CK937125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937125 vs. ExPASy Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 4.833e-86 Identity = 172/254 (67.72%), Postives = 188/254 (74.02%), Query Frame = 2 Query: 113 SFLQAPMAALVPSTSVHS------LRSKSTRSLKTF-------CSAKIPNPMPAHINPNDPFLSKLXXXXXXSPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSATYNEHRXXXXXXXXXXXXXHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRA 835 S LQA M +L+P +S S S R+LKTF SAKIP P INP DPFLS L SPE +NRP N+ PYLDI+DSP LM+SPAQVERS YNEHR GRIVYIGMPLVPAVTELVVAELMYLQW+DPK PIY+YINSTGTTRDDGE+VGMESEGFAIYD+LMQ+K EVHTV VGAAIG ACLLL+AGTKGKRFMMPHAK MIQQPR+PSSGL+PASDVLIRA Sbjct: 3 SCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPP---INPKDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDVLIRA 253
BLAST of CK937125 vs. ExPASy Swiss-Prot
Match: CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803) GN=clpR PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.338e-27 Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 464 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRA 835 RIVY+GMPL + VT+L++A+L+YLQ+ DP PIY YINSTGT+ G++VG E+E FAI DTL +K VHT+ +G A+G A ++L++GTKG R +PHA I++ Q R + G A+D+ IRA Sbjct: 31 RIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYRASLPHATIVLNQNRTGAQG--QATDIQIRA 162
BLAST of CK937125 vs. ExPASy Swiss-Prot
Match: CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) GN=clpR PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.338e-27 Identity = 62/134 (46.27%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 464 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRA 835 RI+Y+GMPL + VTEL++A+L+YL++ +P+ PIY YINSTGT+ G+++G E+E FAI DT+ +K VHT+ +G A+G A ++L+ GT G R +PHA I++ QPR + G ASD+ IRA Sbjct: 33 RIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVLNQPRTGAQG--QASDIQIRA 164
BLAST of CK937125 vs. ExPASy Swiss-Prot
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.892e-27 Identity = 88/234 (37.61%), Postives = 125/234 (53.42%), Query Frame = 2 Query: 101 AMSTSF--LQAPMAALVPSTSVHSLRSK----STRSLKTFCSAKIPNPMPAHINPNDPFLSKLXXXXXXSPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSATYNEHRXXXXXXXXXXXXXHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQP 784 A +TSF L+A +A++PS S +LRSK S+ SL+ S +P +D +KL +P F + G + + + + P S + RIVY+GM LVP+VTEL++AE +YLQ+ D + PIYLYINSTGTT+ +GE +G ++E FAIYD + +K + T+ VG A G A LLL AG KG R +P + IMI+QP Sbjct: 6 ATATSFTTLRARTSAIIPS-STRNLRSKPRFSSSSSLRASLSNGFLSPYTGGSISSDLCGAKLRAESL-NPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPPDLASYLFKN-----------------RIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-NGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQP 219
BLAST of CK937125 vs. ExPASy Swiss-Prot
Match: CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.808e-24 Identity = 60/125 (48.00%), Postives = 84/125 (67.20%), Query Frame = 2 Query: 464 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL-PSSGLLPASDVLIRA 835 RI Y+GMP+VPAVTEL+VA+ M+L + +P PIYLYINS GT + E+VG E+E +AI DT+ K +V+T+ G A G A +LL+ G KG R + PH+ + P++ SSG A D+ I+A Sbjct: 180 RICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNRSSG--AAIDMWIKA 302
BLAST of CK937125 vs. ExPASy Swiss-Prot
Match: CLPP_THESQ (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp. (strain RQ2) GN=clpP PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.921e-23 Identity = 58/122 (47.54%), Postives = 78/122 (63.93%), Query Frame = 2 Query: 464 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLI 829 RIV++G P+ V LV+A+L++L+ DP +YLYINS G G + G AIYDT+ +KC+V T+ VG A MA +LLAAG KGKR+ +P+A+IMI QP + G PA DV I Sbjct: 37 RIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG--PAKDVEI 147
BLAST of CK937125 vs. ExPASy Swiss-Prot
Match: CLPP_THEP1 (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=clpP PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.921e-23 Identity = 58/122 (47.54%), Postives = 78/122 (63.93%), Query Frame = 2 Query: 464 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLI 829 RIV++G P+ V LV+A+L++L+ DP +YLYINS G G + G AIYDT+ +KC+V T+ VG A MA +LLAAG KGKR+ +P+A+IMI QP + G PA DV I Sbjct: 37 RIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG--PAKDVEI 147
BLAST of CK937125 vs. ExPASy Swiss-Prot
Match: CLPP_THEMA (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga maritima GN=clpP PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.921e-23 Identity = 58/122 (47.54%), Postives = 78/122 (63.93%), Query Frame = 2 Query: 464 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLI 829 RIV++G P+ V LV+A+L++L+ DP +YLYINS G G + G AIYDT+ +KC+V T+ VG A MA +LLAAG KGKR+ +P+A+IMI QP + G PA DV I Sbjct: 37 RIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG--PAKDVEI 147
BLAST of CK937125 vs. ExPASy Swiss-Prot
Match: CLPP_THEYD (ATP-dependent Clp protease proteolytic subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=clpP PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.398e-22 Identity = 51/107 (47.66%), Postives = 72/107 (67.29%), Query Frame = 2 Query: 464 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQP 784 RI++IG + V +V+A+L++LQ DP+ I++YINS G GM S G AIYDT+ +K ++ T +G A MAC+LLAAGTKGKRF +PH+++MI QP Sbjct: 28 RIIFIGTEINDHVANVVIAQLLFLQTEDPEKDIHIYINSPG---------GMVSSGLAIYDTMQYVKPDIATYCIGQASSMACVLLAAGTKGKRFALPHSRVMIHQP 125
BLAST of CK937125 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.069e-20 Identity = 53/124 (42.74%), Postives = 76/124 (61.29%), Query Frame = 2 Query: 464 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRA 835 RI+++G + + L+VA+++YL+ DP+ IYLYINS G G G AIYDT+ ++ +V T+ +G A M LLA GTKGKR +PHA+IMI QP + G PA+D+ I+A Sbjct: 26 RIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPG---------GSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQG--PATDIEIQA 138 The following BLAST results are available for this feature:
BLAST of CK937125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937125 ID=CK937125; Name=CK937125; organism=Citrus sinensis; type=EST; length=836bpback to top |