CK937288

Overview
NameCK937288
Unique NameCK937288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length615
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937288 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 8.866e-93
Identity = 165/204 (80.88%), Postives = 184/204 (90.20%), Query Frame = 2
Query:    2 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSL 613
            +R+PSIR+RV+DTLS HRNEL+SLLSRYVAQGKGILQPH LIDELDNI G+D    +L++GPF ++I SAQEAIVLPPFVAIAVRPRPGVWEYVRVNV+ELSVEQLSVSEYL FKEELV+   N+  +LELD EPFNA+FPRP RSSSIGNGVQFLNRHLSS+MFRNKDCLEPLLDFLR H YKGH LMLNDRIQSIS+LQS+L
Sbjct:    8 TRVPSIRDRVQDTLSAHRNELISLLSRYVAQGKGILQPHNLIDELDNILGEDHATLDLKNGPFGQIINSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVFELSVEQLSVSEYLSFKEELVEGKSNDNIILELDLEPFNASFPRPTRSSSIGNGVQFLNRHLSSNMFRNKDCLEPLLDFLRVHTYKGHALMLNDRIQSISKLQSAL 211          
BLAST of CK937288 vs. ExPASy Swiss-Prot
Match: SUS1_MAIZE (Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 3.625e-70
Identity = 130/204 (63.73%), Postives = 164/204 (80.39%), Query Frame = 2
Query:    2 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSL 613
            +R+ S+RER+  T S H NEL++L SRYV QGKG+LQ H L+ E D +F  D+ +      PF +++++AQEAIVLPP+VA+A+RPRPGVW+Y+RVNV EL+VE+LSVSEYL FKE+LVD   N  FVLELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F++K+ L PLL+FL+AH YKG  +MLNDRIQS+  LQSSL
Sbjct:    6 TRLHSLRERLGATFSSHPNELIALFSRYVHQGKGMLQRHQLLAEFDALFDSDKEKY----APFEDILRAAQEAIVLPPWVALAIRPRPGVWDYIRVNVSELAVEELSVSEYLAFKEQLVDGQSNSNFVLELDFEPFNASFPRPSMSKSIGNGVQFLNRHLSSKLFQDKESLYPLLNFLKAHNYKGTTMMLNDRIQSLRGLQSSL 205          
BLAST of CK937288 vs. ExPASy Swiss-Prot
Match: SUS2_TULGE (Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 6.183e-70
Identity = 127/204 (62.25%), Postives = 165/204 (80.88%), Query Frame = 2
Query:    2 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSL 613
            +R+ S+RER+ DTLS H+NEL++L SR+V QG+G+LQPH L+ E + +    + R+ L+DG F +V+K+AQEAIV+PP+VA+A+RPRPGVWEYVRVNV EL+VE+L+V EYL FKEELVD S    F LELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F +K+ + PLL+FL+ H Y G  +MLNDRIQ++  LQ+SL
Sbjct:    7 TRVHSVRERLTDTLSAHKNELLALFSRFVKQGQGMLQPHQLLTEYEAVIPAAD-REKLKDGVFEDVLKAAQEAIVIPPWVALAIRPRPGVWEYVRVNVSELAVEELTVPEYLQFKEELVDGSGQSNFTLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLKEHHYNGTSMMLNDRIQTLGALQASL 209          
BLAST of CK937288 vs. ExPASy Swiss-Prot
Match: SUS2_MAIZE (Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 3.068e-69
Identity = 128/204 (62.75%), Postives = 164/204 (80.39%), Query Frame = 2
Query:    2 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSL 613
            SR+ S+RER+ D+LS H NELV++ +R    GKG+LQPH +I E +N   + E R+ L+DG F +V+++AQEAIV+PP+VA+A+RPRPGVWEYVRVNV EL+VE+L V EYL FKE+LV+   N  FVLELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F +K+ + PLL+FLRAH YKG  +MLNDRI+S+S LQ +L
Sbjct:   11 SRLHSVRERIGDSLSAHPNELVAVFTRLKNLGKGMLQPHQIIAEYNNAIPEAE-REKLKDGAFEDVLRAAQEAIVIPPWVALAIRPRPGVWEYVRVNVSELAVEELRVPEYLQFKEQLVEEGPNNNFVLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLRAHNYKGMTMMLNDRIRSLSALQGAL 213          
BLAST of CK937288 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 1.166e-68
Identity = 130/204 (63.73%), Postives = 160/204 (78.43%), Query Frame = 2
Query:    2 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSL 613
            +R+ S+RER+++TL+ +RNE+++LLSR  A+GKGILQ H +I E + I   +E RQ L DG F EV++S QEAIVLPP+VA+AVRPRPGVWEY+RVNV+ L VE+L  +EYLHFKEELVD S N  FVLELDFEPFNA FPRP  + SIGNGVQFLNRHLS+ +F +K+ L PLL+FLR H  KG  LMLNDRIQ+   LQ  L
Sbjct:    7 TRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEI--PEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEELQPAEYLHFKEELVDGSSNGNFVLELDFEPFNAAFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSVKGKTLMLNDRIQNPDALQHVL 208          
BLAST of CK937288 vs. ExPASy Swiss-Prot
Match: SUS2_ORYSJ (Sucrose synthase 2 OS=Oryza sativa subsp. japonica GN=SUS2 PE=1 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 1.989e-68
Identity = 128/204 (62.75%), Postives = 163/204 (79.90%), Query Frame = 2
Query:    2 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSL 613
            +R+ S+RER+  T S H NEL++L SRYV QGKG+LQ H L+ E D +   D+ +      PF +++++AQEAIVLPP+VA+A+RPRPGVW+Y+RVNV EL+VE+LSVSEYL FKE+LVD   N  FVLELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F++K+ L PLL+FL+AH +KG  +MLNDRIQS+  LQSSL
Sbjct:    6 ARLHSLRERLGATFSSHPNELIALFSRYVNQGKGMLQRHQLLAEFDALIEADKEKY----APFEDILRAAQEAIVLPPWVALAIRPRPGVWDYIRVNVSELAVEELSVSEYLAFKEQLVDGHTNSNFVLELDFEPFNASFPRPSMSKSIGNGVQFLNRHLSSKLFQDKESLYPLLNFLKAHNHKGTTMMLNDRIQSLRGLQSSL 205          
BLAST of CK937288 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 5.787e-68
Identity = 126/201 (62.69%), Postives = 162/201 (80.60%), Query Frame = 2
Query:    2 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQ 604
            +R+ S+RER+++TL  +RNE+V+LLSR + +GKGI + H LI E++ I   +  R+ L DG F EV++SAQEAIVLPP+VA+AVRPRPGVWEY+RVNV+ L VE+L V EYLHFKEELVD S N  FVLELDF+PFNA+FPRP  S SIGNGV+FLNRHLS+ +F +K+ + PLL+FLR H YKG  +MLNDRIQ+++ LQ
Sbjct:    7 TRVHSLRERLDETLVANRNEIVALLSRIIGKGKGICRNHQLIAEVEAI--PEATRKKLLDGAFGEVLRSAQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELRVPEYLHFKEELVDGSTNGNFVLELDFDPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCYKGKNMMLNDRIQNVNALQ 205          
BLAST of CK937288 vs. ExPASy Swiss-Prot
Match: SUS3_ORYSJ (Sucrose synthase 3 OS=Oryza sativa subsp. japonica GN=SUS3 PE=1 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 5.787e-68
Identity = 124/204 (60.78%), Postives = 161/204 (78.92%), Query Frame = 2
Query:    2 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSL 613
            +R+ S+RER+ D+LS H NELV++ SR V QGKG+LQPH +I E +    + E R+ L+D    +V++ AQEAIV+PP++A+A+RPRPGVWEY+R+NV +L VE+LSV EYL FKE+LVD S    FVLELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F +K+ + PLL+FLRAH YKG  +MLNDRI+S+  LQ +L
Sbjct:   11 TRLHSMRERIGDSLSAHTNELVAVFSRLVNQGKGMLQPHQIIAEYNAAIPEGE-REKLKDSALEDVLRGAQEAIVIPPWIALAIRPRPGVWEYLRINVSQLGVEELSVPEYLQFKEQLVDGSTQNNFVLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLRAHNYKGMTMMLNDRIRSLDALQGAL 213          
BLAST of CK937288 vs. ExPASy Swiss-Prot
Match: SUS1_ORYSJ (Sucrose synthase 1 OS=Oryza sativa subsp. japonica GN=SUS1 PE=1 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 7.558e-68
Identity = 126/204 (61.76%), Postives = 162/204 (79.41%), Query Frame = 2
Query:    2 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSL 613
            SR+ S+RER+ D+LS H NELV++ +R V  GKG+LQ H +I E +N   + + R+ L+DG F +V++SAQE IV+ P+VA+A+RPRPGVWEYVRVNV EL+VE L+V EYL FKE+LV+   N  FVLELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F +K+ + PLL+FLRAH YKG  +MLNDRI+S+S LQ +L
Sbjct:   11 SRLHSVRERIGDSLSAHPNELVAVFTRLVNLGKGMLQAHQIIAEYNNAISEAD-REKLKDGAFEDVLRSAQEGIVISPWVALAIRPRPGVWEYVRVNVSELAVELLTVPEYLQFKEQLVEEGTNNNFVLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLRAHNYKGMTMMLNDRIRSLSALQGAL 213          
BLAST of CK937288 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 2.872e-67
Identity = 128/204 (62.75%), Postives = 159/204 (77.94%), Query Frame = 2
Query:    2 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSL 613
            +R+ S+RER+++TL+ +RNE+++LLSR  A+GKGILQ H +I E + I   +E RQ L DG F EV++S QEAIVLPP+VA+AVRPRPGVWEY+RVNV+ L VE L  +E+L FKEELVD S N  FVLELDFEPF A+FPRP  + SIGNGVQFLNRHLS+ +F +K+ L PLL+FLR H YKG  LMLNDRIQ+   LQ  L
Sbjct:    7 TRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEI--PEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVENLQPAEFLKFKEELVDGSANGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSYKGKTLMLNDRIQNPDSLQHVL 208          
The following BLAST results are available for this feature:
BLAST of CK937288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SUS2_PEA8.866e-9380.88Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUS1_MAIZE3.625e-7063.73Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1[more]
SUS2_TULGE6.183e-7062.25Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS2_MAIZE3.068e-6962.75Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1[more]
SUSY_SOYBN1.166e-6863.73Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUS2_ORYSJ1.989e-6862.75Sucrose synthase 2 OS=Oryza sativa subsp. japonica... [more]
SUSY_ALNGL5.787e-6862.69Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUS3_ORYSJ5.787e-6860.78Sucrose synthase 3 OS=Oryza sativa subsp. japonica... [more]
SUS1_ORYSJ7.558e-6861.76Sucrose synthase 1 OS=Oryza sativa subsp. japonica... [more]
SUSY_VICFA2.872e-6762.75Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004511_H12 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937288 ID=CK937288; Name=CK937288; organism=Citrus sinensis; type=EST; length=615bp
AAGTCGGATTCCGAGCATCAGAGAGCGCGTGGAGGACACTCTCTCTGTTC
ATCGTAATGAACTCGTTTCTCTCCTCTCCAGGTATGTGGCTCAAGGCAAA
GGGATTTTGCAACCGCATGTACTGATCGACGAGCTTGATAACATTTTTGG
CGACGATGAAGGTCGGCAGAACCTTCGGGATGGTCCGTTTAGCGAAGTTA
TCAAATCTGCTCAGGAAGCGATAGTTCTGCCTCCGTTTGTGGCTATAGCA
GTCCGTCCAAGACCAGGTGTTTGGGAATATGTCCGTGTTAATGTCTATGA
ACTTAGCGTGGAGCAACTAAGTGTTTCTGAATACCTTCACTTCAAAGAAG
AACTTGTAGATGCGTCGTTTAATGAAAGATTTGTGCTTGAGCTTGATTTT
GAACCATTCAATGCAACTTTTCCTCGCCCGAATCGGTCTTCATCAATTGG
TAATGGGGTTCAGTTCCTCAACCGTCACCTTTCTTCAAGTATGTTCCGCA
ACAAAGACTGTTTGGAGCCCTTACTTGATTTCCTTCGAGCACACAAATAT
AAAGGGCATCTATTGATGTTGAATGATCGGATTCAAAGCATTTCCCGGCT
TCAGTCATCTCTGTC
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