CK937144

Overview
NameCK937144
Unique NameCK937144
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937144 vs. ExPASy Swiss-Prot
Match: UFSP_ARATH (Probable Ufm1-specific protease OS=Arabidopsis thaliana GN=At3g48380 PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 5.807e-51
Identity = 101/215 (46.98%), Postives = 136/215 (63.26%), Query Frame = 1
Query:   22 KWXXGSLFFPPLTVVSTVRCIHDNSSSADYDKESDDLQTLLLKGFYIIGALIIKTADAEKNXXXXXXXXXXXXXXXXXXXXMPDTVTIGAVADSLGADIKFFVSRLENSTSIETVDYVLYDDNPEKFVWERGCLIRCELPIKLPFYYPANNPSDAEKRYSHAIESVATKLKDAQIAYVVESLSQVSAEVPLPVLFRGKDLDFDADLSNIKLVGEA 666
            +W  GS FFPP TVVST RCIH    S D+ +ESDDL+ LL KGF +IG LII  +DAEK+                    + D   +GA  D     I FF+S+ EN+T +E V  V+Y+D   K++WE GCL+ CELPIKLPFYYPA++PSD+++++S AI++V T+ K+  + Y+ E+L + S  VP PV+ RGKDL F AD SNI  +  A
Sbjct:   28 QWLIGSPFFPPFTVVSTFRCIHH---SPDFQQESDDLRKLLPKGFEVIGGLIIGDSDAEKSAFEAVRAARRLRKHLSEGGELDDEKIVGASCDVGTGTIHFFISKSENTTKLEPVGSVVYEDKSGKYLWENGCLLHCELPIKLPFYYPASSPSDSKEKFSDAIDAVITQFKEPYVVYIAETLKKASGGVPKPVVLRGKDLGFGADASNINRLPSA 239          
BLAST of CK937144 vs. ExPASy Swiss-Prot
Match: UFSP_ORYSJ (Probable Ufm1-specific protease OS=Oryza sativa subsp. japonica GN=Os12g0285500 PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.374e-28
Identity = 69/214 (32.24%), Postives = 116/214 (54.21%), Query Frame = 1
Query:    4 PPKSKNKWXXGS-LFFPPLTVVSTVRCIHDNSSSADYDKESDDLQTLLLKGFYIIGALIIKTADAEKNXXXXXXXXXXXXXXXXXXXXMPDTVTIGAVADSLGADIKFFVSRLENSTSIETVDYVLYDDNPEKFVWERGCLIRCELPIKLPFYYPANNPSDAEKRYSHAIESVATKLKDAQIAYVVESLSQVSAEVPLPVLFRGKDLDFDADLS 642
            PP    +W  GS  F PPLTV + +R + D +SS D  +E+++++ LL++GF I+GA+ + +ADA                       +   V +G        +I+F VS  +   ++E  + V+++D+P + +WE+GCL+RCEL +KLP Y P+++ S  E R+   IES A+KL+D  ++Y++E       E    ++  G DL+    LS
Sbjct:   27 PPTPSLRWLLGSPRFLPPLTVAAALRSLPDGASSPDLQREAEEIRGLLVRGFDIVGAVHVGSADAGGALELARAVRERLYGERASHGMVGGCVELGT------GEIRFVVSEGDGVEAVEVTE-VVWEDDPGRLLWEKGCLLRCELLLKLPLYVPSDDTSGIEARFYSLIESTASKLRDPHVSYLIEGPRTTPGESHYSIILHGNDLNSVPHLS 233          
The following BLAST results are available for this feature:
BLAST of CK937144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UFSP_ARATH5.807e-5146.98Probable Ufm1-specific protease OS=Arabidopsis tha... [more]
UFSP_ORYSJ2.374e-2832.24Probable Ufm1-specific protease OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004513_F08 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0003_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937144 ID=CK937144; Name=CK937144; organism=Citrus sinensis; type=EST; length=666bp
GGCCCCCCCAAATCTAAAAACAAGTGGCNNNNCGGATCCCTTTTTTTTCC
GCCACTCACTGTCGTATCCACCGTTAGATGCATCCACGACAACTCTTCCT
CTGCGGATTACGACAAAGAGTCAGATGATCTCCAGACATTATTATTAAAA
GGATTTTACATAATCGGAGCTTTAATTATCAAAACCGCGGACGCTGAGAA
AAACGCGAGGGAGGCTATTGATGCAGCCCGCAGATTGCGAAGGCTTTTAT
CTGGTGAAGCTGAAATGCCTGATACCGTTACAATTGGCGCAGTTGCGGAT
TCTCTTGGTGCTGATATTAAGTTTTTTGTCTCGAGATTGGAAAATTCGAC
GAGTATTGAAACTGTTGATTATGTTTTGTACGATGATAATCCGGAGAAGT
TTGTTTGGGAGAGAGGCTGTTTAATTCGATGCGAACTTCCAATTAAGCTG
CCTTTTTATTATCCTGCTAATAATCCCTCTGATGCAGAGAAAAGGTATTC
GCATGCCATTGAATCAGTTGCTACCAAGCTCAAAGATGCCCAAATTGCTT
ACGTGGTTGAATCGCTAAGCCAAGTCTCTGCAGAAGTGCCTCTACCTGTT
CTTTTTCGTGGTAAAGATTTGGACTTTGACGCAGATCTTTCGAATATCAA
GCTTGTGGGTGAAGCT
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