CX675277

Overview
NameCX675277
Unique NameCX675277
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5487 contig Csv1_Contig5487:771..1623. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675277 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 417.927 bits (1073), Expect = 3.522e-116
Identity = 207/262 (79.01%), Postives = 230/262 (87.79%), Query Frame = -2
Query:   73 DFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNECNLHHLILSKTANNAVMETVDPEISATCKDLGAVKKVFQLALLCSKRQPTDRPTMHEVSRVLGSLVPAPEPQKQPTSIPSALLSSAKV--PCYKDEYANLKTPHMLNCPSMSTSDAQLFLKFGEVISQNSE 852
            D++ENGSLWD+LHGPTKKK LDWDTRLKIA GAAQGLAYLHHDCSPRIIHRDVKSSNILLDKD EA LTDFGIAKSLCVSKS+TSTY+MGTIGYIDPEYARTSRLTEKSDVYS+GIVLLELLT RKAVD+E NLHHLI+SKT NN VME  DP+I++TCKDLG VKKVFQLALLC+KRQP DRPTMH+V+RVLGS + + +P       P+A  +SA +   CY DEYANLKTPH +NC SMS SDAQLFL+FG+VISQNSE
Sbjct:  722 DYLENGSLWDLLHGPTKKKTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTRRKAVDDESNLHHLIMSKTGNNEVMEMADPDITSTCKDLGVVKKVFQLALLCTKRQPNDRPTMHQVTRVLGSFMLSEQP-------PAATDTSATLAGSCYVDEYANLKTPHSVNCSSMSASDAQLFLRFGQVISQNSE 976          
BLAST of CX675277 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 6.688e-91
Identity = 172/259 (66.41%), Postives = 201/259 (77.61%), Query Frame = -2
Query:   76 DFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNECNLHHLILSKTANNAVMETVDPEISATCKDLGAVKKVFQLALLCSKRQPTDRPTMHEVSRVLGSLVPAPEPQKQPTSIPSALLSSAKVPCYKDEYANLKTPHMLNCPSMSTSDAQLFLKFGEVISQNS 852
            D+MENGSLWD+LHGP KK KLDW+TRLKIA+GAAQGLAYLHHDC+PRIIHRD+KSSNILLD +FEA L+DFGIAKS+  +K+Y STY++GTIGYIDPEYARTSRL EKSD+YSFGIVLLELLTG+KAVDNE NLH +ILSK  +N VME VD E+S TC D G +KK FQLALLC+KR P +RPTM EVSRVL SLVP+P P+K P        S AKV     E    +  H     S  T+  Q F++F E IS++S
Sbjct:  725 DYMENGSLWDLLHGPGKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGKKAVDNEANLHQMILSKADDNTVMEAVDAEVSVTCMDSGHIKKTFQLALLCTKRNPLERPTMQEVSRVLLSLVPSPPPKKLP--------SPAKV----QEGEERRESH-----SSDTTTPQWFVQFREDISKSS 966          
BLAST of CX675277 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 9.658e-90
Identity = 167/259 (64.48%), Postives = 201/259 (77.61%), Query Frame = -2
Query:   76 DFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNECNLHHLILSKTANNAVMETVDPEISATCKDLGAVKKVFQLALLCSKRQPTDRPTMHEVSRVLGSLVPAPEPQKQPTSIPSALLSSAKVPCYKDEYANLKTPHMLNCPSMSTSDAQLFLKFGEVISQNS 852
            D+MENGSLWD+LHG  KK KLDW+TRLKIA+GAAQGLAYLHHDC+PRIIHRD+KSSNILLD++FEAHL+DFGIAKS+  SK++ STY++GTIGYIDPEYARTSR+ EKSD+YSFGIVLLELLTG+KAVDNE NLH LILSK  +N VME VDPE++ TC DLG ++K FQLALLC+KR P +RPTM EVSRVL SLVP+ +  K             K+P        L+  + +  P    S  Q F++F EVIS++S
Sbjct:  722 DYMENGSLWDLLHGSLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVDNEANLHQLILSKADDNTVMEAVDPEVTVTCMDLGHIRKTFQLALLCTKRNPLERPTMLEVSRVLLSLVPSLQVAK-------------KLPSLDHSTKKLQQENEVRNPDAEAS--QWFVQFREVISKSS 965          
BLAST of CX675277 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.108e-44
Identity = 98/200 (49.00%), Postives = 134/200 (67.00%), Query Frame = -2
Query:  274 DFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNECNLHHLILSKTAN-----NAVMETVDPEISATCKD--LGAVKKVFQLALLCSKRQPTDRPTMHEVSRVL 852
            ++M  GSL ++LHG  K   +DW TR  IALGAA+GLAYLHHDC PRIIHRD+KS+NIL+D++FEAH+ DFG+AK + +  S + + + G+ GYI PEYA T ++TEK D+YSFG+VLLELLTG KA          + + T N     +   E +DP ++    D  L  +  V ++A+LC+K  P+DRPTM EV  +L
Sbjct:  902 EYMSRGSLGELLHGG-KSHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTG-KAPVQPLEQGGDLATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVLML 1099          
BLAST of CX675277 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.366e-42
Identity = 91/207 (43.96%), Postives = 134/207 (64.73%), Query Frame = -2
Query:  247 DFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGR-----KAVDNECNLHHLILSKTANNAVMETVDPEISATCKDLGAVKKVFQLALLCSKRQPTDRPTMHEVSRVLGSLVPAPEP 852
            D++  GSL + LH   + ++LDWD+R+ I +GAA+GLAYLHHDCSPRIIHRD+KSSNILLD + EA ++DFG+AK L   +S+ +T + GT GY+ PEY ++ R TEK+DVYSFG+++LE+L+G+       ++   N+   +    + N   E VD  +S    +  ++  +  +A  C    P +RPTMH V ++L S V  P P
Sbjct:  378 DYLPGGSLDEALH--KRGEQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVD--LSCEGVERESLDALLSIATKCVSSSPDERPTMHRVVQLLESEVMTPCP 580          
BLAST of CX675277 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.741e-42
Identity = 89/209 (42.58%), Postives = 133/209 (63.64%), Query Frame = -2
Query:  241 DFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVD-----NECNLHHLILSKTANNAVMETVDPEISATCKDLGAVKKVFQLALLCSKRQPTDRPTMHEVSRVLGSLVPAPEPQK 852
            D++  GSL + LH   + ++LDWD+R+ I +GAA+GL+YLHHDCSPRIIHRD+KSSNILLD + EA ++DFG+AK L   +S+ +T + GT GY+ PEY ++ R TEK+DVYSFG+++LE+L+G++  D        N+   +    +     + VDP        + ++  +  +A  C    P +RPTMH V ++L S V  P P +
Sbjct:  380 DYLPGGSLDEALH--ERGEQLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDPNCEG--MQMESLDALLSIATQCVSPSPEERPTMHRVVQLLESEVMTPCPSE 584          
BLAST of CX675277 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 1.279e-41
Identity = 97/204 (47.55%), Postives = 130/204 (63.73%), Query Frame = -2
Query:  274 DFMENGSLWDILHGPTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLC-VSKSYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDN----------ECNLHHLILSKTANNAVMETVDPEISATCKDLGAVKKVFQLALLCSKRQPTDRPTMHEVSRVL 852
            ++M NGSL ++LHG +K   L W+TR ++A+ AA+GL YLHHDCSP I+HRDVKS+NILLD DFEAH+ DFG+AK L   + S   + I G+ GYI PEYA T ++ EKSDVYSFG+VLLEL+ G+K V              N    I   +    V+  VDP +  T   L +V  VF++A++C + +   RPTM EV  +L
Sbjct:  767 EYMPNGSLGELLHG-SKGGHLQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRL--TGYPLTSVIHVFKIAMMCVEEEAAARPTMREVVHML 967          
BLAST of CX675277 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.722e-41
Identity = 89/207 (43.00%), Postives = 133/207 (64.25%), Query Frame = -2
Query:  259 DFMENGSLWDILHG--PTKKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNECNLHHLILS------KTANNAVMETVDPEISATCKDL-GAVKKVFQLALLCSKRQPTDRPTMHEVSRVLGSLVP 852
            ++M NGSL D+LHG   T     +W    +IA+G AQG+ YLHHDC P I+HRD+K SNILLD DFEA + DFG+AK +   +S   + + G+ GYI PEYA T ++ +KSD+YS+G++LLE++TG+++V+ E    + I+       KT  + V E +D  +  +C  +   +K++ ++ALLC+ R PTDRP M +V  +L    P
Sbjct:  799 EYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDES--MSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEGNSIVDWVRSKLKTKED-VEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQEAKP 1002          
BLAST of CX675277 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.860e-41
Identity = 99/225 (44.00%), Postives = 134/225 (59.56%), Query Frame = -2
Query:  208 DFMENGSLWDILHGPTKKKK-LDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSLCVSKSYT---STYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDNEC---NLHHLILSKTANNAVMETVDPEISATCKDLGAVKKVFQLALLCSKRQPTDRPTMHEVSRVL---GSLVPAPEPQKQPTSIPSALLS 852
            ++M NGSL D+LHG  K    L W  RL+IAL AA+GL+YLHHDC P I+HRDVKSSNILLD D+ A + DFGIAK   +S S T    + I G+ GYI PEY  T R+ EKSD+YSFG+VLLEL+TG++  D+E    ++   + +      +   +DP++    K+   + KV  + LLC+   P +RP+M +V  +L      VP   P     S     LS
Sbjct:  767 EYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGDKDMAKWVCTALDKCGLEPVIDPKLDLKFKE--EISKVIHIGLLCTSPLPLNRPSMRKVVIMLQEVSGAVPCSSPNTSKRSKTGGKLS 989          
BLAST of CX675277 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.083e-40
Identity = 89/203 (43.84%), Postives = 133/203 (65.52%), Query Frame = -2
Query:  289 DFMENGSLWDILHGPT-----KKKKLDWDTRLKIALGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDFEAHLTDFGIAKSL---CVSKSYTSTYIMGTIGYIDPEYARTSRLTEKSDVYSFGIVLLELLTGRKAVDN----ECNLHHLILS--KTANNAVMETVDPEISATCK-DLGAVKKVFQLALLCSKRQPTDRPTMHE 852
            ++M+NGS+WD LH        KKK LDW+ RL+IA+G AQG+ YLHHDC P I+HRD+KSSN+LLD + EAHL DFG+AK L   C + + ++T+   + GYI PEYA + + TEKSDVYS GIVL+E++TG+   D+    E ++   + +  + A +A  + +DP++      +  A  +V ++AL C+K  P +RP+  +
Sbjct: 1028 EYMKNGSIWDWLHEDKPVLEKKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVFGAEMDMVRWVETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCTKTSPQERPSSRQ 1230          
The following BLAST results are available for this feature:
BLAST of CX675277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ERECT_ARATH3.522e-11679.01LRR receptor-like serine/threonine-protein kinase ... [more]
ERL2_ARATH6.688e-9166.41LRR receptor-like serine/threonine-protein kinase ... [more]
ERL1_ARATH9.658e-9064.48LRR receptor-like serine/threonine-protein kinase ... [more]
Y2317_ARATH2.108e-4449.00Probable leucine-rich repeat receptor-like protein... [more]
FEI2_ARATH3.366e-4243.96LRR receptor-like serine/threonine-protein kinase ... [more]
FEI1_ARATH5.741e-4242.58LRR receptor-like serine/threonine-protein kinase ... [more]
CLV1_ARATH1.279e-4147.55Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y5148_ARATH3.722e-4143.00Probable leucine-rich repeat receptor-like protein... [more]
RLK5_ARATH4.860e-4144.00Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
GSO1_ARATH1.083e-4043.84LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_61B07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-61B07-D13-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675277 ID=CX675277; Name=CX675277; organism=Citrus sinensis; type=EST; length=853bp
CTGGCGTCCCAAATCTTATGAACAATATTCCCCATTAAATGACATCTTCC
ACTAACATCCTTCTTACCTTCACTCACTGTTCTGAGATATTACTTCCCCA
AACTTGAGGAAAAGTTGAGCATCTGAGGTGCTCATTGATGGACAGTTCAG
CATGTGTGGAGTCTTTAGATTTGCATACTCATCCTTGTAGCAAGGTACTT
TGGCTGATGACAGTAGGGCAGATGGGATTGAAGTTGGTTGTTTTTGTGGT
TCAGGAGCAGGAACAAGACTTCCAAGAACACGACTAACTTCATGCATGGT
AGGCCTGTCTGTTGGTTGCCTCTTTGAGCATAGAAGGGCTAGCTGAAATA
CTTTCTTCACTGCTCCAAGATCCTTGCAAGTTGCACTGATCTCAGGATCA
ACTGTTTCCATGACAGCATTGTTGGCTGTCTTCGATAAAATCAGGTGATG
AAGATTGCATTCGTTATCCACAGCTTTTCTTCCAGTAAGCAACTCAAGTA
GAACAATCCCAAAGCTGTACACATCAGATTTCTCAGTCAGGCGAGAAGTT
CGGGCATATTCAGGGTCTATGTAACCAATGGTTCCCATGATGTAAGTAGA
TGTATACGACTTGGACACACATAAACTTTTGGCAATTCCAAAATCTGTGA
GATGGGCTTCAAAATCCTTGTCCAATAGAATATTAGAGGACTTCACATCC
CGGTGGATGATTCGAGGACTACAATCATGGTGTAAATACGCTAGCCCTTG
TGCAGCTCCTAGTGCTATTTTCAGTCGAGTGTCCCAGTCAAGCTTTTTCT
TCTTTGTTGGACCATGAAGAATATCCCAAAGACTACCATTTTCCATAAAA
TCA
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