CK937237

Overview
NameCK937237
Unique NameCK937237
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.388e-66
Identity = 128/178 (71.91%), Postives = 141/178 (79.21%), Query Frame = 3
Query:   78 MGCFPCFDSREDEKLNPEKEPD--DQKQGQPTVSNNISRLPSGRDRLRSRSNGVSKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHLHDLPP 605
            MGCF CFDS +DEKLNP  E +   +KQ QPTVSNNIS LPSG ++L S++NG SKREL LP+DG G  IAA TF FRELAAAT NF P++F+GEGGFGRVYKG L+STGQVVAVKQLDRNGLQGNREFLVE               IGYCADGDQRLL+YEFMPLGSLEDHLHDLPP
Sbjct:    1 MGCFSCFDSSDDEKLNPVDESNHGQKKQSQPTVSNNISGLPSGGEKLSSKTNGGSKRELLLPRDGLG-QIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPP 177          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.413e-34
Identity = 86/196 (43.88%), Postives = 115/196 (58.67%), Query Frame = 3
Query:   78 MGCFPCF-------DSREDEKLNPE-------KEPDDQKQGQPTVSNNISRLPSGRDRLRSRSNGVSKRELHLPKDGAGVNI-------AAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHLHDLP 602
            MGCF C        ++ +D  +N +           D++  Q   S++ +++   RD   +   GV K +  L  D  G+N+        AQTFTF+ELA AT NFR + F+GEGGFG+V+KG +E   QVVA+KQLDRNG+QG REF+VE               IG+CA+GDQRLL+YE+MP GSLEDHLH LP
Sbjct:    1 MGCFGCSKKSSKRSETNKDTVINRKIVGGTTSVAKSDKRDDQTQPSSDSTKVSPYRDV--NNEGGVGKED-QLSLDVKGLNLNDQVTGKKAQTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLP 193          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.015e-24
Identity = 61/138 (44.20%), Postives = 85/138 (61.59%), Query Frame = 3
Query:  204 DRLRSRSNGVSKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLES---------TGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHL 590
            D L S+S+ VS R     +     +   ++FTF EL AAT+NFRP+S +GEGGFG V+KGW++          TG V+AVK+L+++G QG++E+L E               IGYC + + RLL+YEFMP GSLE+HL
Sbjct:   27 DSLGSKSSSVSIRTNPRTEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHL 164          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.580e-24
Identity = 54/110 (49.09%), Postives = 70/110 (63.64%), Query Frame = 3
Query:  288 QTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLEST---------GQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHL 590
            + FTF EL  AT+NFRP+S +GEGGFG V+KGW++ T         G VVAVK+L   G QG++E+L E               +GYC +G+ RLL+YEFMP GSLE+HL
Sbjct:   69 KAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHL 178          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.593e-24
Identity = 55/110 (50.00%), Postives = 70/110 (63.64%), Query Frame = 3
Query:  288 QTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLEST---------GQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHL 590
            + FTF EL  ATKNFR ++ +GEGGFG V+KGW++ T         G VVAVKQL   G QG++E+L E               +GYCA+G+ RLL+YEFMP GSLE+HL
Sbjct:   72 KAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHL 181          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.466e-23
Identity = 55/110 (50.00%), Postives = 71/110 (64.55%), Query Frame = 3
Query:  288 QTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLES---------TGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHL 590
            ++FTF EL  AT+NFRP+S IGEGGFG V+KGWL+          TG V+AVK+L++ G QG+RE+L E               IGYC + + RLL+YEFM  GSLE+HL
Sbjct:   53 KSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHL 162          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.265e-23
Identity = 52/110 (47.27%), Postives = 74/110 (67.27%), Query Frame = 3
Query:  288 QTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLES---------TGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHL 590
            ++F+F EL +AT+NFRP+S +GEGGFG V+KGW++          TG V+AVK+L+++G QG++E+L E               IGYC + + RLL+YEFMP GSLE+HL
Sbjct:   54 KSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHL 163          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.117e-22
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 3
Query:  171 SNNISRLPSGRDRLR-SRSNGVSKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLEST---------GQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHL 590
            S  +++  SG D L  S     S    H  +     +   ++F+F EL  AT+NFR +S +GEGGFG V++GWL+ T         G V+AVK+L+ +G QG+RE+L E               IGYC + +QRLL+YEFM  GSLE+HL
Sbjct:    7 SRVLNKSSSGLDDLHLSSCKSSSSATAHKTEGEILSSTTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHL 156          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 4.715e-22
Identity = 52/114 (45.61%), Postives = 71/114 (62.28%), Query Frame = 3
Query:  276 NIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLES---------TGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHL 590
            N   + F+  EL +AT+NFRP+S +GEGGFG V+KGW++          TG V+AVK+L++ G QG+RE+L E               IGYC + + RLL+YEFM  GSLE+HL
Sbjct:   50 NANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHL 163          
BLAST of CK937237 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 6.373e-19
Identity = 44/110 (40.00%), Postives = 66/110 (60.00%), Query Frame = 3
Query:  288 QTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLEST---------GQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLIYEFMPLGSLEDHL 590
            + + F +L  ATKNF+P+S +G+GGFG+VY+GW+++T         G +VA+K+L+   +QG  E+  E               +GYC +  + LL+YEFMP GSLE HL
Sbjct:   72 KVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHL 181          
The following BLAST results are available for this feature:
BLAST of CK937237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PBS1_ARATH2.388e-6671.91Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
RLCK7_ARATH1.413e-3443.88Probable serine/threonine-protein kinase RLCKVII O... [more]
APK1B_ARATH1.015e-2444.20Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
APK2B_ARATH6.580e-2449.09Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
APK2A_ARATH8.593e-2450.00Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
BIK1_ARATH1.466e-2350.00Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
APK1A_ARATH4.265e-2347.27Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y3545_ARATH2.117e-2240.00Probable receptor-like protein kinase At3g55450 OS... [more]
NAK_ARATH4.715e-2245.61Probable serine/threonine-protein kinase NAK OS=Ar... [more]
CX32_ARATH6.373e-1940.00Probable serine/threonine-protein kinase Cx32, chl... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004512_F04 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IIIF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937237 ID=CK937237; Name=CK937237; organism=Citrus sinensis; type=EST; length=605bp
TTTTTTTTTTATAAGGATTTGAAAGATTTGATTTTTATTTTTTTTCCCTT
TTTGTGTGGCGGGTTTGATTTCGGGAGATGGGTTGTTTTCCTTGTTTTGA
TTCGAGGGAAGATGAGAAGTTGAATCCAGAGAAAGAACCCGATGATCAAA
AGCAAGGACAACCAACGGTCTCCAATAACATTTCCAGATTGCCTTCTGGA
AGAGACAGACTTAGATCAAGAAGTAATGGAGTCTCGAAAAGGGAATTGCA
CCTTCCCAAAGATGGGGCTGGTGTCAATATTGCTGCTCAAACATTTACAT
TTCGTGAGCTTGCTGCTGCAACAAAGAATTTTAGACCAGAGAGTTTCATA
GGGGAAGGAGGATTTGGACGTGTGTACAAGGGGTGGCTTGAGAGCACTGG
TCAGGTCGTTGCTGTCAAGCAATTGGATAGAAATGGCCTTCAGGGTAATA
GGGAGTTTCTTGTGGAGGTCCTCATGCTTAGCCTTCTTCATCACTCTAAC
CTAGTGAACTTGATTGGATATTGTGCTGATGGGGACCAACGGCTTCTTAT
CTACGAATTTATGCCTTTGGGATCCTTGGAAGATCACCTTCATGATTTAC
CACCT
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