CK937131

Overview
NameCK937131
Unique NameCK937131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 1.288e-98
Identity = 164/208 (78.85%), Postives = 179/208 (86.06%), Query Frame = 1
Query:  157 VPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780
            VP    K + DPLKRVP  KP F+LSQ+KKAIPPHCF+RSVLRSFSYVV+DLTIAF  YY+A  Y H LP PLS+    +YWA+QGCILTGVWV+AHECGHHAFSDYQ L D VGLILHS LLVPYFSWKYSHRRHHSNTGSL+RDEVFVPKQK+ I WY+KYLNNP GRV+TL VTLTLGWPLYLA NVSGRPYDRFACH+DPYGPI
Sbjct:    9 VPPANRKSEVDPLKRVPFEKPQFSLSQIKKAIPPHCFQRSVLRSFSYVVYDLTIAFCLYYVATHYFHLLPGPLSFRGMAIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVLTLAVTLTLGWPLYLALNVSGRPYDRFACHYDPYGPI 216          
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 3.509e-96
Identity = 154/208 (74.04%), Postives = 175/208 (84.13%), Query Frame = 1
Query:  157 VPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780
            VP++  K ++D  KRVPC KPPF++  +KKAIPPHCF+RS+ RSFSY++ D+ IA  FYY+A  Y   LP PLSYLAWP+YWA QGC+LTG+WV+AHECGHHAFSDYQWL DTVGLI HS LLVPYFSWKYSHRRHHSNTGSL+RDEVFVPKQK+AI WY KYLNNPLGR++ LTV   LGWPLYLAFNVSGRPYD FACHF P  PI
Sbjct:    9 VPTSSKKSETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNYFSLLPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQFVLGWPLYLAFNVSGRPYDGFACHFFPNAPI 216          
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 2.780e-93
Identity = 152/209 (72.73%), Postives = 174/209 (83.25%), Query Frame = 1
Query:  157 VPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPY-DRFACHFDPYGPI 780
            V  +P K ++D LKRVPC  PPFT+ ++KKAIPPHCF+RS+ RSFSY++ D+ +A  FYY+A TY   LPHPLSY+AWP+YWA QG +LTGVWV+AHECGHHAFSDYQWL DTVGLI HS LLVPYFSWKYSHRRHHSNTGSL+RDEVFVPK+K+ I WY KYLNNPLGR + LTV  TLGWPLY AFNVSGRPY + FACHF P  PI
Sbjct:    9 VSPSPKKSETDTLKRVPCETPPFTVGELKKAIPPHCFKRSIPRSFSYLIWDIIVASCFYYVATTYFPLLPHPLSYVAWPLYWACQGVVLTGVWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQFTLGWPLYWAFNVSGRPYPEGFACHFHPNAPI 217          
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.526e-91
Identity = 147/197 (74.62%), Postives = 169/197 (85.79%), Query Frame = 1
Query:  190 PLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780
            PL RVP +KPPFT+ Q+KKAIPPHCF+RS+L SFSYVV+DL+ AF+FY IA TY H LP P S +AWP+YW LQGC+LTGVWV+AHECGHHAFS YQW+ D VGL LHS LLVPYFSWK SHRRHHSNTGSLDRDEVFVPK K+ + W++KYLNNPLGR ++L VTLT+GWP+YLAFNVSGRPYD FA H+ PY PI
Sbjct:   25 PLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSFSYVVYDLSFAFIFY-IATTYFHLLPQPFSLIAWPIYWVLQGCLLTGVWVIAHECGHHAFSKYQWVDDVVGLTLHSTLLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWFSKYLNNPLGRAVSLLVTLTIGWPMYLAFNVSGRPYDSFASHYHPYAPI 220          
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 1.174e-75
Identity = 123/202 (60.89%), Postives = 153/202 (75.74%), Query Frame = 1
Query:  175 KVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780
            +    PL       PPFT+S +K+AIPPHCF+RSV+RS  Y+VHD  IA++FY++AD YI  LP PL+YLAWP+YW  Q  ILTG+WV+ HECGHHAFSDYQW+ DTVG ILHS L+ PYFSWKYSHR HH+NT SLD DEV++PK K  +  Y K LN+P GR++ + +T TLG+PLYL  N+SG+ Y+RFA HFDP  PI
Sbjct:    8 RTSQKPLMERVSVDPPFTVSDLKQAIPPHCFKRSVIRSSYYIVHDAIIAYIFYFLADKYIPILPAPLAYLAWPLYWFCQASILTGLWVIGHECGHHAFSDYQWVDDTVGFILHSFLMTPYFSWKYSHRNHHANTNSLDNDEVYIPKSKAKVALYYKVLNHPPGRLLIMFITFTLGFPLYLFTNISGKKYERFANHFDPMSPI 209          
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.419e-46
Identity = 90/205 (43.90%), Postives = 124/205 (60.49%), Query Frame = 1
Query:  217 PPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPL-SYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAK--------------YLNN--PLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780
            P FT+ ++++ IP HCFERS LR   +V  DLT A + + +A T I +  +PL  YLAWP YW +QG + TG+WV+AHECGH +FS  + L +TVG ILHS LLVPY SW+ SH +HH  TG + +D+VFVPK ++ +G   K              +L+   P+  +  + +    GWP YL  N SG+ Y R+  HF  Y PI
Sbjct:   36 PEFTIKEIRECIPAHCFERSGLRGLCHVAIDLTWASLLF-LAATQIDKFENPLIRYLAWPAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKESAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPI 239          
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 7.419e-46
Identity = 90/205 (43.90%), Postives = 124/205 (60.49%), Query Frame = 1
Query:  217 PPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPL-SYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAK--------------YLNN--PLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780
            P FT+ ++++ IP HCFERS LR   +V  DLT A + + +A T I +  +PL  YLAWP YW +QG + TG+WV+AHECGH +FS  + L +TVG ILHS LLVPY SW+ SH +HH  TG + +D+VFVPK ++ +G   K              +L+   P+  +  + +    GWP YL  N SG+ Y R+  HF  Y PI
Sbjct:   36 PEFTIKEIRECIPAHCFERSGLRGLCHVAIDLTWASLLF-LAATQIDKFENPLIRYLAWPAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKENAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPI 239          
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.988e-34
Identity = 78/193 (40.41%), Postives = 110/193 (56.99%), Query Frame = 1
Query:  205 PCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTL-TLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780
            P ++PPF +  ++ AIP HC+ +S LRS SYVV D+ IA     IA  Y+       S+  WP+YWA QG +   ++V+ H+CGH +FSD   L   VG ILHS +LVPY  W+ SHR HH N G ++ DE +VP  +     Y K  ++   R++  TV L  L +PLYL +   G+       HF+PY  +
Sbjct:   28 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDI-IAVAALAIAAVYVD------SWFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPERV---YKKLPHST--RMLRYTVPLPMLAYPLYLCYRSPGKE----GSHFNPYSSL 204          
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.963e-32
Identity = 72/195 (36.92%), Postives = 108/195 (55.38%), Query Frame = 1
Query:  205 PCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVP---KQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780
            P + PPF L++++  IP HC+ +  LRS SYVV D+        IA        H  S+L +P+YWA+QG +   ++V+ H+CGH +FSD Q L + VG ILHS +LVPY  W+ SH+ HH N G+++ DE +VP   K    +G+  K+L   +   +       L +P+YL     G+       HF+PY  +
Sbjct:   24 PSAPPPFRLAEIRNVIPKHCWVKDPLRSLSYVVRDVIFVATLIGIAI-------HLDSWLFYPLYWAIQGTMFWAIFVLGHDCGHGSFSDSQLLNNVVGHILHSAILVPYHGWRISHKTHHQNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPFPL-------LAYPMYLMKRSPGKS----GSHFNPYSDL 200          
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.774e-31
Identity = 74/194 (38.14%), Postives = 105/194 (54.12%), Query Frame = 1
Query:  205 PCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLG-RVITLTVTL-TLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780
            P ++PPF +  ++ AIP HC+ +S LRS SYV  D+  A     +A  Y        S+  WP+YW  QG +   ++V+ H+CGH +FSD   L   VG ILHS +LVPY  W+ SHR HH N G ++ DE +VP  +        Y N P   R++  TV L  L +P+YL +   G+       HF+PY  +
Sbjct:   25 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVTRDI-FAVAALAMAAVYFD------SWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPEKL------YKNLPHSTRMLRYTVPLPMLAYPIYLWYRSPGKE----GSHFNPYSSL 201          
The following BLAST results are available for this feature:
BLAST of CK937131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
FD6E2_SOYBN1.288e-9878.85Omega-6 fatty acid desaturase, endoplasmic reticul... [more]
FAD6E_ARATH3.509e-9674.04Omega-6 fatty acid desaturase, endoplasmic reticul... [more]
FAD6E_BRAJU2.780e-9372.73Omega-6 fatty acid desaturase, endoplasmic reticul... [more]
FD6E1_SOYBN1.526e-9174.62Omega-6 fatty acid desaturase, endoplasmic reticul... [more]
FAD12_CREAL1.174e-7560.89Delta(12) fatty acid dehydrogenase OS=Crepis alpin... [more]
FAD12_MORIS7.419e-4643.90Delta(12) fatty acid desaturase OS=Mortierella isa... [more]
FAD12_MORAP7.419e-4643.90Delta(12) fatty acid desaturase OS=Mortierella alp... [more]
FAD3E_ARATH4.988e-3440.41Omega-3 fatty acid desaturase, endoplasmic reticul... [more]
FAD3E_TOBAC7.963e-3236.92Omega-3 fatty acid desaturase, endoplasmic reticul... [more]
FAD3E_BRANA1.774e-3138.14Omega-3 fatty acid desaturase, endoplasmic reticul... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004514_A02 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IF_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937131 ID=CK937131; Name=CK937131; organism=Citrus sinensis; type=EST; length=782bp
GGGGGAGAGCCGAACGTTTACAACTCACAACGCGGCCGGCGAAGGCGAGA
AAGAGAGAGGGAGAGAAAGTGAGGTCTCTCATTTTCTTCTTCTTTGCAGT
CCAAGTGCTTCGCTTCTTCAGGTTGACGAACAATGGGTGCAGGTGGACGA
ATGGCTGTACCTTCAACGCCCATGAAGGTGGATTCTGATCCCTTGAAGCG
AGTTCCATGCTCAAAGCCACCATTCACACTCAGCCAAGTAAAGAAAGCTA
TCCCACCTCACTGTTTTGAGCGGTCTGTTCTCCGTTCATTCTCCTACGTT
GTTCATGACCTCACCATTGCCTTTGTCTTTTACTACATTGCCGACACTTA
CATTCACCAACTTCCTCACCCTCTCTCTTATCTGGCCTGGCCAGTTTACT
GGGCTCTTCAAGGCTGCATTTTAACTGGAGTTTGGGTTGTAGCTCATGAA
TGTGGCCACCATGCCTTCAGTGACTATCAATGGCTTGGCGACACTGTTGG
CCTTATCCTCCACTCTTGCCTCCTTGTCCCCTACTTCTCTTGGAAGTATA
GCCATCGCCGCCATCACTCCAATACAGGATCCCTTGATCGTGATGAAGTA
TTTGTCCCCAAGCAAAAAACCGCCATTGGTTGGTATGCCAAGTACCTTAA
CAACCCACTTGGCCGAGTCATAACACTTACTGTCACCCTCACCCTTGGCT
GGCCTTTGTACCTGGCATTCAATGTATCCGGTAGGCCTTATGATAGATTT
GCTTGCCACTTTGATCCTTATGGCCCCATCTA
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