CX675280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675280 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.041e-49 Identity = 90/104 (86.54%), Postives = 99/104 (95.19%), Query Frame = 3 Query: 303 RRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTAWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFRV 614 RRVPCRK+GGIRFTING RYFNLVL+TNVAGAGDI+R +VKGSRT WMS+SRNWGQNWQSNAVLVGQ+LSFRV SDRR+STSWN+VP+NWQFGQTFVGKNFRV Sbjct: 154 RRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNFRV 257
BLAST of CX675280 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 3.956e-49 Identity = 89/104 (85.58%), Postives = 100/104 (96.15%), Query Frame = 3 Query: 303 RRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTAWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFRV 614 RRVPCRK+GGIRFTINGFRYFNLVLVTNVAGAG+I+R+ VKG+ T+WM+MSRNWGQNWQSN+VLVGQSLSFRV +SDRRSSTSWNI PANW+FGQTF+GKNFRV Sbjct: 154 RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNFRV 257
BLAST of CX675280 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.712e-48 Identity = 88/104 (84.62%), Postives = 96/104 (92.31%), Query Frame = 3 Query: 303 RRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTAWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFRV 614 RRV CRK GGIRFTING RYFNLVL+TNVAGAGDI R +VKGS+T WMS++RNWGQNWQSNAVLVGQSLSFRV +SDRR+STSWNI P+NWQFGQTFVGKNFRV Sbjct: 157 RRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNFRV 260
BLAST of CX675280 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.273e-47 Identity = 89/104 (85.58%), Postives = 95/104 (91.35%), Query Frame = 3 Query: 303 RRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTAWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFRV 614 RRVPCRK GGIRFT+NGFRYFNLVLVTNVAGAGDI V+VKGS+T W+ MSRNWGQNWQSNAVL+GQSLSFRV ASDRRSSTSWN+ PA WQFGQTF GKNFRV Sbjct: 159 RRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKNFRV 262
BLAST of CX675280 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 8.249e-47 Identity = 85/104 (81.73%), Postives = 93/104 (89.42%), Query Frame = 3 Query: 303 RRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTAWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFRV 614 RRVPCRKKGG+RFTINGFRYFNLVL+TNVAGAGDI+R +VKG+ T WM MSRNWGQNWQSN+VLVGQ+LSFRV SDRR+STSWN PA W FGQTF GKNFRV Sbjct: 161 RRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGKNFRV 264
BLAST of CX675280 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.838e-46 Identity = 85/104 (81.73%), Postives = 96/104 (92.31%), Query Frame = 3 Query: 303 RRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTAWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFRV 614 RR+PCRKKGGIRFTINGF+YFNLVLVTNVAGAGD+++V+VKGS T W+ +SRNWGQNWQSNA+LVGQSLSFRVK SD RSSTS NI P+NWQFGQT+ GKNFRV Sbjct: 155 RRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNFRV 258
BLAST of CX675280 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 3.474e-37 Identity = 74/102 (72.55%), Postives = 81/102 (79.41%), Query Frame = 3 Query: 303 RRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTAWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 608 RRVPC KKGGIRFTING YFNLVLVTNVAG GD+ V++KGS T W MSRNWGQNWQSN+ L GQSLSF+V SD R+ TS N+VPA WQFGQTF G F Sbjct: 150 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQF 251
BLAST of CX675280 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 3.474e-37 Identity = 73/103 (70.87%), Postives = 82/103 (79.61%), Query Frame = 3 Query: 303 RRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTAWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFR 611 RRVPC ++GGIRFTING YFNLVLVTNV GAGD+ V VKGSRT W MSRNWGQNWQSN +L GQ+LSF+V ASD R+ S NI PA+W FGQTF G+ FR Sbjct: 151 RRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQFR 253
BLAST of CX675280 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.474e-37 Identity = 71/103 (68.93%), Postives = 82/103 (79.61%), Query Frame = 3 Query: 303 RRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTAWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNFR 611 RRV CR+KGGIRFTING YFNLVL+TNVAGAGD++ V++KG+ T W SMSRNWGQNWQSNA L GQ+LSF+V SD R+ S N P NW FGQT+ GK FR Sbjct: 150 RRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFR 252
BLAST of CX675280 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.925e-37 Identity = 73/102 (71.57%), Postives = 81/102 (79.41%), Query Frame = 3 Query: 303 RRVPCRKKGGIRFTINGFRYFNLVLVTNVAGAGDILRVNVKGSRTAWMSMSRNWGQNWQSNAVLVGQSLSFRVKASDRRSSTSWNIVPANWQFGQTFVGKNF 608 RRVPC KKGG+RFT+NG YFNLVLVTNVAGAGD+ V++KGSRT W MSRNWGQNWQSNA L GQSLSF+V ASD R+ TS N+ WQFGQTF G F Sbjct: 145 RRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEGGQF 246 The following BLAST results are available for this feature:
BLAST of CX675280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675280 ID=CX675280; Name=CX675280; organism=Citrus sinensis; type=EST; length=889bpback to top |