CK937313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937313 vs. ExPASy Swiss-Prot
Match: RS27A_SOLTU (40S ribosomal protein S27a OS=Solanum tuberosum GN=UBI3 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.512e-26 Identity = 53/57 (92.98%), Postives = 54/57 (94.74%), Query Frame = 2 Query: 68 LAVLQFYKVDDSGKVQRLRKERPNAECGAGTFKANHFDRHYCGKCGLTYVYQKAGGD 238 LAVLQFYKVDD+GKVQRLRKE PNAECGAGTF ANHFDRHYCGKCGLTYVY KAGGD Sbjct: 24 LAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD 80
BLAST of CK937313 vs. ExPASy Swiss-Prot
Match: RS27A_SOLLC (40S ribosomal protein S27a OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.512e-26 Identity = 53/57 (92.98%), Postives = 54/57 (94.74%), Query Frame = 2 Query: 68 LAVLQFYKVDDSGKVQRLRKERPNAECGAGTFKANHFDRHYCGKCGLTYVYQKAGGD 238 LAVLQFYKVDD+GKVQRLRKE PNAECGAGTF ANHFDRHYCGKCGLTYVY KAGGD Sbjct: 24 LAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD 80
BLAST of CK937313 vs. ExPASy Swiss-Prot
Match: RS27A_LUPAL (40S ribosomal protein S27a OS=Lupinus albus PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 7.323e-24 Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = 2 Query: 68 LAVLQFYKVDDSGKVQRLRKERPNAECGAGTFKANHFDRHYCGKCGLTYVYQKA 229 LAVLQFYKVDDSGKVQRLRKE PN ECGAGTF ANHFDRHYCGKCG TYVYQKA Sbjct: 24 LAVLQFYKVDDSGKVQRLRKECPNTECGAGTFMANHFDRHYCGKCGKTYVYQKA 77
BLAST of CK937313 vs. ExPASy Swiss-Prot
Match: R27AB_ARATH (40S ribosomal protein S27a-2 OS=Arabidopsis thaliana GN=UBQ6 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.747e-23 Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = 2 Query: 68 LAVLQFYKVDDSGKVQRLRKERPNAECGAGTFKANHFDRHYCGKCGLTYVYQKAG 232 LAVLQFYKVD SGKVQRLRKE PNA CGAGTF A+HFDRHYCGKCGLTYVYQK G Sbjct: 24 LAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 78
BLAST of CK937313 vs. ExPASy Swiss-Prot
Match: R27AC_ARATH (40S ribosomal protein S27a-3 OS=Arabidopsis thaliana GN=UBQ5 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 6.199e-23 Identity = 48/55 (87.27%), Postives = 50/55 (90.91%), Query Frame = 2 Query: 68 LAVLQFYKVDDSGKVQRLRKERPNAECGAGTFKANHFDRHYCGKCGLTYVYQKAG 232 LAVLQFYK+D SGKVQRLRKE PNA CGAGTF A+HFDRHYCGKCGLTYVYQK G Sbjct: 24 LAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 78
BLAST of CK937313 vs. ExPASy Swiss-Prot
Match: RS27A_ASPOF (40S ribosomal protein S27a OS=Asparagus officinalis PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.077e-22 Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = 2 Query: 68 LAVLQFYKVDDSGKVQRLRKERPNAECGAGTFKANHFDRHYCGKCGLTYVYQK 226 LAVLQFYKVDD+GKV RLRKE PNAECGAGTF ANH DRHYCGKCGLTYVYQK Sbjct: 24 LAVLQFYKVDDTGKVIRLRKECPNAECGAGTFMANHKDRHYCGKCGLTYVYQK 76
BLAST of CK937313 vs. ExPASy Swiss-Prot
Match: RS27A_HORVU (40S ribosomal protein S27a OS=Hordeum vulgare GN=MUB1 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.578e-21 Identity = 49/56 (87.50%), Postives = 51/56 (91.07%), Query Frame = 2 Query: 68 LAVLQFYKVDDS-GKVQRLRKERPNAECGAGTFKANHFDRHYCGKCGLTYVY-QKA 229 LAVLQFYKVDD+ GKV RLRKE PNA+CGAGTF ANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNADCGAGTFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of CK937313 vs. ExPASy Swiss-Prot
Match: RS27A_ORYSJ (40S ribosomal protein S27a OS=Oryza sativa subsp. japonica GN=UBQ6 PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 3.761e-20 Identity = 48/56 (85.71%), Postives = 50/56 (89.29%), Query Frame = 2 Query: 68 LAVLQFYKVDDS-GKVQRLRKERPNAECGAGTFKANHFDRHYCGKCGLTYVY-QKA 229 LAVLQFYKVDD+ GKV RLRKE PN +CGAGTF ANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNNDCGAGTFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of CK937313 vs. ExPASy Swiss-Prot
Match: RS27A_MAIZE (40S ribosomal protein S27a OS=Zea mays GN=UBF9 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.761e-20 Identity = 48/56 (85.71%), Postives = 49/56 (87.50%), Query Frame = 2 Query: 68 LAVLQFYKVDDS-GKVQRLRKERPNAECGAGTFKANHFDRHYCGKCGLTYVY-QKA 229 LAVLQFYKVDD+ GKV RLRKE PN ECGAG F ANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNTECGAGVFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of CK937313 vs. ExPASy Swiss-Prot
Match: R27AA_ARATH (40S ribosomal protein S27a-1 OS=Arabidopsis thaliana GN=UBQ15 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.429e-19 Identity = 42/54 (77.78%), Postives = 47/54 (87.04%), Query Frame = 2 Query: 68 LAVLQFYKVDDSGKVQRLRKERPNAECGAGTFKANHFDRHYCGKCGLTYVYQKA 229 LAVLQFYKVD SGKVQRL+KE P+ CG GTF A+HFDRHYCGKCG TYV++KA Sbjct: 24 LAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKA 77 The following BLAST results are available for this feature:
BLAST of CK937313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937313 ID=CK937313; Name=CK937313; organism=Citrus sinensis; type=EST; length=501bpback to top |