CX675260

Overview
NameCX675260
Unique NameCX675260
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675260 vs. ExPASy Swiss-Prot
Match: PATL6_ARATH (Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.822e-97
Identity = 174/234 (74.36%), Postives = 203/234 (86.75%), Query Frame = 3
Query:   72 KKSFVASLMEAATLRSPSFKEDSYFVSQLKSSEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSM 773
            KKSF+ SL+   TLRS + KED+YFVS+LK +E+K+LQELK +L+     S     SMWG+ LLG GD++ADVILLKFLRARDF+V DS  MLEKCL WR+EF A+ + EEDLGFK+LEG VAYM+GYD+EGHPVCYNAYGVF++K+MYER+FGD+EKL KFLRWRVQVLERG+ +LHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPE+VA KIFINVPWYFS+
Sbjct:   19 KKSFITSLI---TLRSNNIKEDTYFVSELKPTEQKSLQELKEKLS----ASSSKASSMWGVSLLG-GDDKADVILLKFLRARDFKVADSLRMLEKCLEWREEFKAEKLTEEDLGFKDLEGKVAYMRGYDKEGHPVCYNAYGVFKEKEMYERVFGDEEKLNKFLRWRVQVLERGVKMLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPELVATKIFINVPWYFSV 244          
BLAST of CX675260 vs. ExPASy Swiss-Prot
Match: PATL3_ARATH (Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 6.335e-58
Identity = 119/222 (53.60%), Postives = 158/222 (71.17%), Query Frame = 3
Query:  123 SFKEDSYFVSQLKSSEKKALQELKNRLA---DSHNGSGE-NECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMP---KRELRVASNQILSLFQDNYPEMVARKIFINVPWYF 767
            SFKE+S  +S L +SEKK+L ELK+ +    D+H  +    E  +WGIPLL   D+R+DV+LLKFLRAR+F+V DSF ML+  + WRKEF  D +VEEDL   +L+ VV +M G+DREGHPVCYN YG F++K++Y + F D+EK K FLR R+Q LER I  L F  GGV++I QV D+K+ P   K+ELR A+ Q + L QDNYPE V ++ FINVPW++
Sbjct:  108 SFKEESSKLSDLSNSEKKSLDELKHLVREALDNHQFTNTPEEVKIWGIPLLE--DDRSDVVLLKFLRAREFKVKDSFAMLKNTIKWRKEFKIDELVEEDL-VDDLDKVV-FMHGHDREGHPVCYNVYGEFQNKELYNKTFSDEEKRKHFLRTRIQFLERSIRKLDFSSGGVSTIFQVNDMKNSPGLGKKELRSATKQAVELLQDNYPEFVFKQAFINVPWWY 325          
BLAST of CX675260 vs. ExPASy Swiss-Prot
Match: PATL5_ARATH (Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 7.005e-57
Identity = 112/218 (51.38%), Postives = 159/218 (72.94%), Query Frame = 3
Query:  123 SFKEDSYFVSQLKSSEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMP---KRELRVASNQILSLFQDNYPEMVARKIFINVPWYF 767
            SFKE++  +S L  +E  ALQEL++ L  S + S   + S+WG+PLL   D+R DV+LLKFLRARDF+  ++++ML K L WR +F  + +++E+LG  +L+ VV +MQG D+E HPVCYN YG F++KD+Y++ F D+EK ++FLRWR+Q LE+ I  L F  GGV++I QV DLK+ P   K ELR+A+ Q L L QDNYPE V+++IFINVPW++
Sbjct:  290 SFKEETNKISDLSETELNALQELRHLLQVSQDSS---KTSIWGVPLLK--DDRTDVVLLKFLRARDFKPQEAYSMLNKTLQWRIDFNIEELLDENLG-DDLDKVV-FMQGQDKENHPVCYNVYGEFQNKDLYQKTFSDEEKRERFLRWRIQFLEKSIRNLDFVAGGVSTICQVNDLKNSPGPGKTELRLATKQALHLLQDNYPEFVSKQIFINVPWWY 500          
BLAST of CX675260 vs. ExPASy Swiss-Prot
Match: PATL4_ARATH (Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 8.882e-44
Identity = 95/212 (44.81%), Postives = 137/212 (64.62%), Query Frame = 3
Query:  159 KSSEKKALQELKNRL--ADSHNGSGENECSMWGIPLLGT-GDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMP---KRELRVASNQILSLFQDNYPEMVARKIFINVP-WYFSM 773
            K +E    +E+K      +  + S + +  +WG+PLL + G E  DVILLKFLRARDF+V ++F ML+K L WRK+   D I+ E+ G  E     AYM G DRE HPVCYN +     +++Y+ I G ++  +KFLRWR Q++E+GI  L+ KPGGV S++Q+ DLK+ P   + E+ V   +++   QDNYPE V+R IFINVP W+++M
Sbjct:  175 KKTEDVVTEEVKAETIEVEDEDESVDKDIELWGVPLLPSKGAESTDVILLKFLRARDFKVNEAFEMLKKTLKWRKQNKIDSILGEEFG--EDLATAAYMNGVDRESHPVCYNVH----SEELYQTI-GSEKNREKFLRWRFQLMEKGIQKLNLKPGGVTSLLQIHDLKNAPGVSRTEIWVGIKKVIETLQDNYPEFVSRNIFINVPFWFYAM 379          
BLAST of CX675260 vs. ExPASy Swiss-Prot
Match: PATL2_ARATH (Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.957e-40
Identity = 86/181 (47.51%), Postives = 121/181 (66.85%), Query Frame = 3
Query:  234 ECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMP---KRELRVASNQILSLFQDNYPEMVARKIFINVPWYF 767
            E S+WGIPLL   DER+DVILLKFLRARDF+V ++F ML+  + WRKE   D +V EDL   E E +V +  G D++GH V Y++YG F++K+    IF D EKL KFL+WR+Q  E+ +  L F P   +S + V+D ++ P   +R L     + +  F+DNYPE VA+++FINVPW++
Sbjct:  350 EVSIWGIPLLE--DERSDVILLKFLRARDFKVKEAFTMLKNTVQWRKENKIDDLVSEDLEGSEFEKLV-FTHGVDKQGHVVIYSSYGEFQNKE----IFSDKEKLSKFLKWRIQFQEKCVRSLDFSPEAKSSFVFVSDFRNAPGLGQRALWQFIKRAVKQFEDNYPEFVAKELFINVPWWY 523          
BLAST of CX675260 vs. ExPASy Swiss-Prot
Match: PATL1_ARATH (Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.518e-35
Identity = 80/182 (43.96%), Postives = 116/182 (63.74%), Query Frame = 3
Query:  234 ECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHF-KPGGVNSIIQVTDLKDMP---KRELRVASNQILSLFQDNYPEMVARKIFINVPWYF 767
            E S+WG+PLL   DER+DVIL KFLRARDF+V ++  ML+  + WRKE   D +VE      E E +V +  G D+EGH V Y++YG F++K+    +F D EKL KFL WR+Q+ E+ +  + F  P   +S + V+D ++ P   KR L     + +  F+DNYPE  A+++FINVPW++
Sbjct:  241 EVSIWGVPLLQ--DERSDVILTKFLRARDFKVKEALTMLKNTVQWRKENKIDELVESGEEVSEFEKMV-FAHGVDKEGHVVIYSSYGEFQNKE----LFSDKEKLNKFLSWRIQLQEKCVRAIDFSNPEAKSSFVFVSDFRNAPGLGKRALWQFIRRAVKQFEDNYPEFAAKELFINVPWWY 415          
BLAST of CX675260 vs. ExPASy Swiss-Prot
Match: SFH5_YARLI (Phosphatidylinositol transfer protein SFH5 OS=Yarrowia lipolytica GN=SFH5 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.316e-22
Identity = 78/216 (36.11%), Postives = 116/216 (53.70%), Query Frame = 3
Query:  156 LKSSEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDE--------RADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGA--DGIVEEDLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGINLLHF-KPGGVNSIIQVTDLKDMP----KRELRVASNQILSLFQDNYPEMVARKIFINVP 758
            L+ SE +AL++L++ L      +  NE  M+G  L    D         + D+ILLKFL+ARD+ +  + +ML   L WRKEF        + D  F +L GV+   +G   E     +N YG   ++   + IFGD   LK FLRWRV ++ER + LL F KPG  + ++Q+ D K++       E + AS + + +FQ  YPE + RK F+NVP
Sbjct:   10 LQPSELEALKKLQDELPKILEKTDYNE--MYGHKLSEAEDGPGKAYSEVKRDIILLKFLKARDYDIAQTKDMLTDALKWRKEFDPLDCASAKHDSKFDKL-GVIT-DKGAGGEPQVTNWNLYGAVSNR---KEIFGD---LKGFLRWRVGIMERSLALLDFTKPGAGSMLLQIHDYKNVSFLRLDAETKAASKETIRVFQSYYPETLERKFFVNVP 215          
BLAST of CX675260 vs. ExPASy Swiss-Prot
Match: SFH5_PICGU (Phosphatidylinositol transfer protein SFH5 OS=Pichia guilliermondii GN=SFH5 PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.848e-20
Identity = 71/242 (29.34%), Postives = 120/242 (49.59%), Query Frame = 3
Query:  120 PSFKEDSYFVSQLKSSE------KKALQELKNRLADSHNGSGENECSMWGIPLLGTG-----DERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELE--GVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKK----FLRWRVQVLERGINLLHFKPGGVNSIIQVTDLKDMPKREL----RVASNQILSLFQDNYPEMVARKIFINVP----WYFS 770
            P+ K+    VS  K ++      KK + EL   L ++ + S +    ++G  +  +G     DE  + I+LKFL A +++  ++   L     WRK+F        +   KEL+  GV+    G +   H V +N YG  +      + FG D+K +K    FLRWR+ ++ER ++L+ F     + I QV D  ++    +    + A+ +I+ +F DNYPE+++ K FINVP    W F+
Sbjct:   25 PAKKDQPVLVSTTKLTKTQSETLKKLIDELPQILEETGDSSYDE---IYGYRINKSGLEHVHDEIRNEIVLKFLIAEEYKFEEARTRLINTFKWRKKFQPLSAAYSETFDKELDDLGVITKYDGTNENLHVVTWNLYGNLKSPKKLFQKFGQDDKAEKEGSPFLRWRIGLMERALSLIDFTDKSNSKIAQVHDYNNVSMFRMDPGMKAATKEIIKIFGDNYPELLSTKFFINVPTIMSWVFT 263          
BLAST of CX675260 vs. ExPASy Swiss-Prot
Match: SFH5_COCIM (Phosphatidylinositol transfer protein SFH5 OS=Coccidioides immitis GN=SFH5 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.977e-15
Identity = 66/240 (27.50%), Postives = 109/240 (45.42%), Query Frame = 3
Query:  114 RSPSFKEDSYFVSQLKSSEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEE----DLGFKELEGVVAYMQGYDREGHPVCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGI---------NLLHFKPGGVNSIIQVTDLKDMP----KRELRVASNQILSLFQDNYPEMVARKIFINVP----WYFS 770
            + P+    SY V+        AL +  +RLA     +G NE  MWG+PL    D     I++KFLRA +  V  +   L K L WRK+     + E        FK L  +  Y      +     +N YG  ++ D+    FG+   L++F++WRV ++E  I         +++ +       +IQV D +++        +R AS + + +F   YPE++  K F+N+P    W F+
Sbjct:  100 QEPADTRPSYLVNNA------ALSQFFDRLAPIVEKAGHNE--MWGVPLKDAQDAPTVNIMIKFLRANEGNVKLAEEQLVKALEWRKKMNPLALAESAAFPSSKFKGLGYITTYRDPTTEKNVVFTWNIYGSVKNVDL---TFGN---LEEFIKWRVALMELAIRELRLESATSVMDYNGEDPYQMIQVHDYQNVSFIRMNPNIRAASRETIEVFSTAYPELLKEKYFVNLPVVMGWVFT 325          
BLAST of CX675260 vs. ExPASy Swiss-Prot
Match: SFH5_ASPOR (Phosphatidylinositol transfer protein sfh5 OS=Aspergillus oryzae GN=sfh5 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.478e-14
Identity = 62/222 (27.93%), Postives = 109/222 (49.10%), Query Frame = 3
Query:  165 SEKKALQELKNRLADSHNGSGENECSMWGIPLLGTGDERADVILLKFLRARDFRVLDSFNMLEKCLAWRKEFGADGIVEEDLGFKELEGVVAYMQGY-DREGHP--VCYNAYGVFRDKDMYERIFGDDEKLKKFLRWRVQVLERGI---------NLLHFKPGGVNSIIQVTDLKDMP----KRELRVASNQILSLFQDNYPEMVARKIFINVP----WYFS 770
            ++  AL +L +RL    + SG +E  MWG+PL  + D     +L+KFLRA +  V  + + L K L WRK+     +VE     K+  G + Y+  Y D +G    + +N YG  +D       FG+   + +F+ WRV ++E  +         +++ ++      +IQV D  ++        ++ A+ + + +F   YPE++  K F+NVP    W F+
Sbjct:  108 AKNPALSQLFDRLPTVLSNSGHDE--MWGVPLRDSSDVPTVNVLIKFLRANEGNVKLAEDQLTKALQWRKQTRPTALVEGRYSAKKFGG-LGYLSTYKDADGKETVITWNIYGGVKD---LGTTFGN---VDEFINWRVALMELAVKDLKMDQATSVIDYEGEDPYQMIQVHDYLNVSFLRMNPSVKAATKKTIDVFATAYPELLREKFFVNVPSIMGWMFA 320          
The following BLAST results are available for this feature:
BLAST of CX675260 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
PATL6_ARATH1.822e-9774.36Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 S... [more]
PATL3_ARATH6.335e-5853.60Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 S... [more]
PATL5_ARATH7.005e-5751.38Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 S... [more]
PATL4_ARATH8.882e-4444.81Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 S... [more]
PATL2_ARATH5.957e-4047.51Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 S... [more]
PATL1_ARATH1.518e-3543.96Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 S... [more]
SFH5_YARLI7.316e-2236.11Phosphatidylinositol transfer protein SFH5 OS=Yarr... [more]
SFH5_PICGU6.848e-2029.34Phosphatidylinositol transfer protein SFH5 OS=Pich... [more]
SFH5_COCIM2.977e-1527.50Phosphatidylinositol transfer protein SFH5 OS=Cocc... [more]
SFH5_ASPOR1.478e-1427.93Phosphatidylinositol transfer protein sfh5 OS=Aspe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_60H11_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-60H11-O22-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675260 ID=CX675260; Name=CX675260; organism=Citrus sinensis; type=EST; length=775bp
CCTCACCCATGTCCCTTCAACAACCCAAAACCCCACCCCCAGAGGCCTCA
CCTAAACCGTACACCAGTAACAAGAAATCCTTCGTCGCTTCTCTGATGGA
AGCCGCCACTCTTCGCTCTCCTTCCTTCAAAGAAGACTCTTACTTCGTCT
CTCAACTCAAATCCTCCGAAAAGAAGGCCTTACAAGAGCTCAAGAACAGG
CTTGCGGACTCCCACAACGGCTCTGGTGAGAACGAATGCTCCATGTGGGG
GATTCCCCTTCTGGGTACCGGTGACGAAAGAGCGGATGTGATTCTGCTCA
AGTTTCTGAGAGCAAGGGACTTCAGGGTTCTAGATTCTTTCAACATGCTG
GAGAAATGCTTGGCTTGGAGAAAAGAGTTTGGAGCAGACGGCATCGTTGA
GGAGGACTTGGGGTTCAAGGAACTCGAAGGCGTGGTGGCTTATATGCAGG
GTTACGACAGAGAAGGCCACCCTGTGTGTTACAATGCTTATGGGGTCTTT
AGAGACAAGGATATGTATGAAAGGATCTTTGGGGACGATGAGAAGCTCAA
AAAATTTTTGAGATGGAGAGTTCAGGTTTTGGAAAGAGGCATCAATCTCT
TGCATTTTAAGCCTGGAGGTGTTAATTCCATTATTCAAGTCACTGATCTT
AAAGACATGCCCAAGAGAGAGCTTAGGGTTGCCTCTAATCAGATCCTCTC
TCTTTTTCAAGATAATTATCCTGAAATGGTTGCACGGAAGATTTTTATCA
ATGTGCCATGGTACTTCAGCATGCT
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