CK937155

Overview
NameCK937155
Unique NameCK937155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK937155 vs. ExPASy Swiss-Prot
Match: USPAL_ARATH (Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13
Identity = 48/161 (29.81%), Postives = 81/161 (50.31%), Query Frame = 3 
Query:  132 KILVAVDEGEESMY---------TLTWCLTNVISPNSKD-TLILLHAQAPRAAYTALDGTGYLF-STDIMSTMDKYHNDAADRLIEKAKNMCKDHVNDVKVETRVESGDPRDVICEMVQKLGVDVLVMGSHGYGWFKRAFLGSVSNHCAQNVKCPVLIVKK 581
            K++VAV+      Y            W L  ++  N+ D  ++LLH Q         D    ++ S +    M + +      L+E   N C  H   V  E  +++GDP+DVIC+ V+++  D LV+GS G G F++ F+G+VS  C ++ +CPV+ +K+
Sbjct:    7 KVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQV--VDEDGFDDVDSIYASPEDFRDMRQSNKAKGLHLLEFFVNKC--HEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIKR 163
The following BLAST results are available for this feature:
BLAST of CK937155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
USPAL_ARATH6.059e-1329.81Universal stress protein A-like protein OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004513_E09 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937155 ID=CK937155; Name=CK937155; organism=Citrus sinensis; type=EST; length=758bp
GGGGGATCTCACATCATCCGAAAAATCGCAAGCTAAAAGTGTCAAACTCT
TCTTCTTAAGTTTCAACTAGTTTCAGCCTTTTGATCAGAGCAGAGATCAT
GTCAGTTGGTGACGCGGCGGCAAAAGAGAGGAAGATCCTCGTGGCAGTTG
ATGAGGGTGAGGAGAGCATGTATACTCTCACCTGGTGTCTCACAAATGTG
ATTTCTCCAAATTCCAAGGATACCCTCATCCTGCTCCATGCTCAGGCCCC
CAGAGCTGCTTACACTGCTTTGGATGGCACAGGGTATTTGTTTTCAACTG
ATATCATGTCAACGATGGACAAGTACCATAACGACGCTGCTGACCGTCTG
ATCGAGAAGGCCAAGAATATGTGTAAAGATCATGTTAACGATGTTAAGGT
GGAGACGAGAGTTGAGTCCGGTGATCCAAGGGACGTGATTTGCGAGATGG
TACAGAAGCTGGGTGTGGACGTGTTAGTCATGGGTAGCCATGGCTACGGT
TGGTTCAAAAGGGCCTTCTTGGGGAGTGTGAGCAATCATTGTGCACAAAA
TGTGAAGTGTCCCGTCTTGATCGTTAAGAAGCCCAAATCCAACAATCTTG
GAAAGTAAATAATCTGCTTTTGTTCTTGAAAATTTATGTTGTGTATTGTA
TGATATAACTTCAAGATTTTTCCCTTTTTGTTGCAGTGTAAATGTGTGTA
CGTACAAATAAAATCTATCGACTATGAGAAGTTTGTTTGTGAAAAAAAAA
AAAAAAAA
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