CX675259
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675259 vs. ExPASy Swiss-Prot
Match: PATL6_ARATH (Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1) HSP 1 Score: 352.443 bits (903), Expect = 1.860e-96 Identity = 169/202 (83.66%), Postives = 188/202 (93.07%), Query Frame = -1 Query: 259 DMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLSRPSDLNNGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEEAIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVRKSS 864 DMPKRELRVASNQILSLFQDNYPE+VA KIFINVPWYFS++YSMFSPFLTQRTKSKFV+SKEGN AETLYKF+RPEDIPVQYGGLSRP+D NGPPKPASEF++KGGEKVNIQIEGIE GATITWDIVVGGWDLEYSAEFVPNAE SY I VEKP+K+ ++EA+ NSFT+ EAGKL+LSVDN+ SR++KVAAYRY VRKS+ Sbjct: 205 DMPKRELRVASNQILSLFQDNYPELVATKIFINVPWYFSVIYSMFSPFLTQRTKSKFVMSKEGNAAETLYKFIRPEDIPVQYGGLSRPTDSQNGPPKPASEFSIKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEESYAIVVEKPKKMKATDEAVCNSFTTVEAGKLILSVDNTLSRKKKVAAYRYTVRKST 406
BLAST of CX675259 vs. ExPASy Swiss-Prot
Match: PATL4_ARATH (Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 5.680e-45 Identity = 90/199 (45.23%), Postives = 128/199 (64.32%), Query Frame = -1 Query: 259 KRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLSRPSDLNNGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEEAIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVRKSS 855 + E+ V +++ QDNYPE V+R IFINVP++F + ++ SPFLTQRTKSKFV+++ V ETL K++ +++PVQYGG D + SE VK G I+I E T+ WDI V GW++ Y EFVP EG+YT+ V+K +K+ +E IRNSF + +AGK+VL+VDN S +++KV YRY + S Sbjct: 342 RTEIWVGIKKVIETLQDNYPEFVSRNIFINVPFWFYAMRAVLSPFLTQRTKSKFVVARPAKVRETLLKYIPADELPVQYGGFKTVDD-TEFSNETVSEVVVKPGSSETIEIPAPETEGTLVWDIAVLGWEVNYKEEFVPTEEGAYTVIVQKVKKMGANEGPIRNSFKNSQAGKIVLTVDNVSGKKKKV-LYRYRTKTES 538
BLAST of CX675259 vs. ExPASy Swiss-Prot
Match: PATL3_ARATH (Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 1.399e-43 Identity = 91/200 (45.50%), Postives = 133/200 (66.50%), Query Frame = -1 Query: 268 KRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLS-RPSDLNN--GPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEE-AIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVR 855 K+ELR A+ Q + L QDNYPE V ++ FINVPW++ + Y++ PF+T R+KSK V + AETL+K++ PE +PVQYGGLS P D N ASE TVK G K ++I I + W+I V GW++ Y AEFVP + +YT+ ++KPRK+ PS+E + +SF E GK++L+VDN +S+++K+ YR+ V+ Sbjct: 291 KKELRSATKQAVELLQDNYPEFVFKQAFINVPWWYLVFYTVIGPFMTPRSKSKLVFAGPSRSAETLFKYISPEQVPVQYGGLSVDPCDCNPDFSLEDSASEITVKPGTKQTVEII-IYEKCELVWEIRVTGWEVSYKAEFVPEEKDAYTVVIQKPRKMRPSDEPVLTHSFKVNELGKVLLTVDNPTSKKKKL-VYRFNVK 488
BLAST of CX675259 vs. ExPASy Swiss-Prot
Match: PATL5_ARATH (Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 3.225e-40 Identity = 89/200 (44.50%), Postives = 128/200 (64.00%), Query Frame = -1 Query: 268 KRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLSRPSDLNNGP---PKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEE-AIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRYIVR 855 K ELR+A+ Q L L QDNYPE V+++IFINVPW++ Y + SPF++QR+KSK V + AETL K++ PE +PVQYGGLS + N A+E TVK K ++I E TI W+I V GW++ Y AEFVP + YT+ ++KPRK++ E + +SF E G+++L+VDN +S +K+ YR+ V+ Sbjct: 466 KTELRLATKQALHLLQDNYPEFVSKQIFINVPWWYLAFYRIISPFMSQRSKSKLVFAGPSRSAETLLKYISPEHVPVQYGGLSVDNCECNSDFTHDDIATEITVKPTTKQTVEIIVYEK-CTIVWEIRVVGWEVSYGAEFVPENKEGYTVIIQKPRKMTAKNELVVSHSFKVGEVGRILLTVDNPTS-TKKMLIYRFKVK 663
BLAST of CX675259 vs. ExPASy Swiss-Prot
Match: PATL2_ARATH (Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 2.025e-34 Identity = 76/178 (42.70%), Postives = 117/178 (65.73%), Query Frame = -1 Query: 292 FQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQ-RTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLSR--PSDLNNGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKISPSEE-AIRNSFTSKEAGKLVLSVDNSSSRRRKV 813 F+DNYPE VA+++FINVPW++ Y F +T RT+SK V+S AET++K+V PE +PV+YGGLS+ P + +G +E VK K I + E G+T++W++ V G D+ Y A+F P+ E SYT+ V K RK+ ++E I +SF + EAGK+V+++DN + +++KV Sbjct: 503 FEDNYPEFVAKELFINVPWWYIPYYKTFGSIITSPRTRSKMVLSGPSKSAETIFKYVAPEVVPVKYGGLSKDSPFTVEDG----VTEAVVKSTSKYTIDLPATE-GSTLSWELRVLGADVSYGAQFEPSNEASYTVIVSKNRKVGLTDEPVITDSFKASEAGKVVITIDNQTFKKKKV 675
BLAST of CX675259 vs. ExPASy Swiss-Prot
Match: PATL1_ARATH (Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 7.695e-34 Identity = 77/195 (39.49%), Postives = 119/195 (61.03%), Query Frame = -1 Query: 277 KRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQ-RTKSKFVISKEGNVAETLYKFVRPEDIPVQYGGLSRPSDLNNGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKI-SPSEEAIRNSFTSKEAGKLVLSVDNSSSRRRKVAAYRY 855 KR L + + F+DNYPE A+++FINVPW++ Y F +T RT+SK V++ A+T++K++ PE +PV+YGGLS+ + L + +E VK I++ EA T++W++ V G D+ Y A+F P EGSY + V K RKI S E I +SF E GK+V+++DN +S+++KV YR+ Sbjct: 381 KRALWQFIRRAVKQFEDNYPEFAAKELFINVPWWYIPYYKTFGSIITSPRTRSKMVLAGPSKSADTIFKYIAPEQVPVKYGGLSKDTPLTE---ETITEAIVKPAANYTIELPASEA-CTLSWELRVLGADVSYGAQFEPTTEGSYAVIVSKTRKIGSTDEPVITDSFKVGEPGKIVITIDNQTSKKKKV-LYRF 570 The following BLAST results are available for this feature:
BLAST of CX675259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675259 ID=CX675259; Name=CX675259; organism=Citrus sinensis; type=EST; length=864bpback to top |