CK937154

Overview
NameCK937154
Unique NameCK937154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: ZB14_MAIZE (14 kDa zinc-binding protein OS=Zea mays GN=ZBP14 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.739e-54
Identity = 101/115 (87.83%), Postives = 108/115 (93.91%), Query Frame = 3
Query:   30 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 374
            DSPTIFDKII KEIPS VVYED+KVLAFRDI PQAPTHILIIPKVKDGLTGL+KAEERH EILG LLY AK+VAKQEGLEDG+R+VINDGP+G QSV+HIHVHLLGGRQMNWPPG
Sbjct:   14 DSPTIFDKIIKKEIPSTVVYEDEKVLAFRDINPQAPTHILIIPKVKDGLTGLAKAEERHIEILGYLLYVAKVVAKQEGLEDGYRVVINDGPSGCQSVYHIHVHLLGGRQMNWPPG 128          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: ZB14_BRAJU (14 kDa zinc-binding protein (Fragment) OS=Brassica juncea PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.077e-50
Identity = 95/112 (84.82%), Postives = 103/112 (91.96%), Query Frame = 3
Query:   39 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 374
            TIF KII+KEIPS VVYEDDKVLAFRDI PQ P HIL+IPKV+DGLTGL KAEERH +ILGRLLYTAKLVAKQEGL++GFRIVINDGP G QSV+HIHVHL+GGRQMNWPPG
Sbjct:    2 TIFGKIISKEIPSTVVYEDDKVLAFRDITPQGPVHILLIPKVRDGLTGLFKAEERHIDILGRLLYTAKLVAKQEGLDEGFRIVINDGPQGCQSVYHIHVHLIGGRQMNWPPG 113          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: Y1390_SYNE7 (Uncharacterized HIT-like protein Synpcc7942_1390 OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_1390 PE=4 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.665e-33
Identity = 66/112 (58.93%), Postives = 82/112 (73.21%), Query Frame = 3
Query:   39 TIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 374
            TIF KII +EIP+ +VYEDD  LAFRD+ PQAP HIL+IPK    +  L +A   H  +LG LL T K +A QEGL +G+R VIN GP GGQ+V+H+H+HLLGGR + WPPG
Sbjct:    5 TIFGKIIRREIPADIVYEDDLCLAFRDVAPQAPVHILVIPK--QPIANLLEATAEHQALLGHLLLTVKAIAAQEGLTEGYRTVINTGPAGGQTVYHLHIHLLGGRSLAWPPG 114          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: HINT2_BOVIN (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Bos taurus GN=HINT2 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.546e-33
Identity = 65/124 (52.42%), Postives = 90/124 (72.58%), Query Frame = 3
Query:    3 EAAAAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 374
            +A  AA    +PTIF +I+++ +P+ ++YED + LAFRD+ PQAP H L+IPK    +  +S+AEE   ++LG LL  AK  AK EGL DG+R+VINDG  G QSV+H+H+H+LGGRQ+ WPPG
Sbjct:   42 KAQQAAPGGAAPTIFSRILDRSLPADILYEDQQCLAFRDVAPQAPVHFLVIPKKP--IPRISQAEEEDQQLLGHLLLVAKETAKAEGLGDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWPPG 163          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: HINT1_BOVIN (Histidine triad nucleotide-binding protein 1 OS=Bos taurus GN=HINT1 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.013e-32
Identity = 66/123 (53.66%), Postives = 87/123 (70.73%), Query Frame = 3
Query:    6 AAAAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 374
            A A        TIF KII KEIP+K++YEDD+ LAF DI PQAPTH L+IPK    ++ +S AE+    +LG L+   K  A   GL+ G+R+V+N+G +GGQSV+H+H+H+LGGRQMNWPPG
Sbjct:    6 AKAQVARPGGDTIFGKIIRKEIPAKIIYEDDQCLAFHDISPQAPTHFLVIPKKY--ISQISAAEDDDESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: HINT2_HUMAN (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Homo sapiens GN=HINT2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.323e-32
Identity = 64/124 (51.61%), Postives = 88/124 (70.97%), Query Frame = 3
Query:    3 EAAAAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 374
            +A  A     +PTIF +I++K +P+ ++YED + L FRD+ PQAP H L+IPK    +  +S+AEE   ++LG LL  AK  AK EGL DG+R+VINDG  G QSV+H+H+H+LGGRQ+ WPPG
Sbjct:   42 KAQQATPGGAAPTIFSRILDKSLPADILYEDQQCLVFRDVAPQAPVHFLVIPKKP--IPRISQAEEEDQQLLGHLLLVAKQTAKAEGLGDGYRLVINDGKLGAQSVYHLHIHVLGGRQLQWPPG 163          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: HINT1_RABIT (Histidine triad nucleotide-binding protein 1 OS=Oryctolagus cuniculus GN=HINT1 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.728e-32
Identity = 65/123 (52.85%), Postives = 87/123 (70.73%), Query Frame = 3
Query:    6 AAAAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 374
            A A        TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK    ++ +S AE+    +LG L+   K  A   GL+ G+R+V+N+G +GGQSV+H+H+H+LGGRQMNWPPG
Sbjct:    6 AKAQVARPGGDTIFGKIIRKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKKH--ISQISAAEDADESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG 126          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: HINT2_MOUSE (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Mus musculus GN=Hint2 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.256e-32
Identity = 61/124 (49.19%), Postives = 91/124 (73.39%), Query Frame = 3
Query:    3 EAAAAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 374
            +A  AA    SPTIF +I+++ +P+ ++YED + L FRD+ PQAP H L+IP+    +  +S+AEE   ++LG LL  AK +A+ +GL+DG+R+V+NDG  G QSV+H+H+H+LGGRQ+ WPPG
Sbjct:   42 KAQKAAPGGASPTIFSRILDRSLPADILYEDQQCLVFRDVAPQAPVHFLVIPRKP--IPRISQAEEDDQQLLGHLLLVAKKIAQAQGLKDGYRLVVNDGKMGAQSVYHLHIHVLGGRQLQWPPG 163          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: HINT1_RAT (Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus GN=Hint1 PE=1 SV=5)

HSP 1 Score: 137.887 bits (346), Expect = 3.848e-32
Identity = 65/123 (52.85%), Postives = 87/123 (70.73%), Query Frame = 3
Query:    6 AAAAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 374
            A A        TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK    ++ +S A++    +LG L+   K  A   GL+ G+R+V+N+G +GGQSV+HIH+H+LGGRQMNWPPG
Sbjct:    6 AKAQVAQPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVADDDDESLLGHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWPPG 126          
BLAST of CK937154 vs. ExPASy Swiss-Prot
Match: HINT1_MOUSE (Histidine triad nucleotide-binding protein 1 OS=Mus musculus GN=Hint1 PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 3.848e-32
Identity = 65/123 (52.85%), Postives = 87/123 (70.73%), Query Frame = 3
Query:    6 AAAAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIEPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQMNWPPG 374
            A A        TIF KII KEIP+K+++EDD+ LAF DI PQAPTH L+IPK    ++ +S A++    +LG L+   K  A   GL+ G+R+V+N+G +GGQSV+HIH+H+LGGRQMNWPPG
Sbjct:    6 AKAQVAQPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKH--ISQISVADDDDESLLGHLMIVGKKCAADLGLKRGYRMVVNEGADGGQSVYHIHLHVLGGRQMNWPPG 126          
The following BLAST results are available for this feature:
BLAST of CK937154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ZB14_MAIZE2.739e-5487.8314 kDa zinc-binding protein OS=Zea mays GN=ZBP14 P... [more]
ZB14_BRAJU1.077e-5084.8214 kDa zinc-binding protein (Fragment) OS=Brassica... [more]
Y1390_SYNE72.665e-3358.93Uncharacterized HIT-like protein Synpcc7942_1390 O... [more]
HINT2_BOVIN4.546e-3352.42Histidine triad nucleotide-binding protein 2, mito... [more]
HINT1_BOVIN1.013e-3253.66Histidine triad nucleotide-binding protein 1 OS=Bo... [more]
HINT2_HUMAN1.323e-3251.61Histidine triad nucleotide-binding protein 2, mito... [more]
HINT1_RABIT1.728e-3252.85Histidine triad nucleotide-binding protein 1 OS=Or... [more]
HINT2_MOUSE2.256e-3249.19Histidine triad nucleotide-binding protein 2, mito... [more]
HINT1_RAT3.848e-3252.85Histidine triad nucleotide-binding protein 1 OS=Ra... [more]
HINT1_MOUSE3.848e-3252.85Histidine triad nucleotide-binding protein 1 OS=Mu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004513_E08 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IVF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937154 ID=CK937154; Name=CK937154; organism=Citrus sinensis; type=EST; length=605bp
AAGAGGCTGCTGCTGCCGCCGTTCCTTCTGATTCGCCCACCATATTTGAC
AAAATAATTAACAAAGAAATCCCATCTAAAGTTGTTTATGAGGATGATAA
GGTCTTAGCCTTTAGGGACATAGAGCCCCAAGCTCCTACACACATTCTAA
TTATTCCCAAAGTGAAGGATGGCTTGACTGGACTTTCAAAGGCTGAGGAA
AGGCATTGCGAAATTCTTGGCCGCCTTCTTTACACTGCTAAGCTTGTTGC
TAAACAGGAAGGACTAGAAGACGGCTTTAGGATTGTGATTAATGATGGGC
CAAATGGAGGTCAATCAGTTTTTCACATCCACGTCCACCTCCTAGGAGGA
CGACAAATGAACTGGCCCCCGGGCTAAGATGAAGTATTTTGGGTGCCAGA
TTCTCTTATGAAAAAATGATTACGCCCTTTGTACTTTAATATGTATCAAG
CTTCAAATAACAAATTACTTGGTGGTTGCTCTGAACCACATTATTTGATA
TGATGTGAAATGACATTGTGCTGGAAGGAGAAAAAGACCTTCAATAATAA
GGGTGTGGTTTGTCGAATTTCTGCATAATTTTCTTTTAAAAAAAAAAAAA
AAAAA
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