CK937172

Overview
NameCK937172
Unique NameCK937172
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.722e-53
Identity = 112/228 (49.12%), Postives = 154/228 (67.54%), Query Frame = 3
Query:    6 EVSASPAKVIQNAGKDSTRRSANYHPSIWGDHFLQYTCDTQETDDGSNVKHLELKKEIRRMLKADNKPS-RTLQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLCDNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQ 686
            +VS  P+    ++ KD  R  A++ PSIWGD FL   C  +  D G+  +H +LK+E+R+M+ A    S + L  ID++QRLGVSYHF  EI++ L  ++  + D+     END LY  SL FRLLR++GY +S DVF KFKD  GNFK+S+  DV+G+L LY+A++L VH EDILDEA++FTT+HL S+A   +  PL E+V HAL Q I RGL R+EAR Y+ +YQ
Sbjct:    4 QVSQMPSSSPLSSNKDEIRPKADFQPSIWGDFFLN--CPDKNIDAGTEKRHQQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHNNNDA-----END-LYTTSLRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVQGLLELYQASYLRVHGEDILDEAISFTTNHL-SLAVSSLDHPLSEEVSHALKQSIRRGLPRVEARHYLSVYQ 222          
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.248e-52
Identity = 111/228 (48.68%), Postives = 152/228 (66.67%), Query Frame = 3
Query:    6 EVSASPAKVIQNAGKDSTRRSANYHPSIWGDHFLQYTCDTQETDDGSNVKHLELKKEIRRMLKADNKPS-RTLQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLCDNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQ 686
            +VS  P+    ++ KD  R  A++ PSIWGD FL   C  +  D  +  +H +LK+E+R+M+ A    S + L  ID++QRLGVSYHF  EI++ L  ++  + D+     END LY  S+ FRLLR++GY +S DVF KFKD  GNFK+S+  DVRG+L LY+A++L VH EDILDEA++FTT HL S+A   +  PL E+V HAL Q I RGL R+EAR Y+ +YQ
Sbjct:    4 QVSQMPSSSPLSSNKDEMRPKADFQPSIWGDLFLN--CPDKNIDAETEKRHQQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHNNNDA-----END-LYTTSIRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTHHL-SLAVASLDHPLSEEVSHALKQSIRRGLPRVEARHYLSVYQ 222          
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52
Identity = 111/228 (48.68%), Postives = 153/228 (67.11%), Query Frame = 3
Query:    6 EVSASPAKVIQNAGKDSTRRSANYHPSIWGDHFLQYTCDTQETDDGSNVKHLELKKEIRRMLKADNKPS-RTLQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLCDNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQ 686
            +VS  P+    ++ KD  R  A++ PSIWGD FL   C  +  D  +  +H +LK+E+R+M+ A    S + L  ID++QRLGVSYHF  EI++ L  ++  + D+     END LY  SL FRLLR++G+ +S DVF KFKD  GNFK+S+  DVRG+L LY+A++L VH EDILDEA++FTT+HL S+A   +  PL E+V HAL Q I RGL R+EAR Y+ +YQ
Sbjct:    4 QVSQMPSSSPLSSNKDEMRPKADFQPSIWGDLFLN--CPDKNIDAETEKRHQQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHNNNDA-----END-LYTTSLRFRLLREHGFNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTNHL-SLAVASLDYPLSEEVSHALKQSIRRGLPRVEARHYLSVYQ 222          
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.001e-51
Identity = 109/228 (47.81%), Postives = 151/228 (66.23%), Query Frame = 3
Query:    6 EVSASPAKVIQNAGKDSTRRSANYHPSIWGDHFLQYTCDTQETDDGSNVKHLELKKEIRRMLKADNKPSRT-LQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLCDNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQ 686
            +VS  P+    ++ KD  R  A++ PSIWGD FL   C  +  D  +  +H +LK+E+R+M+ A    S   L  ID++Q LGVSYHF  EI++ L  ++  + D+     END LY  SL FRLLR++G+ +S DVF KFKD  GNFK+S+  DVRG+L LY+A++L VH EDILDEA++FT++HL S+A   +  PL E+V HAL Q I RGL R+EAR Y+ +YQ
Sbjct:    4 QVSQMPSSSPLSSNKDEMRPKADFQPSIWGDFFLN--CPDKNIDAETQKRHQQLKEEVRKMIVAPMANSTLKLAFIDSVQGLGVSYHFTKEIEDELENIYHNNNDA-----END-LYTTSLRFRLLREHGFHVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTSNHL-SLAVASLDHPLSEEVSHALKQSIRRGLPRVEARHYLSVYQ 222          
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.668e-48
Identity = 105/228 (46.05%), Postives = 150/228 (65.79%), Query Frame = 3
Query:    6 EVSASPAKVIQNAGKDSTRRSANYHPSIWGDHFLQYTCDTQETDDGSNVKHLELKKEIRRMLKAD-NKPSRTLQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLCDNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQ 686
            +V ASP   I +      R  A++HP IWGD F+   C   + D  + +++ ELK ++R+M+    +  ++ L  IDA+QRLGVSYHFE EI++ L  +++ + ++D     + +LY  +L FRLLR++G+ IS D F KFKD  GNFK SL  DV+G+L LYEA+++ VH EDILDEA++FTT+ L ++A   +  PL EQV HAL Q I RGL R+EAR +I IYQ
Sbjct:    7 QVLASPHPAISS----ENRPKADFHPGIWGDMFI--ICPDTDIDAATELQYEELKAQVRKMIMEPVDDSNQKLPFIDAVQRLGVSYHFEKEIEDELENIYRDTNNNDA----DTDLYTTALRFRLLREHGFDISCDAFNKFKDEAGNFKASLTSDVQGLLELYEASYMRVHGEDILDEAISFTTAQL-TLALPTLHHPLSEQVGHALKQSIRRGLPRVEARNFISIYQ 223          
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: 5EAS_TOBAC (Aristolochene synthase OS=Nicotiana tabacum GN=EAS3 PE=1 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 2.664e-46
Identity = 102/217 (47.00%), Postives = 147/217 (67.74%), Query Frame = 3
Query:   33 IQNAGKDSTRRSANYHPSIWGDHFLQYTCDTQETDDGSNVKHLE-LKKEIRRMLKADN-KPSRTLQLIDAIQRLGVSYHFESEIDEILGKMHKASQD-SDLCDNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYI 674
            + N  ++  R  A++ PS+WGD FL ++   Q  +     K +E LK++ R ML A   K + TL LID I+RLG+SYHFE EID+IL +++  + + +DLC +        +L FRLLRQ+G+ IS ++F KF+D +G FK SLA DV G+L+LYEA+H+  H +DIL++ALAF+T HLES A H ++SPL EQV HAL Q +H+G+ R+E R +I
Sbjct:    6 VANYEEEIVRPVADFSPSLWGDQFLSFSIKNQVAE--KYAKEIEALKEQTRNMLLATGMKLADTLNLIDTIERLGISYHFEKEIDDILDQIYNQNSNCNDLCTS--------ALQFRLLRQHGFNISPEIFSKFQDENGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLESAAPH-LKSPLREQVTHALEQCLHKGVPRVETRFFI 211          
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.787e-42
Identity = 93/210 (44.29%), Postives = 139/210 (66.19%), Query Frame = 3
Query:   60 RRSANYHPSIWGDHFLQYTCDTQETDDGSNVKHLELKKEIRRMLKADNKPS-RTLQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLCDNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQ 686
            R  A + P++WG+ F   T +  E +     + + LKK+++ +L +    S  T+ LID + RLGVSYHFE++I+E+L K+  +  D  L D +  +LY  ++ FR+ RQ+G+K+S+DVF KFKD+DG FK SL  D +GMLSL+EA+HL VH EDIL+EA AFT  +L+S A  ++   L   + +AL QP H G+ RLEAR++I +Y+
Sbjct:   64 RPLAYFPPTVWGNRFASLTFNPSEFESYDE-RVIVLKKKVKDILISSTSDSVETVILIDLLCRLGVSYHFENDIEELLSKIFNSQPD--LVDEKECDLYTAAIVFRVFRQHGFKMSSDVFSKFKDSDGKFKESLRGDAKGMLSLFEASHLSVHGEDILEEAFAFTKDYLQSSAV-ELFPNLKRHITNALEQPFHSGVPRLEARKFIDLYE 269          
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: ECS1_ARTAN (Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.415e-39
Identity = 93/217 (42.86%), Postives = 133/217 (61.29%), Query Frame = 3
Query:   48 KDSTRRSANYHPSIWGDHFLQYTCDTQETDDGSNVKHL--ELKKEIRRMLKADNKPSRTLQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLCDNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESIATHQ--IRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQ 686
            +D  R +AN+   IWGD FL Y  D QE  +   +K L  E+K E+   L +  + +  L+ IDAI+RLG++Y+FE EI+++   M+ A  D     N        SL FRL+RQ+G+ +S+D+F  +KD +G FK SL KDV G+L LYEA ++ V  E ILD+AL FT + L+ IA +     S +  Q++ AL QP+H+ L RLEA +YIP YQ
Sbjct:    6 EDVIRPNANFPSEIWGDQFLAYDQDEQEGVE-QVIKDLKEEVKSELLTALNSPTQHTELLKFIDAIERLGIAYYFEEEINQVFQHMYTAYGDKWTGGNT-------SLWFRLMRQHGFFVSSDIFSTYKDKEGRFKESLEKDVHGLLELYEAAYMFVPGEGILDDALVFTRTCLDEIAKNPSLSNSAVSSQIREALTQPLHKRLPRLEALRYIPFYQ 214          
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 9.176e-39
Identity = 90/216 (41.67%), Postives = 127/216 (58.80%), Query Frame = 3
Query:   45 GKDSTRRSANYHPSIWGDHFLQYTCDTQETDDGSNVKHLELKKEIRR-MLKADNKPSRTLQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLCDNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESIATHQIRSP-LVEQVKHALVQPIHRGLQRLEARQYIPIYQ 686
            G +  R  A++  +IW D    ++     T+     KH  LK+ ++   + +   P   ++ IDA+ RLGVSYHFE +I E L K         +   E  +LY + + F++ RQ G+K+SADVF+KFKD +G FK  L  D  GMLSLYEA   G H EDI+DEALAF+ SHLE I++    SP L  ++K+AL  P H+G+ R+E RQYI  Y+
Sbjct:    2 GSEVNRPLADFPANIWEDPLTSFSKSDLGTETFKE-KHSTLKEAVKEAFMSSKANPIENIKFIDALCRLGVSYHFEKDIVEQLDKSFDCLDFPQMVRQEGCDLYTVGIIFQVFRQFGFKLSADVFEKFKDENGKFKGHLVTDAYGMLSLYEAAQWGTHGEDIIDEALAFSRSHLEEISSRS--SPHLAIRIKNALKHPYHKGISRIETRQYISYYE 214          
BLAST of CK937172 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.044e-38
Identity = 95/220 (43.18%), Postives = 124/220 (56.36%), Query Frame = 3
Query:   51 DSTRRSANYHPSIWGDHFLQY--------TCDTQETDDGSNVKHLELKKEIRRMLKADNKPSRTLQLIDAIQRLGVSYHFESEIDEILGKMHKASQDSDLCDNENDELYYISLHFRLLRQNGYKISADVFKKFKDTDGNFKTSLAKDVRGMLSLYEATHLGVHEEDILDEALAFTTSHLESIATHQIRSPLVEQVKHALVQPIHRGLQRLEARQYIPIYQ 686
            D  RRSANY PSIW   +++         TC  Q      NV    LK+++R ML     P   L+LI+ +QRLG+SYHFE EI  IL  ++      D    EN  LY  +L FRLLRQ+GY +S +VF  FKD  G+FK  L +D +GMLSLYEA+   +  E+IL+EA  F+T HLE          L   V H+L  P+H  + RLEAR +I IY+
Sbjct:   54 DILRRSANYQPSIWNHDYIESLRIEYVGETCTRQ-----INV----LKEQVRMMLHKVVNPLEQLELIEILQRLGLSYHFEEEIKRILDGVYNNDHGGDTWKAEN--LYATALKFRLLRQHGYSVSQEVFNSFKDERGSFKACLCEDTKGMLSLYEASFFLIEGENILEEARDFSTKHLEEYVKQNKEKNLATLVNHSLEFPLHWRMPRLEARWFINIYR 262          
The following BLAST results are available for this feature:
BLAST of CK937172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
DCS4_GOSAR1.722e-5349.12(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
DCS1_GOSAR3.248e-5248.68(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
DCS2_GOSAR4.243e-5248.68(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
DCS1_GOSHI8.001e-5147.81(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
DCS3_GOSAR1.668e-4846.05(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
5EAS_TOBAC2.664e-4647.00Aristolochene synthase OS=Nicotiana tabacum GN=EAS... [more]
CASS_RICCO1.787e-4244.29Casbene synthase, chloroplastic OS=Ricinus communi... [more]
ECS1_ARTAN2.415e-3942.86Epi-cedrol synthase OS=Artemisia annua GN=ECS1 PE=... [more]
HUMS_ARATH9.176e-3941.67Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... [more]
MYRS_QUEIL2.044e-3843.18Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004513_E02 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IVF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937172 ID=CK937172; Name=CK937172; organism=Citrus sinensis; type=EST; length=687bp
CTTTGGAAGTATCAGCCTCTCCTGCTAAAGTTATCCAAAATGCTGGGAAA
GATTCTACTCGTCGCTCTGCAAATTATCATCCAAGCATCTGGGGGGATCA
TTTCCTTCAATATACTTGTGACACCCAGGAAACTGATGATGGCAGCAATG
TAAAGCATCTAGAGCTGAAGAAAGAAATTAGAAGAATGCTAAAAGCTGAT
AACAAGCCTTCACGTACACTTCAATTGATTGATGCAATTCAGCGTTTAGG
AGTGTCTTACCATTTTGAAAGTGAGATTGATGAAATATTGGGAAAGATGC
ATAAGGCTTCCCAAGACTCTGATCTTTGTGATAATGAAAATGATGAGCTC
TATTATATCTCTCTTCATTTTCGATTACTTAGACAAAATGGCTATAAAAT
TTCCGCTGATGTGTTCAAAAAGTTCAAAGACACGGATGGGAACTTTAAAA
CATCTCTTGCGAAAGATGTTCGAGGAATGTTAAGCTTGTATGAAGCTACG
CATCTCGGGGTACATGAAGAAGATATACTAGATGAAGCGCTTGCTTTCAC
CACTAGTCACCTAGAGTCAATAGCGACTCATCAAATCAGGTCTCCACTTG
TTGAACAAGTCAAACATGCCTTAGTTCAGCCTATCCACAGGGGCTTACAA
AGGCTTGAGGCAAGACAGTACATTCCTATCTATCAAG
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