CK937131
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 359.377 bits (921), Expect = 1.288e-98 Identity = 164/208 (78.85%), Postives = 179/208 (86.06%), Query Frame = 1 Query: 157 VPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780 VP K + DPLKRVP KP F+LSQ+KKAIPPHCF+RSVLRSFSYVV+DLTIAF YY+A Y H LP PLS+ +YWA+QGCILTGVWV+AHECGHHAFSDYQ L D VGLILHS LLVPYFSWKYSHRRHHSNTGSL+RDEVFVPKQK+ I WY+KYLNNP GRV+TL VTLTLGWPLYLA NVSGRPYDRFACH+DPYGPI Sbjct: 9 VPPANRKSEVDPLKRVPFEKPQFSLSQIKKAIPPHCFQRSVLRSFSYVVYDLTIAFCLYYVATHYFHLLPGPLSFRGMAIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVLTLAVTLTLGWPLYLALNVSGRPYDRFACHYDPYGPI 216
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 3.509e-96 Identity = 154/208 (74.04%), Postives = 175/208 (84.13%), Query Frame = 1 Query: 157 VPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780 VP++ K ++D KRVPC KPPF++ +KKAIPPHCF+RS+ RSFSY++ D+ IA FYY+A Y LP PLSYLAWP+YWA QGC+LTG+WV+AHECGHHAFSDYQWL DTVGLI HS LLVPYFSWKYSHRRHHSNTGSL+RDEVFVPKQK+AI WY KYLNNPLGR++ LTV LGWPLYLAFNVSGRPYD FACHF P PI Sbjct: 9 VPTSSKKSETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNYFSLLPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQFVLGWPLYLAFNVSGRPYDGFACHFFPNAPI 216
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 2.780e-93 Identity = 152/209 (72.73%), Postives = 174/209 (83.25%), Query Frame = 1 Query: 157 VPSTPMKVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPY-DRFACHFDPYGPI 780 V +P K ++D LKRVPC PPFT+ ++KKAIPPHCF+RS+ RSFSY++ D+ +A FYY+A TY LPHPLSY+AWP+YWA QG +LTGVWV+AHECGHHAFSDYQWL DTVGLI HS LLVPYFSWKYSHRRHHSNTGSL+RDEVFVPK+K+ I WY KYLNNPLGR + LTV TLGWPLY AFNVSGRPY + FACHF P PI Sbjct: 9 VSPSPKKSETDTLKRVPCETPPFTVGELKKAIPPHCFKRSIPRSFSYLIWDIIVASCFYYVATTYFPLLPHPLSYVAWPLYWACQGVVLTGVWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQFTLGWPLYWAFNVSGRPYPEGFACHFHPNAPI 217
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 1.526e-91 Identity = 147/197 (74.62%), Postives = 169/197 (85.79%), Query Frame = 1 Query: 190 PLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780 PL RVP +KPPFT+ Q+KKAIPPHCF+RS+L SFSYVV+DL+ AF+FY IA TY H LP P S +AWP+YW LQGC+LTGVWV+AHECGHHAFS YQW+ D VGL LHS LLVPYFSWK SHRRHHSNTGSLDRDEVFVPK K+ + W++KYLNNPLGR ++L VTLT+GWP+YLAFNVSGRPYD FA H+ PY PI Sbjct: 25 PLSRVPNTKPPFTVGQLKKAIPPHCFQRSLLTSFSYVVYDLSFAFIFY-IATTYFHLLPQPFSLIAWPIYWVLQGCLLTGVWVIAHECGHHAFSKYQWVDDVVGLTLHSTLLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWFSKYLNNPLGRAVSLLVTLTIGWPMYLAFNVSGRPYDSFASHYHPYAPI 220
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2) HSP 1 Score: 283.108 bits (723), Expect = 1.174e-75 Identity = 123/202 (60.89%), Postives = 153/202 (75.74%), Query Frame = 1 Query: 175 KVDSDPLKRVPCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780 + PL PPFT+S +K+AIPPHCF+RSV+RS Y+VHD IA++FY++AD YI LP PL+YLAWP+YW Q ILTG+WV+ HECGHHAFSDYQW+ DTVG ILHS L+ PYFSWKYSHR HH+NT SLD DEV++PK K + Y K LN+P GR++ + +T TLG+PLYL N+SG+ Y+RFA HFDP PI Sbjct: 8 RTSQKPLMERVSVDPPFTVSDLKQAIPPHCFKRSVIRSSYYIVHDAIIAYIFYFLADKYIPILPAPLAYLAWPLYWFCQASILTGLWVIGHECGHHAFSDYQWVDDTVGFILHSFLMTPYFSWKYSHRNHHANTNSLDNDEVYIPKSKAKVALYYKVLNHPPGRLLIMFITFTLGFPLYLFTNISGKKYERFANHFDPMSPI 209
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.419e-46 Identity = 90/205 (43.90%), Postives = 124/205 (60.49%), Query Frame = 1 Query: 217 PPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPL-SYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAK--------------YLNN--PLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780 P FT+ ++++ IP HCFERS LR +V DLT A + + +A T I + +PL YLAWP YW +QG + TG+WV+AHECGH +FS + L +TVG ILHS LLVPY SW+ SH +HH TG + +D+VFVPK ++ +G K +L+ P+ + + + GWP YL N SG+ Y R+ HF Y PI Sbjct: 36 PEFTIKEIRECIPAHCFERSGLRGLCHVAIDLTWASLLF-LAATQIDKFENPLIRYLAWPAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKESAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPI 239
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 7.419e-46 Identity = 90/205 (43.90%), Postives = 124/205 (60.49%), Query Frame = 1 Query: 217 PPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPL-SYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAK--------------YLNN--PLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780 P FT+ ++++ IP HCFERS LR +V DLT A + + +A T I + +PL YLAWP YW +QG + TG+WV+AHECGH +FS + L +TVG ILHS LLVPY SW+ SH +HH TG + +D+VFVPK ++ +G K +L+ P+ + + + GWP YL N SG+ Y R+ HF Y PI Sbjct: 36 PEFTIKEIRECIPAHCFERSGLRGLCHVAIDLTWASLLF-LAATQIDKFENPLIRYLAWPAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKENAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPI 239
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.988e-34 Identity = 78/193 (40.41%), Postives = 110/193 (56.99%), Query Frame = 1 Query: 205 PCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLGRVITLTVTL-TLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780 P ++PPF + ++ AIP HC+ +S LRS SYVV D+ IA IA Y+ S+ WP+YWA QG + ++V+ H+CGH +FSD L VG ILHS +LVPY W+ SHR HH N G ++ DE +VP + Y K ++ R++ TV L L +PLYL + G+ HF+PY + Sbjct: 28 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDI-IAVAALAIAAVYVD------SWFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPERV---YKKLPHST--RMLRYTVPLPMLAYPLYLCYRSPGKE----GSHFNPYSSL 204
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD3E_TOBAC (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.963e-32 Identity = 72/195 (36.92%), Postives = 108/195 (55.38%), Query Frame = 1 Query: 205 PCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVP---KQKTAIGWYAKYLNNPLGRVITLTVTLTLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780 P + PPF L++++ IP HC+ + LRS SYVV D+ IA H S+L +P+YWA+QG + ++V+ H+CGH +FSD Q L + VG ILHS +LVPY W+ SH+ HH N G+++ DE +VP K +G+ K+L + + L +P+YL G+ HF+PY + Sbjct: 24 PSAPPPFRLAEIRNVIPKHCWVKDPLRSLSYVVRDVIFVATLIGIAI-------HLDSWLFYPLYWAIQGTMFWAIFVLGHDCGHGSFSDSQLLNNVVGHILHSAILVPYHGWRISHKTHHQNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPFPL-------LAYPMYLMKRSPGKS----GSHFNPYSDL 200
BLAST of CK937131 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.774e-31 Identity = 74/194 (38.14%), Postives = 105/194 (54.12%), Query Frame = 1 Query: 205 PCSKPPFTLSQVKKAIPPHCFERSVLRSFSYVVHDLTIAFVFYYIADTYIHQLPHPLSYLAWPVYWALQGCILTGVWVVAHECGHHAFSDYQWLGDTVGLILHSCLLVPYFSWKYSHRRHHSNTGSLDRDEVFVPKQKTAIGWYAKYLNNPLG-RVITLTVTL-TLGWPLYLAFNVSGRPYDRFACHFDPYGPI 780 P ++PPF + ++ AIP HC+ +S LRS SYV D+ A +A Y S+ WP+YW QG + ++V+ H+CGH +FSD L VG ILHS +LVPY W+ SHR HH N G ++ DE +VP + Y N P R++ TV L L +P+YL + G+ HF+PY + Sbjct: 25 PSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVTRDI-FAVAALAMAAVYFD------SWFLWPLYWVAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPEKL------YKNLPHSTRMLRYTVPLPMLAYPIYLWYRSPGKE----GSHFNPYSSL 201 The following BLAST results are available for this feature:
BLAST of CK937131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937131 ID=CK937131; Name=CK937131; organism=Citrus sinensis; type=EST; length=782bpback to top |