CK937240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_CITSI (ATP synthase subunit alpha, chloroplastic OS=Citrus sinensis GN=atpA PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 9.987e-103 Identity = 115/117 (98.29%), Postives = 115/117 (98.29%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 D SKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGS LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 172.94 bits (437), Expect = 9.987e-103 Identity = 95/127 (74.80%), Postives = 95/127 (74.80%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQF 737 GKLK SDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFT RFLLQEQF Sbjct: 381 GKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTEEAEALLQEAIQEQKERFLLQEQF 507
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_EUCGG (ATP synthase subunit alpha, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=atpA PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.427e-101 Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL SLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 166.392 bits (420), Expect = 1.427e-101 Identity = 91/126 (72.22%), Postives = 93/126 (73.81%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 734 GKLK SDLDKATQNQLARGQRLRELLKQ+QAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTY+KTNKPQFQEIISSTK FT RFLLQEQ Sbjct: 381 GKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYVKTNKPQFQEIISSTKTFTEEAEALLKEAIQEQKERFLLQEQ 506
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_DAUCA (ATP synthase subunit alpha, chloroplastic OS=Daucus carota GN=atpA PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 3.169e-101 Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 D SKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 165.622 bits (418), Expect = 3.169e-101 Identity = 90/126 (71.43%), Postives = 93/126 (73.81%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 734 GKLK SDLDKATQNQLARGQRLRELLKQ+Q+APL VEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFT RF+LQEQ Sbjct: 381 GKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLAVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTEEAEALLKEAIQEQMERFILQEQ 506
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_HELAN (ATP synthase subunit alpha, chloroplastic OS=Helianthus annuus GN=atpA PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 7.038e-101 Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL SLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 164.081 bits (414), Expect = 7.038e-101 Identity = 88/126 (69.84%), Postives = 93/126 (73.81%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 734 GKLK SDLDKATQNQLARGQRLRELLKQ+Q+APL VEEQI+TIYTGTNGYLDSLE+GQVRKFLVELRTYLKTNKPQFQEIISSTKIFT RF+LQEQ Sbjct: 381 GKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLAVEEQILTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTEEAEAILKEAIQEQRERFILQEQ 506
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_MANES (ATP synthase subunit alpha, chloroplastic OS=Manihot esculenta GN=atpA PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 2.660e-100 Identity = 115/117 (98.29%), Postives = 115/117 (98.29%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 164.466 bits (415), Expect = 2.660e-100 Identity = 89/126 (70.63%), Postives = 93/126 (73.81%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 734 GKLK SDLDKATQNQLARGQRLRELLKQ+Q+APLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK FT RF++QEQ Sbjct: 381 GKLKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKTFTEEAETLLKEAIQEQKERFVIQEQ 506
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_ATRBE (ATP synthase subunit alpha, chloroplastic OS=Atropa belladonna GN=atpA PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 3.470e-100 Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFN+GIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 165.236 bits (417), Expect = 3.470e-100 Identity = 89/126 (70.63%), Postives = 93/126 (73.81%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 734 GKLK SDLDKATQNQLARGQRLRELLKQ+Q+APLTVEEQIMTIYTGTNGYLDSLE+GQVRKFLVELRTYLKTNKPQFQEIISSTK FT RF+LQEQ Sbjct: 381 GKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTNKPQFQEIISSTKTFTEEAEALLKEAIQEQMKRFILQEQ 506
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_SOLTU (ATP synthase subunit alpha, chloroplastic OS=Solanum tuberosum GN=atpA PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.711e-99 Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFN+GIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 162.925 bits (411), Expect = 1.711e-99 Identity = 88/126 (69.84%), Postives = 92/126 (73.02%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 734 GKLK SDLDKATQNQLARGQRLRELLKQ+Q+APLTVEEQIMTIYTGTNGYLDSLE+GQVRKFLVELRTYLKT KPQFQEIISSTK FT RF+LQEQ Sbjct: 381 GKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTTKPQFQEIISSTKTFTEEAEALLKEAIQEQMDRFILQEQ 506
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_SOLLC (ATP synthase subunit alpha, chloroplastic OS=Solanum lycopersicum GN=atpA PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.711e-99 Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFN+GIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 162.925 bits (411), Expect = 1.711e-99 Identity = 88/126 (69.84%), Postives = 92/126 (73.02%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 734 GKLK SDLDKATQNQLARGQRLRELLKQ+Q+APLTVEEQIMTIYTGTNGYLDSLE+GQVRKFLVELRTYLKT KPQFQEIISSTK FT RF+LQEQ Sbjct: 381 GKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTTKPQFQEIISSTKTFTEEAEALLKEAIQEQMDRFILQEQ 506
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_SOLBU (ATP synthase subunit alpha, chloroplastic OS=Solanum bulbocastanum GN=atpA PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.711e-99 Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFN+GIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSSLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNSGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 162.925 bits (411), Expect = 1.711e-99 Identity = 88/126 (69.84%), Postives = 92/126 (73.02%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQEQ 734 GKLK SDLDKATQNQLARGQRLRELLKQ+Q+APLTVEEQIMTIYTGTNGYLDSLE+GQVRKFLVELRTYLKT KPQFQEIISSTK FT RF+LQEQ Sbjct: 381 GKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEVGQVRKFLVELRTYLKTTKPQFQEIISSTKTFTEEAEALLKEAIQEQMDRFILQEQ 506
BLAST of CK937240 vs. ExPASy Swiss-Prot
Match: ATPA_CARPA (ATP synthase subunit alpha, chloroplastic OS=Carica papaya GN=atpA PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.711e-99 Identity = 114/117 (97.44%), Postives = 114/117 (97.44%), Query Frame = 1 Query: 4 DLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLGSLLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 354 D SKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKL S LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV Sbjct: 263 DPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQV 379 HSP 2 Score: 164.466 bits (415), Expect = 1.711e-99 Identity = 90/125 (72.00%), Postives = 92/125 (73.60%), Query Frame = 3 Query: 357 GKLKXXXXXXXXXXXXXXXXSDLDKATQNQLARGQRLRELLKQAQAAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKIFTXXXXXXXXXXXXXXXXRFLLQE 731 GKLK SDLDKATQNQLARGQRLRELLKQ+Q+APLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTK FT RFLLQE Sbjct: 381 GKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKTFTEEAETILKEAIQEQMERFLLQE 505 The following BLAST results are available for this feature:
BLAST of CK937240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937240 ID=CK937240; Name=CK937240; organism=Citrus sinensis; type=EST; length=806bpback to top |