CK937299

Overview
NameCK937299
Unique NameCK937299
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK937299 vs. ExPASy Swiss-Prot
Match: Y5880_ARATH (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.019e-35
Identity = 82/143 (57.34%), Postives = 93/143 (65.03%), Query Frame = 2 
Query:    5 QSIVHVLYFEQLRLRNALSCSYGDEEHKPVHQ---SWRISSGALSAAMSPRDNYASXXXXXXXXXXXXXXXXXXXNDLEKEHVCMKRDMVKSHSRKFMSSFSRKIGKLXXXXXXXXXXXXXXXXXXYRTDSKVI-ERTCASTD 421
            QSIV VLYFEQL+LR++L  SY DEE KP  Q   SWRI+SGALSA MSP+DNYAS                   NDLEKEH+CMKRDM +SHSRKFMSSFS+K+GKL                  +RTDSKV+ ERTCASTD
Sbjct:  472 QSIVQVLYFEQLKLRSSLCSSYSDEEPKPKQQQQQSWRINSGALSATMSPKDNYASLRRENRELKLELARLRMRLNDLEKEHICMKRDMQRSHSRKFMSSFSKKMGKLSFFGHSSSRGSSSPSKQSFRTDSKVLMERTCASTD 614
The following BLAST results are available for this feature:
BLAST of CK937299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5880_ARATH5.019e-3557.34BTB/POZ domain-containing protein At5g48800 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004511_H04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937299 ID=CK937299; Name=CK937299; organism=Citrus sinensis; type=EST; length=714bp
GGGCCAATCTATTGTTCATGTGCTCTACTTTGAGCAGTTAAGGCTCCGTA
ATGCCTTGTCCTGCTCTTACGGTGATGAAGAACACAAGCCAGTGCACCAG
TCTTGGCGGATCAGCAGTGGTGCTCTCAGTGCAGCAATGTCTCCGCGAGA
CAACTATGCATCATTGAGGCGAGAAAACAGAGAGCTAAAACTAGAGTTAG
CTCGTTTAAGGATGAGATTAAATGATCTGGAGAAAGAACACGTATGTATG
AAGAGGGATATGGTGAAGTCTCATTCTCGTAAATTTATGAGTTCTTTCTC
AAGGAAAATTGGTAAGCTGAGCTTCTTCGGACACAGTTCCTCACGGGGTT
CAAGTTCCCCCTCAAAGAATTCCTACAGAACCGATTCTAAGGTGATTGAG
AGAACATGTGCCAGCACGGATTAGGCAATTCACACCAGCAATCTTTTCTC
TGTAATTGCCGAGGAACTGCAAGCCTTGCTCTGTGACCTCTTTGTTCTAG
TTAATTTCCATCTTGGCTTCTCTCTGTATATGAGTTGTGATGCTTTGACT
TAGCAACGTCCGCACTCCTCTTGAATGCAAATTGTGTTTTTTTCGCAGTG
CGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAGCCTACAA
CCAAAACAAATCAAAAAACAAAAAAAANNNNNNNNNNAAAAAAAAAAAAA
AAAAAAAAAAAAAA
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