CK937090

Overview
NameCK937090
Unique NameCK937090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length645
Libraries
Library NameType
Developing fruit flavedo at 80 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10366 contig Csv1_Contig10366:744..1386. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK937090 vs. ExPASy Swiss-Prot
Match: P5CS_SOLLC (Delta-1-pyrroline-5-carboxylate synthetase OS=Solanum lycopersicum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.429e-67
Identity = 121/164 (73.78%), Postives = 140/164 (85.37%), Query Frame = 2
Query:    5 KDLACNGALNELVVELQHEGVGLFGGPRAGKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQ 496
            KDLA NG LN+L+VELQ +GV L+GGP+A  LL IPE R F HEY+S+ CTVE+V+DV AAIDHIHQHGSAHTD I+ EDQ+VAE FL QVDSAAVFHNASTRF DG RFGLGAEVGIST RIHARGPVGVEGLLTT+W+ RG+G +VDGD+ +VY+HK+L  Q
Sbjct:  553 KDLAQNGGLNDLIVELQTKGVSLYGGPKASSLLMIPEARTFRHEYSSLACTVEVVEDVYAAIDHIHQHGSAHTDSIITEDQEVAEVFLRQVDSAAVFHNASTRFSDGFRFGLGAEVGISTGRIHARGPVGVEGLLTTKWLARGSGQIVDGDKSIVYSHKDLTQQ 716          
BLAST of CK937090 vs. ExPASy Swiss-Prot
Match: P5CS2_ARATH (Delta-1-pyrroline-5-carboxylate synthetase B OS=Arabidopsis thaliana GN=P5CSB PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.184e-67
Identity = 124/161 (77.02%), Postives = 136/161 (84.47%), Query Frame = 2
Query:    5 KDLACNGALNELVVELQHEGVGLFGGPRAGKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNL 487
            KDL  NG L++L+  LQ +GV L+GGPRA   L IPET+ FHHEY+S  CTVEIV+DV  AIDHIHQHGSAHTDCIV ED +VAE FL QVDSAAVFHNASTRF DG RFGLGAEVGISTSRIHARGPVGVEGLLTTRWI+RG G VVDGD G+VYTHK+L
Sbjct:  553 KDLEQNGFLDDLIYVLQTKGVTLYGGPRASAKLNIPETKSFHHEYSSKACTVEIVEDVYGAIDHIHQHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWIMRGKGQVVDGDNGIVYTHKDL 713          
BLAST of CK937090 vs. ExPASy Swiss-Prot
Match: P5CS_ACTDE (Delta-1-pyrroline-5-carboxylate synthetase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 9.264e-67
Identity = 122/161 (75.78%), Postives = 138/161 (85.71%), Query Frame = 2
Query:    5 KDLACNGALNELVVELQHEGVGLFGGPRAGKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNL 487
            KDL  NG L+EL+VELQ +GV + GGPRA  LL IPE R  HHEY+S+ CT+EIVDDV AAIDHIH+HGSAHTD I+ ED +VAE FL QVDS++V HNASTRF DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI RG+G VVDGD+G+VYTHK+L
Sbjct:  553 KDLVQNGCLDELIVELQIKGVVIHGGPRASSLLHIPEARSLHHEYSSLACTIEIVDDVYAAIDHIHRHGSAHTDSIITEDHEVAEIFLRQVDSSSVLHNASTRFSDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIARGSGQVVDGDKGIVYTHKDL 713          
BLAST of CK937090 vs. ExPASy Swiss-Prot
Match: P5CS1_ARATH (Delta-1-pyrroline-5-carboxylate synthetase A OS=Arabidopsis thaliana GN=P5CSA PE=1 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 4.598e-66
Identity = 119/165 (72.12%), Postives = 136/165 (82.42%), Query Frame = 2
Query:    5 KDLACNGALNELVVELQHEGVGLFGGPRAGKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQS 499
            KDL  N  LNEL+  LQ  GV L+GGPRA K+L IPE R F+HEY +  CTVE+V+DV  AIDHIH+HGSAHTDCIV ED +VAE FL QVDSAAVFHNASTRF DG RFGLGAEVG+ST RIHARGPVGVEGLLTTRWI+RG G VVDGD G+VYTH+++ +Q+
Sbjct:  553 KDLEQNAVLNELIFALQSNGVTLYGGPRASKILNIPEARSFNHEYCAKACTVEVVEDVYGAIDHIHRHGSAHTDCIVTEDHEVAELFLRQVDSAAVFHNASTRFSDGFRFGLGAEVGVSTGRIHARGPVGVEGLLTTRWIMRGKGQVVDGDNGIVYTHQDIPIQA 717          
BLAST of CK937090 vs. ExPASy Swiss-Prot
Match: P5CS_MESCR (Delta-1-pyrroline-5-carboxylate synthetase OS=Mesembryanthemum crystallinum GN=P5CS PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 4.303e-64
Identity = 122/165 (73.94%), Postives = 138/165 (83.64%), Query Frame = 2
Query:    5 KDLACNGALNELVVELQHEGVGLFGGPRAGKL--LKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLAL 493
            KDLA NG LN+L+V+L+ EGV +FGGPR   L    I  T+ F+ EY+S  CTVEIVDDV AAI+HI+ HGSAHTDCI+AED KVAETFL  VDSAAV HNASTRFCDG RFGLGAEVGISTSRIHARGPVGVEGLLTTRW+L+G+G VV GD+GVVYTHK+L L
Sbjct:  550 KDLAENGGLNDLIVDLRTEGVTMFGGPRIDALQEFNIQATQTFNREYSSPACTVEIVDDVYAAIEHINHHGSAHTDCIIAEDHKVAETFLQLVDSAAVLHNASTRFCDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWVLKGSGQVVHGDKGVVYTHKDLPL 714          
BLAST of CK937090 vs. ExPASy Swiss-Prot
Match: P5CS_ORYSJ (Delta-1-pyrroline-5-carboxylate synthetase OS=Oryza sativa subsp. japonica GN=P5CS PE=2 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 9.587e-64
Identity = 119/164 (72.56%), Postives = 137/164 (83.54%), Query Frame = 2
Query:    5 KDLACNGALNELVVELQHEGVGLFGGPRAGKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQGVVYTHKNLALQ 496
            KDL  +  L++++V L+ EGV ++GGP A K L  P+   FHHEY+SM CTVE VDDV++AIDHIH++GSAHTDCIV  D KVAETFL +VDSAAVFHNASTRF DGARFGLGAEVGIST RIHARGPVGVEGLLTTRWILRG G VV+GD+ VVYTHK+L LQ
Sbjct:  553 KDLMKSPGLDDILVALKTEGVNIYGGPIAHKALGFPKAVSFHHEYSSMACTVEFVDDVQSAIDHIHRYGSAHTDCIVTTDDKVAETFLRRVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGRGQVVNGDKDVVYTHKSLPLQ 716          
BLAST of CK937090 vs. ExPASy Swiss-Prot
Match: ALH13_CAEEL (Probable delta-1-pyrroline-5-carboxylate synthetase OS=Caenorhabditis elegans GN=alh-13 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.630e-42
Identity = 90/165 (54.55%), Postives = 109/165 (66.06%), Query Frame = 2
Query:    5 KDLACNGALNELVVELQHEGVGLFGGPRAGKLLKI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQG--VVYTHKNL 487
            KDLA     + L    + EGV L  GP+   LLK   P       EY S+ CT+E+VD+V  A+ HI ++GS HT+ I+ E+   AE FL  VDSA  FHNASTRF DG RFGLGAEVGIST RIHARGPVGVEGLLTT+W+LRG GH+V+  +     Y H+NL
Sbjct:  616 KDLATAPFFDSLCSMFKAEGVKLHAGPKLAALLKFAPPPAESMSFEYGSLECTLEVVDNVEEAVAHIIRYGSGHTESIITENTNTAEHFLKHVDSACAFHNASTRFADGYRFGLGAEVGISTGRIHARGPVGVEGLLTTKWLLRGEGHLVEDFKNGKYSYLHENL 780          
BLAST of CK937090 vs. ExPASy Swiss-Prot
Match: P5CS_HUMAN (Delta-1-pyrroline-5-carboxylate synthetase OS=Homo sapiens GN=ALDH18A1 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.318e-40
Identity = 88/168 (52.38%), Postives = 113/168 (67.26%), Query Frame = 2
Query:    5 KDLACNGALNELVVELQHEGVGLFGGPRAGKLLKIP--ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQG-VVYTHKNLAL 493
            +DL      ++++  L+ E V +  GP+    L     E +    EY  +   +E+VD+V+ AIDHIH++GS+HTD IV ED+  AE FL  VDSA VF NASTRF DG RFGLGAEVGISTSRIHARGPVG+EGLLTT+W+LRG  HVV    + G + Y H+NL +
Sbjct:  622 RDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKDHVVSDFSEHGSLKYLHENLPI 789          
BLAST of CK937090 vs. ExPASy Swiss-Prot
Match: P5CS_MOUSE (Delta-1-pyrroline-5-carboxylate synthetase OS=Mus musculus GN=Aldh18a1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.333e-40
Identity = 88/166 (53.01%), Postives = 112/166 (67.47%), Query Frame = 2
Query:    5 KDLACNGALNELVVELQHEGVGLFGGPRAGKLLKIP--ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQG-VVYTHKNL 487
            +DL      ++++  L+ E V +  GP+    L     E +    EY  +   +E+VD V+ AIDHIH++GS+HTD IV E++K AE FL  VDSA VF NASTRF DG RFGLGAEVGISTSRIHARGPVG+EGLLTT+W+LRG  HVV    + G + Y H+NL
Sbjct:  622 RDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLEVCIEVVDSVQEAIDHIHKYGSSHTDVIVTENEKTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGQDHVVSDFSEHGSLKYLHENL 787          
BLAST of CK937090 vs. ExPASy Swiss-Prot
Match: P5CS_PONAB (Delta-1-pyrroline-5-carboxylate synthetase OS=Pongo abelii GN=ALDH18A1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.261e-39
Identity = 87/168 (51.79%), Postives = 113/168 (67.26%), Query Frame = 2
Query:    5 KDLACNGALNELVVELQHEGVGLFGGPRAGKLLKIP--ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVD--GDQG-VVYTHKNLAL 493
            +DL      ++++  L+ E V +  GP+    L     E +    EY  +   +E+VD+V+ AIDHIH++GS+HTD IV E++  AE FL  VDSA VF NASTRF DG RFGLGAEVGISTSRIHARGPVG+EGLLTT+W+LRG  HVV    + G + Y H+NL +
Sbjct:  622 RDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTENENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKDHVVSDFSEHGSLKYLHENLPI 789          
The following BLAST results are available for this feature:
BLAST of CK937090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
P5CS_SOLLC1.429e-6773.78Delta-1-pyrroline-5-carboxylate synthetase OS=Sola... [more]
P5CS2_ARATH3.184e-6777.02Delta-1-pyrroline-5-carboxylate synthetase B OS=Ar... [more]
P5CS_ACTDE9.264e-6775.78Delta-1-pyrroline-5-carboxylate synthetase OS=Acti... [more]
P5CS1_ARATH4.598e-6672.12Delta-1-pyrroline-5-carboxylate synthetase A OS=Ar... [more]
P5CS_MESCR4.303e-6473.94Delta-1-pyrroline-5-carboxylate synthetase OS=Mese... [more]
P5CS_ORYSJ9.587e-6472.56Delta-1-pyrroline-5-carboxylate synthetase OS=Oryz... [more]
ALH13_CAEEL4.630e-4254.55Probable delta-1-pyrroline-5-carboxylate synthetas... [more]
P5CS_HUMAN3.318e-4052.38Delta-1-pyrroline-5-carboxylate synthetase OS=Homo... [more]
P5CS_MOUSE4.333e-4053.01Delta-1-pyrroline-5-carboxylate synthetase OS=Mus ... [more]
P5CS_PONAB1.261e-3951.79Delta-1-pyrroline-5-carboxylate synthetase OS=Pong... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004514_D06 Developing fruit flavedo at 80 DAFB Citrus sinensis cDNA clone F80DAB0002_IF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK937090 ID=CK937090; Name=CK937090; organism=Citrus sinensis; type=EST; length=645bp
GGGCAAGGATTTAGCATGCAATGGTGCACTCAATGAGCTTGTTGTAGAAC
TTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGAGCAGGTAAATTA
CTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTACAACTCAATGGT
TTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTATTGACCATATTC
ATCAACATGGAAGTGCCCATACTGATTGCATTGTTGCAGAAGATCAAAAA
GTTGCTGAAACATTTTTATGTCAAGTTGACAGTGCTGCAGTATTTCATAA
TGCAAGTACACGATTCTGTGATGGAGCACGATTTGGACTTGGTGCAGAGG
TTGGAATAAGCACAAGCAGGATTCATGCTCGCGGTCCAGTCGGAGTTGAA
GGATTGCTAACTACTCGATGGATATTGAGAGGGAATGGACACGTCGTAGA
TGGTGATCAAGGAGTCGTCTATACCCACAAGAATCTTGCCTTGCAATCCT
AGTAACTTATGGTTCTAAACCATGTCATTTGTATAATATTATGCTAGCTG
CTTCTGAGACTCTATTTACTTGGTGTATATTTATTGCACTTTGCTGATGG
TTATTTATTAAGATCTTTAGTTTTTATTACTTGGATCTTGCTTGG
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