CK937116

Overview
NameCK937116
Unique NameCK937116
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK937116 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.804e-12
Identity = 79/270 (29.26%), Postives = 117/270 (43.33%), Query Frame = 2
Query:   35 MIFLLLLSVFLRGASSSILSEDTPISFSFPSFAKDSCDNKTLICYG--AIESSG-ALSITPGPPPNLPIR-KVGRVLYGKPLSLQRSFID------TTITIKISRHQNYTDRAGDGMTFIFASDKNGPSAEGVGEYLGLQSSPGDKFPPL----AVELGTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDV--DLKSGRAIQVRIYYNPDFGQLSVYAAYSGETLVK--VVEKPINLSDIIPTPVYVGFTAATGDFLESHEVINWTFNS 790
            + F+ L  + L   +SS       +SF+F +F  D  D   LI  G   I S G +L +T       P+R  VGR LY  PL L  S  +      TT T  +S   + T+  GDG+ F  A  +        G  LGL S        L    AVE  T +N N                + N + S   V    ++G     +I YN D  +LSV ++Y      +   V   ++L   +P  V VGF+ +TG ++++H +++WTFNS
Sbjct:   20 LAFITLFLMLLNRVNSS-----DSLSFTFDNFRPDQRD---LILQGDAKISSGGDSLQLTKTDTSGKPVRGSVGRALYYTPLHLWDSSTNRLASFQTTFTFVLS---SPTNNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNN------WDPSHRHIGIDVNTIKSSATVRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGGYVQNHNILSWTFNS 272          
BLAST of CK937116 vs. ExPASy Swiss-Prot
Match: LECS_SOPJA (Seed lectin OS=Sophora japonica PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.579e-11
Identity = 78/273 (28.57%), Postives = 114/273 (41.76%), Query Frame = 2
Query:   14 VALAEQKMIFLLLLSVFLRGASSSILSEDTPISFSFPSFAKDSCDNKTLICYG--AIESSGALSITPGPPPNLPI-RKVGRVLYGKPLSLQRSFIDTTITIKISRH----QNYTDRAGDGMTFIFASDKNGPSAEGVGEYLGLQSSPG--DKFPPLAVELGTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLDVDL--KSGRAIQVRIYYNPDFGQLSVYAAYSGETLVKVVEKPINLSDIIPTPVYVGFTAATG---DFLESHEVINWTFNS 790
            V LA     FLLLL+   +  S+ ILS      FSFP FA +  D   L+  G   + S G L +T      +PI    GR LY  P+ +         +   S           ++ DG+ F  A   N     G G +LGL  S G    +  +AV+  T +N                  + N +NS   V    ++G    V I Y      L+V   Y       ++   ++L  I+P  V VGFTAATG    ++E+H+V++W+F S
Sbjct:   19 VVLAISITFFLLLLN---KVNSAEILS------FSFPKFASNQED---LLLQGDALVSSKGELQLTT-VENGVPIWNSTGRALYYAPVHIWDKSTGRVASFATSFSFVVKAPVASKSADGIAFFLAPPNNQIQGPG-GGHLGLFHSSGYNSSYQIIAVDFDTHINA-------WDPNTRHIGIDVNSINSTKTVTWGWQNGEVANVLISYQAATETLTVSLTYPSSQTSYILSAAVDLKSILPEWVRVGFTAATGLTTQYVETHDVLSWSFTS 270          
BLAST of CK937116 vs. ExPASy Swiss-Prot
Match: LEC_ERYCG (Lectin OS=Erythrina crista-galli PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.898e-11
Identity = 69/241 (28.63%), Postives = 102/241 (42.32%), Query Frame = 2
Query:  107 ISFSFPSFAKDSCDNKTLICYGAIESSGALSITPGPPPNLPI-RKVGRVLYGKPLSLQRSFIDTTITIK----ISRHQNYT-DRAGDGMTFIFASDKNGPSAEGVGEYLGL--QSSPGDKFPPLAVELGTCLNKNLXXXXXXXXXXXXXXXESNPVNSLLD--VDLKSGRAIQVRIYYNPDFGQLSVYAAYSGETLVKVVEKPINLSDIIPTPVYVGFTAATG---DFLESHEVINWTFNS 790
            ISFSF  F   + DN TL     I  SG L +T      +P     GR LY KP+ +  S   T  + +     S  Q YT     DG+ F     K+ P A+G G YLG+   S   + +  LAVE  T  N                  + N + S+      L +G+   V I Y+     L V   Y     +  + + +++  ++P  V VG + ATG   D  E+H+V +W+F +
Sbjct:    4 ISFSFSEFEPGN-DNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKP-AQGYG-YLGVFNNSKQDNSYQTLAVEFDTFSNP------WDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQA 235          
The following BLAST results are available for this feature:
BLAST of CK937116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
LEC2_CLALU1.804e-1229.26Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1[more]
LECS_SOPJA7.579e-1128.57Seed lectin OS=Sophora japonica PE=2 SV=1[more]
LEC_ERYCG9.898e-1128.63Lectin OS=Erythrina crista-galli PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCGF1004514_A06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IF_A06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937116 ID=CK937116; Name=CK937116; organism=Citrus sinensis; type=EST; length=908bp
GGGGATTCAATAAGTAGCCCTCGCAGAACAAAAAATGATTTTCCTACTAC
TCCTCTCCGTTTTTCTTCGCGGAGCTTCTTCATCAATCCTTTCCGAAGAC
ACACCTATTAGCTTCTCATTTCCCTCATTCGCCAAAGACAGTTGTGACAA
TAAGACCCTCATTTGCTACGGAGCGATTGAAAGTTCCGGCGCCTTAAGCA
TCACACCAGGCCCTCCACCAAACCTGCCGATCAGAAAGGTTGGACGGGTT
TTATACGGCAAGCCTCTGAGTTTACAGCGATCTTTTATTGATACCACCAT
CACCATTAAGATCTCACGCCATCAGAATTACACTGATCGTGCCGGAGATG
GCATGACGTTCATTTTTGCAAGCGATAAAAACGGTCCATCAGCAGAGGGC
GTCGGCGAATATCTTGGACTGCAGTCTTCACCAGGCGATAAATTTCCTCC
ATTAGCCGTGGAGCTGGGCACATGCCTGAACAAGAACCTGAATGATCCAG
ATGATAACCATATTGGCATCGACATAAACGGAATCGAATCAAATCCAGTT
AATAGTCTGCTTGACGTTGATCTCAAAAGTGGACGAGCAATCCAGGTTCG
AATTTATTACAATCCAGACTTTGGACAACTCTCTGTTTATGCGGCATATT
CGGGGGAAACACTTGTGAAGGTGGTTGAAAAACCCATTAACCTGTCAGAT
ATAATTCCAACGCCCGTCTATGTTGGATTCACAGCAGCTACGGGGGACTT
TTTAGAAAGCCATGAGGTTATAAATTGGACCTTCAACTCGTTCCCAGTGC
CGCCTTCTCTCAAGGAGAAAAACCTGGTGATGCCAATATAATTCTAAACC
GTCCTTGAAAAACCATGTCACATAAATTATAATCAATAATAATTAATATC
ACCAATAA
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