CK937320

Overview
NameCK937320
Unique NameCK937320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 8.194e-62
Identity = 105/151 (69.54%), Postives = 122/151 (80.79%), Query Frame = 2 
Query:   59 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYS 511
            DP  LQD CVAI+DPK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPR +EI +++EGTLYVGFV+S+Q NN L AK LN GDVFVFP G+IHFQ NIGKT A A++
Sbjct:   23 DPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFA 173

HSP 2 Score: 39.2762 bits (90), Expect = 8.194e-62
Identity = 18/27 (66.67%), Postives = 21/27 (77.78%), Query Frame = 3 
Query:  516 LNSQFPGEVTIADTVFGAXPSINPDFL 596
            L+SQ  G +TIADTVFG+ P INPD L
Sbjct:  175 LSSQNAGVITIADTVFGSTPPINPDIL 201
[Close]
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 8.194e-62
Identity = 105/151 (69.54%), Postives = 122/151 (80.79%), Query Frame = 2 
Query:   59 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYS 511
            DP  LQD CVAI+DPK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPR +EI +++EGTLYVGFV+S+Q NN L AK LN GDVFVFP G+IHFQ NIGKT A A++
Sbjct:   23 DPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFA 173

HSP 2 Score: 39.2762 bits (90), Expect = 8.194e-62
Identity = 18/27 (66.67%), Postives = 21/27 (77.78%), Query Frame = 3 
Query:  516 LNSQFPGEVTIADTVFGAXPSINPDFL 596
            L+SQ  G +TIADTVFG+ P INPD L
Sbjct:  175 LSSQNAGVITIADTVFGSTPPINPDIL 201
[Close]
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 1.816e-61
Identity = 104/151 (68.87%), Postives = 121/151 (80.13%), Query Frame = 2 
Query:   59 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYS 511
            DP  LQD CVAI D K+GVFVNGKFCKDPK A+AEDFF+SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPR +EI +++EGTLYVGFV+S+Q NN L AK LN GDVFVFP G+IHFQ NIGKT A A++
Sbjct:   24 DPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFA 174

HSP 2 Score: 39.2762 bits (90), Expect = 1.816e-61
Identity = 18/27 (66.67%), Postives = 21/27 (77.78%), Query Frame = 3 
Query:  516 LNSQFPGEVTIADTVFGAXPSINPDFL 596
            L+SQ  G +TIADTVFG+ P INPD L
Sbjct:  176 LSSQNAGVITIADTVFGSTPPINPDIL 202
[Close]
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 4.027e-61
Identity = 105/151 (69.54%), Postives = 122/151 (80.79%), Query Frame = 2 
Query:   59 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYS 511
            DP  LQD CVAI+DPK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPR +EI +++EGTLYVGFV+S+Q NN L AK LN GDVFVFP G+IHFQ NIGKT A A++
Sbjct:   23 DPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFA 173

HSP 2 Score: 36.965 bits (84), Expect = 4.027e-61
Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 3 
Query:  516 LNSQFPGEVTIADTVFGAXPSINPDFL 596
            L+SQ  G +TIAD VFG+ P INPD L
Sbjct:  175 LSSQNAGVITIADIVFGSTPPINPDIL 201
[Close]
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 5.249e-61
Identity = 103/151 (68.21%), Postives = 122/151 (80.79%), Query Frame = 2 
Query:   59 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYS 511
            DP  LQD CVAI+D K+GVFVNGKFCKDPK A+AEDFFFSGL + G+T N++  + T  NV+QIPGLNT+GIS  RIDYAPYGQ PPH HPR +EI +++EGTLYVGFV+S+Q NN L AK L  GDVFVFP G+IHFQ NIGKT A A++
Sbjct:   24 DPSPLQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFA 174

HSP 2 Score: 39.2762 bits (90), Expect = 5.249e-61
Identity = 18/27 (66.67%), Postives = 21/27 (77.78%), Query Frame = 3 
Query:  516 LNSQFPGEVTIADTVFGAXPSINPDFL 596
            L+SQ  G +TIADTVFG+ P INPD L
Sbjct:  176 LSSQNAGVITIADTVFGSTPPINPDIL 202
[Close]
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.501e-57
Identity = 100/159 (62.89%), Postives = 120/159 (75.47%), Query Frame = 2 
Query:   59 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYSASKQPIPG 535
            DP  LQD CVA++D   GVFVNGKFCKDPK  +AEDFF SGL   GNT NR+G + T+ NV++IPGLNTLG+S  RID+AP GQ PPH HPR +EI +V+EGTL VGFVTS+Q NN L +K L  GDVFVFP G+IHFQ N+G+TNA A++      PG
Sbjct:   26 DPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPG 183

HSP 2 Score: 37.7354 bits (86), Expect = 1.501e-57
Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 3 
Query:  516 LNSQFPGEVTIADTVFGAXPSINPDFL 596
            L SQ PG +TIAD VFG+ PSI P+ L
Sbjct:  177 LGSQNPGTITIADAVFGSKPSIMPEIL 203
[Close]
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 7.375e-57
Identity = 101/151 (66.89%), Postives = 120/151 (79.47%), Query Frame = 2 
Query:   59 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYS 511
            DP  LQD CVAI+D K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEI +++EGTLYVGFV+S+Q NN L AK L+ GDVFVFP G+IHFQ N+GK  A A++
Sbjct:   24 DPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFA 173

HSP 2 Score: 32.7278 bits (73), Expect = 7.375e-57
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 3 
Query:  516 LNSQFPGEVTIADTVFGAXPSINPDFL 596
            L+SQ  G +TIA+TVFG+ P I P+ L
Sbjct:  175 LSSQNAGVITIANTVFGSNPPIYPELL 201
[Close]
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 9.615e-57
Identity = 101/151 (66.89%), Postives = 120/151 (79.47%), Query Frame = 2 
Query:   59 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYS 511
            DP  LQD CVAI+D K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEI +++EGTLYVGFV+S+Q NN L AK L+ GDVFVFP G+IHFQ N+GK  A A++
Sbjct:   24 DPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFA 173

HSP 2 Score: 32.7278 bits (73), Expect = 9.615e-57
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 3 
Query:  516 LNSQFPGEVTIADTVFGAXPSINPDFL 596
            L+SQ  G +TIA+TVFG+ P I P+ L
Sbjct:  175 LSSQNAGVITIANTVFGSNPPIYPELL 201
[Close]
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 2.131e-56
Identity = 101/151 (66.89%), Postives = 120/151 (79.47%), Query Frame = 2 
Query:   59 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYS 511
            DP  LQD CVAI+D K GVFVNG+FCKDP+   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEI +++EGTLYVGFV+S+Q NN L AK L+ GDVFVFP G+IHFQ NIGK  A A++
Sbjct:   24 DPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFA 173

HSP 2 Score: 32.7278 bits (73), Expect = 2.131e-56
Identity = 15/27 (55.56%), Postives = 20/27 (74.07%), Query Frame = 3 
Query:  516 LNSQFPGEVTIADTVFGAXPSINPDFL 596
            L+SQ  G +TIA+TVFG+ P I P+ L
Sbjct:  175 LSSQNAGVITIANTVFGSNPPIYPELL 201
[Close]
BLAST of CK937320 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 3.621e-56
Identity = 97/153 (63.40%), Postives = 115/153 (75.16%), Query Frame = 2 
Query:   56 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRTSEIFLVLEGTLYVGFVTSDQLNNTLIAKALNKGDVFVFPQGLIHFQFNIGKTNAAAYSA 514
            +DP  LQD CV +N P DGVFVNGKFCKDP++  A+DFFFS L +PGNT N +G + T  NV  + GLNTLGIS  RIDYAP GQ PPH HPR +EI +V +GTL VGF++S+Q  N L AK LN GDVFVFP+GLIHFQFN+G T A A +A
Sbjct:   25 SDPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAA 177

HSP 2 Score: 33.4982 bits (75), Expect = 3.621e-56
Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 3 
Query:  507 ILLLNSQFPGEVTIADTVFGAXPSINPDFL 596
            I  L+SQ  G +TIA+T+FG+ P ++P+ L
Sbjct:  175 IAALSSQNAGVITIANTIFGSKPDVDPNVL 204
The following BLAST results are available for this feature:
BLAST of CK937320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL117_ARATH8.194e-6269.54Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH8.194e-6269.54Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL114_ARATH1.816e-6168.87Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL119_ARATH4.027e-6169.54Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL113_ARATH5.249e-6168.21Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL17_ARATH1.501e-5762.89Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL118_ARATH7.375e-5766.89Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL120_ARATH9.615e-5766.89Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL116_ARATH2.131e-5666.89Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL18_ARATH3.621e-5663.40Germin-like protein subfamily 1 member 8 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004511_D04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937320 ID=CK937320; Name=CK937320; organism=Citrus sinensis; type=EST; length=596bp
TCAATTTCTTATAGGTATTGCCCTCTTGGCTTTGGCTTCTTCTTTGGCCT
CTGCCACTGACCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATGAC
CCCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCT
TGCGAGAGCAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAACA
CAGCAAATCGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATT
CCAGGACTCAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCACC
ATATGGCCAAAGGCCACCTCACATTCACCCCCGTACCAGCGAAATCTTCT
TAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAACTG
AATAACACACTCATCGCAAAAGCTCTAAATAAGGGAGATGTTTTTGTGTT
TCCACAAGGTTTGATTCACTTCCAATTCAACATTGGAAAAACAAATGCAG
CTGCCTATTCTGCTTCTAAACAGCCAATTCCCGGGTGAAGTTACCATAGC
CGACACAGTCTTTGGAGCCANTCCTTCAATCAATCCCGATTTTCTT
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