CK937283

Overview
NameCK937283
Unique NameCK937283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937283 vs. ExPASy Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.342e-40
Identity = 75/112 (66.96%), Postives = 87/112 (77.68%), Query Frame = 1
Query:   88 KFNVGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHERPPPINWTPH 423
            KFNVGG   WVTNP ENY  WSG+NRFLV+DTL+F Y KG+DSVL VNK DYD+CNTK P+ ++D GDSE  LDR GPFYFISGN D+C+KGQKL VVV+  R P    +PH
Sbjct:   30 KFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTAQSPH 141          
BLAST of CK937283 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.039e-23
Identity = 55/111 (49.55%), Postives = 73/111 (65.77%), Query Frame = 1
Query:   97 VGGKHG-WVTNPGENYN--KWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHERPPPINWTP 420
            VGGK G W   P  +Y+  +W+ + RF V D + F+Y+ G DSVL V K+ Y+SCNT  PL     G+++ KLDRSGPFYFISG + HC+KGQKL +VV+  R   I+  P
Sbjct:   33 VGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVISPRHSVISPAP 143          
BLAST of CK937283 vs. ExPASy Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.140e-20
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 1
Query:   97 VGGK-HGWV--TNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHER 396
            VGGK   W   ++P E+ NKW+   RF V DTL +KY +  DSVL V KD Y +CNT  P     +GD++ KL+RSGP++FISG+  +C +G+KL +VV+  R
Sbjct:   28 VGGKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSR 130          
BLAST of CK937283 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.952e-14
Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 1
Query:   97 VGGKHGWVTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVV 384
            VG   GW T    +Y KW+  N+F V D+L F Y     +VL V+++ + SCN+  P     SG     L R G FYF+ G   HCQ GQK+ + V
Sbjct:    6 VGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101          
BLAST of CK937283 vs. ExPASy Swiss-Prot
Match: NO552_SOYBN (Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.763e-12
Identity = 41/105 (39.05%), Postives = 64/105 (60.95%), Query Frame = 1
Query:   88 KFNVGGKH-GW---VTNPGENYNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNT-KKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVL 387
            K+ VGG    W   ++ P ++ + W+  +RF + DTL FKY+K ++SV   N+ DY+ CNT  K  +  + G+++  L + G  +FISGN  HCQ G KL V+V+
Sbjct:   28 KYVVGGSEKSWKFPLSKP-DSLSHWANSHRFKIGDTLIFKYEKRTESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLVI 131          
BLAST of CK937283 vs. ExPASy Swiss-Prot
Match: NO16_MEDTR (Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 36/108 (33.33%), Postives = 60/108 (55.56%), Query Frame = 1
Query:  139 YNKWSGRNRFLVNDTLFFKYKKGSDSVLLVNKDDYDSCNTKKPLLKLDSGDSEFKLDRSGPFYFISGNHDHCQKGQKLIVVVLHERP---PPINWTPHHETSTACPVS 453
            + +W+  + F V DT+ F+Y   ++SV  VN+ DY  C+T    ++   G+++  LD+ G ++FISG   HC+ G KL VVV ++     PP+   P   + +  P S
Sbjct:   46 FARWASAHEFTVGDTILFEYDNETESVHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVYHFISGTKRHCKMGLKLAVVVQNKHDLVLPPLITMPMPPSPSPSPNS 153          
The following BLAST results are available for this feature:
BLAST of CK937283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ENL2_ARATH5.342e-4066.96Early nodulin-like protein 2 OS=Arabidopsis thalia... [more]
ENL1_ARATH2.039e-2349.55Early nodulin-like protein 1 OS=Arabidopsis thalia... [more]
ENL3_ARATH6.140e-2047.57Early nodulin-like protein 3 OS=Arabidopsis thalia... [more]
MAVI_CUCPE2.952e-1439.58Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
NO552_SOYBN2.763e-1239.05Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2... [more]
NO16_MEDTR5.210e-1133.33Early nodulin-16 OS=Medicago truncatula GN=ENOD16 ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCGF1004511_H07 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937283 ID=CK937283; Name=CK937283; organism=Citrus sinensis; type=EST; length=851bp
GGGGATTTCTGTTCAATGGAGTTTCAGAAATCTCTTTGCCTTTCCTTGGC
TCTCTTTGCATTTTTCATCTCTTCCTCTCACGCACTCAAATTCAACGTGG
GTGGCAAACACGGCTGGGTTACAAACCCTGGAGAAAATTACAACAAATGG
TCTGGGAGAAACAGGTTCCTCGTCAATGATACCCTCTTTTTCAAGTACAA
GAAAGGATCAGACTCGGTGTTGTTAGTGAACAAAGATGATTACGACAGCT
GCAACACGAAGAAGCCTTTGCTGAAACTGGATTCGGGTGACTCAGAGTTC
AAGCTTGATCGTTCGGGTCCTTTCTATTTCATAAGTGGAAACCATGATCA
TTGCCAAAAGGGACAGAAATTAATCGTCGTCGTTTTGCATGAAAGGCCTC
CCCCTATCAACTGGACCCCCCACCACGAAACCTCCACCGCATGCCCCGTC
TCCTAAGTCTCCTTCTCCGGCCACACAGCCGCCGGCGACTTCCCCCTCCA
CCTCACCAACATCTCATGCACCTTCGGCTAATCCTCCTAAAGGGTCCTCT
CCGACGCCGGCAACTTCACCTTCCACGTCTTCGCCTTATCCTCCAAAAGG
ATACTCTCCAGTGCCGGCGACTTCACCTTCCACGTCACCATCATCTCATG
CGCCTTCGCCTTATCCTCCAAAAGGGTACCCTCCGGTGCCGGCAACTTCA
CCTTCTACGTCACCATCATCATCCCAATCACCTGCGGCTAATGCTCCAAC
TGGGCTGTCACCGGCTCCGGGAACTTCCCCCTCCACGTCACCGTCATCGC
AACCACCTGCGGCTAATGCTCCAACTGGGCTGTCACCGGCTCCGGGAACT
T
back to top