CK937095

Overview
NameCK937095
Unique NameCK937095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length724
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11469 contig Csv1_Contig11469:1..723. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937095 vs. ExPASy Swiss-Prot
Match: HEBP2_HUMAN (Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.943e-23
Identity = 65/168 (38.69%), Postives = 89/168 (52.98%), Query Frame = 1
Query:  220 FEIRHYNSSMWMSTSPIQDISLVQATRTGFLQLFDYIQGKNEYEQTIEMTAPVITEVLPSDGPFCESSFTVSFYVPKVNQANPPP--AKGLHLQQWKPTYAAVRQFSGFVSDSNIGEEAAALQASLAGTEWAAAIEKRHAEDSTSSYIVAQYNSPFEFYNKVNEIWLL 717
            +EIRHY  + W+STS ++ +    A +TGF +L  YIQGKNE E  I+MTAPV + V P  GPF ES+ T+S Y+P   Q +PP      + ++        VR F GF S     E+   L AS+   +     EK         Y  A YNSP +  N+ NE+WL+
Sbjct:   38 YEIRHYGPAKWVSTS-VESMDWDSAIQTGFTKLNSYIQGKNEKEMKIKMTAPVTSYVEPGSGPFSESTITISLYIPSEQQFDPPRPLESDVFIEDRAEMTVFVRSFDGFSSAQKNQEQLLTL-ASILREDGKVFDEK--------VYYTAGYNSPVKLLNRNNEVWLI 195          
BLAST of CK937095 vs. ExPASy Swiss-Prot
Match: HEBP2_MOUSE (Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.259e-21
Identity = 61/168 (36.31%), Postives = 91/168 (54.17%), Query Frame = 1
Query:  220 FEIRHYNSSMWMSTSPIQDISLVQATRTGFLQLFDYIQGKNEYEQTIEMTAPVITEVLPSDGPFCESSFTVSFYVPKVNQANPP-PAKG-LHLQQWKPTYAAVRQFSGFVSDSNIGEEAAALQASLAGTEWAAAIEKRHAEDSTSSYIVAQYNSPFEFYNKVNEIWLL 717
            +EIRHY  + W+ST  ++ +    A +TGF +L  YIQGKNE E  I++TAPV + V P   PF ES+ T+S Y+P   Q +PP P++  + ++        VR F GF S     E+   L A++   E     EK         +  A Y+SPF+  ++ NE+WL+
Sbjct:   38 YEIRHYGPAKWVSTC-VESLDWDSAIQTGFTKLNGYIQGKNEKEMKIKLTAPVTSYVEPGSSPFSESTITISLYIPSEQQPDPPRPSESDVFIEDRAEMTVFVRSFDGFSSGQKNQEQLLTL-ANILREEGKVFNEK--------VFYTAGYSSPFQLLDRNNEVWLI 195          
The following BLAST results are available for this feature:
BLAST of CK937095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
HEBP2_HUMAN5.943e-2338.69Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE... [more]
HEBP2_MOUSE4.259e-2136.31Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004514_C03 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937095 ID=CK937095; Name=CK937095; organism=Citrus sinensis; type=EST; length=724bp
GGGGATTATCATCACCATCGAGCACCCAGAAGTCTCTCCACTCAAAAAAC
AAAAATGGCTGCAGGCTTGAGCATGTTAAAGTTTTCAGTTCTTCTCGGCC
TACTCTCAAATCTGAACTTGGGTTTATGGCCTGAATCTTCAAAGGGGTTG
AAAATATTTCCACCAACATGCAACAGAATTGAGTGTCCAAGCTTTGAGAC
CGTTCATGTTGGCAATGGCTTTGAAATTCGTCACTATAATTCGTCCATGT
GGATGTCTACTTCCCCTATTCAAGATATCTCTCTAGTTCAAGCTACCAGA
ACTGGCTTTCTCCAGCTATTTGATTACATTCAAGGAAAGAACGAATATGA
GCAAACAATAGAGATGACAGCTCCAGTAATCACTGAAGTTTTACCAAGTG
ATGGACCCTTCTGTGAATCTTCATTCACCGTTAGCTTTTACGTCCCAAAG
GTGAACCAAGCCAACCCACCTCCAGCAAAAGGCCTCCATCTCCAACAATG
GAAACCAACGTACGCGGCTGTGAGACAGTTCAGCGGGTTTGTATCAGACT
CGAACATTGGTGAAGAAGCTGCTGCATTGCAAGCCAGCCTTGCAGGCACT
GAATGGGCTGCAGCCATTGAGAAAAGACATGCAGAAGACTCCACTTCAAG
TTACATTGTTGCACAGTATAACTCTCCCTTTGAATTTTACAACAAAGTGA
ATGAGATATGGCTTTTGTTTGATN
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