CK937130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937130 vs. ExPASy Swiss-Prot
Match: Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.511e-27 Identity = 60/140 (42.86%), Postives = 88/140 (62.86%), Query Frame = 2 Query: 356 FYSMILPSTIHNKMLRIPPKFVGQFGDELSSVAKLAVPDGRVWQVGLTKFGRKIWFHQGWQNFVESQSISAGYFLLFKYEKNSIFRVLIFDMTACEIDYPF--------EDDMACEMCVEISEEQFKHEAELLSRKRKME 751 F+ ++LPST+ +KM+RIPP+FV G +LS V L P G + L + G +IWFH+GW F E+ SI G+FLLF+Y+KNS FRV+IF+ +ACE +YP +DD+ +EI+ ++F E + R R +E Sbjct: 30 FFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAVHIIDSDDDV-----IEITGKEFDTEHKSKKRPRDIE 164
BLAST of CK937130 vs. ExPASy Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.576e-25 Identity = 54/99 (54.55%), Postives = 66/99 (66.67%), Query Frame = 2 Query: 356 FYSMILPSTIHNKMLRIPPKFVGQFGDELSSVAKLAVPDGRVWQVGLTKFGRKIWFHQGWQNFVESQSISAGYFLLFKYEKNSIFRVLIFDMTACEIDY 652 F+ +I STI K LR+P KFV +F DELS L VPDG VW+VGL K KIWF GWQ FV+ SI GY L+F+YE NS F V IF+++ EI+Y Sbjct: 6 FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINY 104
BLAST of CK937130 vs. ExPASy Swiss-Prot
Match: Y3896_ARATH (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.040e-24 Identity = 49/102 (48.04%), Postives = 72/102 (70.59%), Query Frame = 2 Query: 356 FYSMILPSTIHNKMLRIPPKFVGQFGDELSSVAKLAVPDGRVWQVGLTKFGRKIWFHQGWQNFVESQSISAGYFLLFKYEKNSIFRVLIFDMTACEIDYPFE 661 F+ ++LPST+ +KM++IPP+FV G +LS V L P G + L + G +IWFH+GW F E+ SI G+FLLF+Y++NS FRV+IF+++ACE YP + Sbjct: 30 FFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLD 131
BLAST of CK937130 vs. ExPASy Swiss-Prot
Match: Y1475_ARATH (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 8.531e-19 Identity = 45/107 (42.06%), Postives = 68/107 (63.55%), Query Frame = 2 Query: 344 TSSMFYSMILPSTIHNKMLRIPPKFVGQFGDELSSVAKLAVPDGRVWQVGLTKFGRKIWFHQGWQNFVESQSISAGYFLLFKYEKNSIFRVLIFDMTACEIDYPFED 664 T F +IL S I KM+++P +FV +FG +L+ L P G + + + G ++WF +GW F E+ S+S G+FL F YE +S FRV+IFD++A EI+YP +D Sbjct: 30 TVKKFIKIILLSRIIEKMMKVPARFV-RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDD 135 The following BLAST results are available for this feature:
BLAST of CK937130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK937130 ID=CK937130; Name=CK937130; organism=Citrus sinensis; type=EST; length=828bpback to top |