAGGTAAACTTATTTCTCTATACTAATGCATTATACCTG
AATTAGCTCTGGTTGATGTAAGTTAGAAGAGTGTGGGTTTCTTTTTATTG
GTCCTACCATTCTCTGTTCCAAACAAGAAAAGAAAAGGGCG
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